BLASTX nr result
ID: Coptis25_contig00011415
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00011415 (558 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFJ66197.1| hypothetical protein 7G9.16 [Boechera stricta] 54 2e-15 ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777... 54 3e-13 ref|XP_004154255.1| PREDICTED: uncharacterized protein LOC101219... 51 1e-12 dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 64 3e-12 gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 64 1e-11 >gb|AFJ66197.1| hypothetical protein 7G9.16 [Boechera stricta] Length = 671 Score = 54.3 bits (129), Expect(2) = 2e-15 Identities = 25/64 (39%), Positives = 38/64 (59%) Frame = +3 Query: 366 RLIMDINDLEIKEALFSMDDNKTPRPDGFNSFFFKKTWDIVGEEFSLAVKHMLNHKSIQK 545 +L+ ++ EIK LFSM NK+ PDGF FF+ +W I+G EF +A + H + + Sbjct: 406 QLVARVSPEEIKHTLFSMPKNKSSGPDGFTPEFFQASWAIIGPEFVIAFQSYFLHGFMPR 465 Query: 546 GTNS 557 G N+ Sbjct: 466 GVNA 469 Score = 53.1 bits (126), Expect(2) = 2e-15 Identities = 24/74 (32%), Positives = 42/74 (56%) Frame = +1 Query: 145 ELCDLMLMEEYDLMQRTNTDWLSFGDKCNAFFNNSVKEKKTRNNIWSILDSQGVQQDGKS 324 +L L MEE Q+++ +WL GD+ AFF SV ++++NNI+S+ G+ S Sbjct: 304 DLNRLASMEEKFYQQKSHINWLQNGDRNTAFFQRSVTSRRSKNNIYSVNSRAGITLSSPS 363 Query: 325 KVALAFISFYKDLL 366 + F+ +++D L Sbjct: 364 DIKQEFVDYFQDFL 377 >ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max] Length = 1324 Score = 54.3 bits (129), Expect(2) = 3e-13 Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 2/82 (2%) Frame = +1 Query: 127 ERIRRT--ELCDLMLMEEYDLMQRTNTDWLSFGDKCNAFFNNSVKEKKTRNNIWSILDSQ 300 +R+R+ ++ +L MEE LMQR DW+ GD N+FF+ +K + R NI+ + + Sbjct: 531 DRVRKLTKDVINLNEMEEKMLMQRAKVDWIRKGDGNNSFFHAIIKSRNNRRNIYMLQKTD 590 Query: 301 GVQQDGKSKVALAFISFYKDLL 366 G + +S++ + FYK L+ Sbjct: 591 GTLLENQSEIEDEIMDFYKKLM 612 Score = 45.8 bits (107), Expect(2) = 3e-13 Identities = 22/63 (34%), Positives = 37/63 (58%) Frame = +3 Query: 369 LIMDINDLEIKEALFSMDDNKTPRPDGFNSFFFKKTWDIVGEEFSLAVKHMLNHKSIQKG 548 L+ +I + +I+ AL + D+K+P DGF + FFK +W IV E+ A+ N + +G Sbjct: 641 LVSNITEQDIERALKGIGDDKSPGIDGFGAKFFKASWCIVKEDVIAAILEFFNIGRLYRG 700 Query: 549 TNS 557 N+ Sbjct: 701 FNN 703 >ref|XP_004154255.1| PREDICTED: uncharacterized protein LOC101219773 [Cucumis sativus] Length = 209 Score = 51.2 bits (121), Expect(2) = 1e-12 Identities = 22/55 (40%), Positives = 30/55 (54%) Frame = +3 Query: 393 EIKEALFSMDDNKTPRPDGFNSFFFKKTWDIVGEEFSLAVKHMLNHKSIQKGTNS 557 E++ LFSM+ K P PDG++ FFK W +VGE F V H +G N+ Sbjct: 138 EVRRVLFSMEGGKAPGPDGYSGGFFKGAWTVVGEGFCDVVLHFFETNYFPQGVNT 192 Score = 46.6 bits (109), Expect(2) = 1e-12 Identities = 20/67 (29%), Positives = 38/67 (56%) Frame = +1 Query: 166 MEEYDLMQRTNTDWLSFGDKCNAFFNNSVKEKKTRNNIWSILDSQGVQQDGKSKVALAFI 345 MEE + Q+ WL D+ AFF+ SV+ +++ N + S++D G + +V + Sbjct: 34 MEEAAMRQKLQIRWLKLDDQNTAFFHGSVRSRQSSNALRSVIDPDGNRLTNHDQVTQVVV 93 Query: 346 SFYKDLL 366 +++KD+L Sbjct: 94 NYFKDIL 100 >dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1223 Score = 63.5 bits (153), Expect(2) = 3e-12 Identities = 29/63 (46%), Positives = 41/63 (65%) Frame = +3 Query: 369 LIMDINDLEIKEALFSMDDNKTPRPDGFNSFFFKKTWDIVGEEFSLAVKHMLNHKSIQKG 548 LI + EI++ LF M +K+P PDG+ S FFK TW+I+G+EF+LAV+ + KG Sbjct: 449 LIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKG 508 Query: 549 TNS 557 NS Sbjct: 509 INS 511 Score = 33.1 bits (74), Expect(2) = 3e-12 Identities = 15/68 (22%), Positives = 32/68 (47%) Frame = +1 Query: 163 LMEEYDLMQRTNTDWLSFGDKCNAFFNNSVKEKKTRNNIWSILDSQGVQQDGKSKVALAF 342 ++EE L Q++ W GD+ F+ + ++ N I IL + G+ + ++ Sbjct: 351 ILEEKYLKQKSKLHWCQVGDQNTKAFHRAAAAREAHNTIREILSNDGIVKTKGDEIKAEA 410 Query: 343 ISFYKDLL 366 F+++ L Sbjct: 411 ERFFREFL 418 >gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1449 Score = 63.5 bits (153), Expect(2) = 1e-11 Identities = 29/63 (46%), Positives = 41/63 (65%) Frame = +3 Query: 369 LIMDINDLEIKEALFSMDDNKTPRPDGFNSFFFKKTWDIVGEEFSLAVKHMLNHKSIQKG 548 L ++ EI+ ALFSM ++K+P PDG+ S F+K+ WDI+G EF LAVK + KG Sbjct: 864 LTASVSAKEIRGALFSMPNDKSPGPDGYTSEFYKRAWDIIGAEFVLAVKSFFEKGFLPKG 923 Query: 549 TNS 557 N+ Sbjct: 924 VNT 926 Score = 31.2 bits (69), Expect(2) = 1e-11 Identities = 18/67 (26%), Positives = 29/67 (43%) Frame = +1 Query: 166 MEEYDLMQRTNTDWLSFGDKCNAFFNNSVKEKKTRNNIWSILDSQGVQQDGKSKVALAFI 345 +EE L Q + WL GDK N F+ + + +N+I I G K + Sbjct: 767 IEEKYLKQVSKLHWLKVGDKNNKTFHRAATARAAQNSIREIQKEDGSTATTKDDIKNETE 826 Query: 346 SFYKDLL 366 F+++ L Sbjct: 827 RFFQEFL 833