BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011415
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ66197.1| hypothetical protein 7G9.16 [Boechera stricta]          54   2e-15
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    54   3e-13
ref|XP_004154255.1| PREDICTED: uncharacterized protein LOC101219...    51   1e-12
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    64   3e-12
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...    64   1e-11

>gb|AFJ66197.1| hypothetical protein 7G9.16 [Boechera stricta]
          Length = 671

 Score = 54.3 bits (129), Expect(2) = 2e-15
 Identities = 25/64 (39%), Positives = 38/64 (59%)
 Frame = +3

Query: 366 RLIMDINDLEIKEALFSMDDNKTPRPDGFNSFFFKKTWDIVGEEFSLAVKHMLNHKSIQK 545
           +L+  ++  EIK  LFSM  NK+  PDGF   FF+ +W I+G EF +A +    H  + +
Sbjct: 406 QLVARVSPEEIKHTLFSMPKNKSSGPDGFTPEFFQASWAIIGPEFVIAFQSYFLHGFMPR 465

Query: 546 GTNS 557
           G N+
Sbjct: 466 GVNA 469



 Score = 53.1 bits (126), Expect(2) = 2e-15
 Identities = 24/74 (32%), Positives = 42/74 (56%)
 Frame = +1

Query: 145 ELCDLMLMEEYDLMQRTNTDWLSFGDKCNAFFNNSVKEKKTRNNIWSILDSQGVQQDGKS 324
           +L  L  MEE    Q+++ +WL  GD+  AFF  SV  ++++NNI+S+    G+     S
Sbjct: 304 DLNRLASMEEKFYQQKSHINWLQNGDRNTAFFQRSVTSRRSKNNIYSVNSRAGITLSSPS 363

Query: 325 KVALAFISFYKDLL 366
            +   F+ +++D L
Sbjct: 364 DIKQEFVDYFQDFL 377


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 54.3 bits (129), Expect(2) = 3e-13
 Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
 Frame = +1

Query: 127 ERIRRT--ELCDLMLMEEYDLMQRTNTDWLSFGDKCNAFFNNSVKEKKTRNNIWSILDSQ 300
           +R+R+   ++ +L  MEE  LMQR   DW+  GD  N+FF+  +K +  R NI+ +  + 
Sbjct: 531 DRVRKLTKDVINLNEMEEKMLMQRAKVDWIRKGDGNNSFFHAIIKSRNNRRNIYMLQKTD 590

Query: 301 GVQQDGKSKVALAFISFYKDLL 366
           G   + +S++    + FYK L+
Sbjct: 591 GTLLENQSEIEDEIMDFYKKLM 612



 Score = 45.8 bits (107), Expect(2) = 3e-13
 Identities = 22/63 (34%), Positives = 37/63 (58%)
 Frame = +3

Query: 369 LIMDINDLEIKEALFSMDDNKTPRPDGFNSFFFKKTWDIVGEEFSLAVKHMLNHKSIQKG 548
           L+ +I + +I+ AL  + D+K+P  DGF + FFK +W IV E+   A+    N   + +G
Sbjct: 641 LVSNITEQDIERALKGIGDDKSPGIDGFGAKFFKASWCIVKEDVIAAILEFFNIGRLYRG 700

Query: 549 TNS 557
            N+
Sbjct: 701 FNN 703


>ref|XP_004154255.1| PREDICTED: uncharacterized protein LOC101219773 [Cucumis sativus]
          Length = 209

 Score = 51.2 bits (121), Expect(2) = 1e-12
 Identities = 22/55 (40%), Positives = 30/55 (54%)
 Frame = +3

Query: 393 EIKEALFSMDDNKTPRPDGFNSFFFKKTWDIVGEEFSLAVKHMLNHKSIQKGTNS 557
           E++  LFSM+  K P PDG++  FFK  W +VGE F   V H        +G N+
Sbjct: 138 EVRRVLFSMEGGKAPGPDGYSGGFFKGAWTVVGEGFCDVVLHFFETNYFPQGVNT 192



 Score = 46.6 bits (109), Expect(2) = 1e-12
 Identities = 20/67 (29%), Positives = 38/67 (56%)
 Frame = +1

Query: 166 MEEYDLMQRTNTDWLSFGDKCNAFFNNSVKEKKTRNNIWSILDSQGVQQDGKSKVALAFI 345
           MEE  + Q+    WL   D+  AFF+ SV+ +++ N + S++D  G +     +V    +
Sbjct: 34  MEEAAMRQKLQIRWLKLDDQNTAFFHGSVRSRQSSNALRSVIDPDGNRLTNHDQVTQVVV 93

Query: 346 SFYKDLL 366
           +++KD+L
Sbjct: 94  NYFKDIL 100


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 63.5 bits (153), Expect(2) = 3e-12
 Identities = 29/63 (46%), Positives = 41/63 (65%)
 Frame = +3

Query: 369 LIMDINDLEIKEALFSMDDNKTPRPDGFNSFFFKKTWDIVGEEFSLAVKHMLNHKSIQKG 548
           LI  +   EI++ LF M  +K+P PDG+ S FFK TW+I+G+EF+LAV+       + KG
Sbjct: 449 LIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKG 508

Query: 549 TNS 557
            NS
Sbjct: 509 INS 511



 Score = 33.1 bits (74), Expect(2) = 3e-12
 Identities = 15/68 (22%), Positives = 32/68 (47%)
 Frame = +1

Query: 163 LMEEYDLMQRTNTDWLSFGDKCNAFFNNSVKEKKTRNNIWSILDSQGVQQDGKSKVALAF 342
           ++EE  L Q++   W   GD+    F+ +   ++  N I  IL + G+ +    ++    
Sbjct: 351 ILEEKYLKQKSKLHWCQVGDQNTKAFHRAAAAREAHNTIREILSNDGIVKTKGDEIKAEA 410

Query: 343 ISFYKDLL 366
             F+++ L
Sbjct: 411 ERFFREFL 418


>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1449

 Score = 63.5 bits (153), Expect(2) = 1e-11
 Identities = 29/63 (46%), Positives = 41/63 (65%)
 Frame = +3

Query: 369  LIMDINDLEIKEALFSMDDNKTPRPDGFNSFFFKKTWDIVGEEFSLAVKHMLNHKSIQKG 548
            L   ++  EI+ ALFSM ++K+P PDG+ S F+K+ WDI+G EF LAVK       + KG
Sbjct: 864  LTASVSAKEIRGALFSMPNDKSPGPDGYTSEFYKRAWDIIGAEFVLAVKSFFEKGFLPKG 923

Query: 549  TNS 557
             N+
Sbjct: 924  VNT 926



 Score = 31.2 bits (69), Expect(2) = 1e-11
 Identities = 18/67 (26%), Positives = 29/67 (43%)
 Frame = +1

Query: 166 MEEYDLMQRTNTDWLSFGDKCNAFFNNSVKEKKTRNNIWSILDSQGVQQDGKSKVALAFI 345
           +EE  L Q +   WL  GDK N  F+ +   +  +N+I  I    G     K  +     
Sbjct: 767 IEEKYLKQVSKLHWLKVGDKNNKTFHRAATARAAQNSIREIQKEDGSTATTKDDIKNETE 826

Query: 346 SFYKDLL 366
            F+++ L
Sbjct: 827 RFFQEFL 833