BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011412
         (1692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267516.1| PREDICTED: histone deacetylase 14 [Vitis vin...   430   e-169
ref|XP_002516301.1| Histone deacetylase, putative [Ricinus commu...   416   e-163
ref|XP_002307035.1| histone deacetylase [Populus trichocarpa] gi...   415   e-162
gb|AFK45229.1| unknown [Lotus japonicus]                              412   e-159
ref|XP_003525125.1| PREDICTED: histone deacetylase 14-like [Glyc...   407   e-158

>ref|XP_002267516.1| PREDICTED: histone deacetylase 14 [Vitis vinifera]
            gi|296088531|emb|CBI37522.3| unnamed protein product
            [Vitis vinifera]
          Length = 437

 Score =  430 bits (1105), Expect(2) = e-169
 Identities = 208/244 (85%), Positives = 220/244 (90%)
 Frame = +1

Query: 745  VAASRIRQSPPLGFALIRPPGHHAIPKGPMGFCVFGNXXXXXXXXXXXXGLKRVFIIDFD 924
            VAAS+  Q PP+GFALIRPPGHHAIPKGPMGFCVFGN            GLKRVFIIDFD
Sbjct: 194  VAASKSSQDPPMGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFD 253

Query: 925  VHHGNGTCDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGHGRGEGATLNLPLPGGSGDSAM 1104
            VHHGNGT DAFYDDPDIFFLSTHQDGSYPGTGKIDEVGHG GEGATLNLPLPGGSGD AM
Sbjct: 254  VHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGHGSGEGATLNLPLPGGSGDIAM 313

Query: 1105 RSVFEEVIVPCAQRFKPDIILVSAGYDGHVLDPLASLQFTTNTYYMLASNIKQLARELCG 1284
            R+VF+EVIVP AQRFKPDIILVSAGYDGHVLDPLASLQFTT TYYMLASNIKQLA++LCG
Sbjct: 314  RTVFDEVIVPSAQRFKPDIILVSAGYDGHVLDPLASLQFTTGTYYMLASNIKQLAKDLCG 373

Query: 1285 GRCVFFLEGGYNLQSLSYSVADSFRAFLGERSSSSQFDDPAILYEEPSAKVKQAIQRIKY 1464
            GRCVFFLEGGYNL SLSYSVADSFRAFLGE S +S+FDDPAILYEEPS KVKQAIQ++K+
Sbjct: 374  GRCVFFLEGGYNLSSLSYSVADSFRAFLGEPSLASEFDDPAILYEEPSTKVKQAIQKVKH 433

Query: 1465 IHSL 1476
            +HSL
Sbjct: 434  LHSL 437



 Score =  193 bits (491), Expect(2) = e-169
 Identities = 105/177 (59%), Positives = 130/177 (73%), Gaps = 1/177 (0%)
 Frame = +2

Query: 173 FQKHIRSEMKY-SEGIGPHIPSSSGVGKDPFLDSYETRLADARVLYCVAPALGHNQESHP 349
           F+KH++S  +Y S+  GP +  S        L    + L+DARV+YCVAPA+GHNQESHP
Sbjct: 44  FRKHLKSGRRYFSKSRGPFVSCS--------LVPSTSELSDARVIYCVAPAMGHNQESHP 95

Query: 350 ESNFRVPAIMSALEKMELTTKFRSSEVVELQNFKPASVDDITSVHSKAYVSGLEKXXXXX 529
           ESNFRVPAI+SALEKMEL+  FR SE++EL +F PASV+DI SVH+KAYVSGLEK     
Sbjct: 96  ESNFRVPAIVSALEKMELSPMFRGSEILELHSFSPASVEDIASVHTKAYVSGLEK----- 150

Query: 530 XXXXXXXXXXXXXAMDKASVEGLIFIEGSGPTYATETTFQESLIAAGAGISLVDSVV 700
                        +MD+AS +G+I+I+GSGPTYAT TTFQESL+AAGAGI+LVDSVV
Sbjct: 151 -------------SMDQASQKGIIYIDGSGPTYATATTFQESLLAAGAGITLVDSVV 194


>ref|XP_002516301.1| Histone deacetylase, putative [Ricinus communis]
            gi|223544531|gb|EEF46048.1| Histone deacetylase, putative
            [Ricinus communis]
          Length = 425

 Score =  416 bits (1070), Expect(2) = e-163
 Identities = 200/244 (81%), Positives = 216/244 (88%)
 Frame = +1

Query: 745  VAASRIRQSPPLGFALIRPPGHHAIPKGPMGFCVFGNXXXXXXXXXXXXGLKRVFIIDFD 924
            VAAS   Q+PP GFALIRPPGHHAIPKGPMGFCVFGN            GLKRVFIIDFD
Sbjct: 182  VAASNNSQNPPTGFALIRPPGHHAIPKGPMGFCVFGNVAIAARHAQRVHGLKRVFIIDFD 241

Query: 925  VHHGNGTCDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGHGRGEGATLNLPLPGGSGDSAM 1104
            VHHGNGT DAFYDDPDIFFLSTHQDGSYPGTGKIDEVG G GEG TLNLPLPGGSGD AM
Sbjct: 242  VHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGQGDGEGTTLNLPLPGGSGDVAM 301

Query: 1105 RSVFEEVIVPCAQRFKPDIILVSAGYDGHVLDPLASLQFTTNTYYMLASNIKQLARELCG 1284
            R+VF+EVIVPCAQRFKPDIILVSAGYDGHVLDPLASLQFTT T+YMLASNI QLA+++CG
Sbjct: 302  RTVFDEVIVPCAQRFKPDIILVSAGYDGHVLDPLASLQFTTGTFYMLASNITQLAKDMCG 361

Query: 1285 GRCVFFLEGGYNLQSLSYSVADSFRAFLGERSSSSQFDDPAILYEEPSAKVKQAIQRIKY 1464
            GRC+FFLEGGYNL SLSYSVADSFRAFLGE S +S+FD+PAILYEEP  +VKQAIQ++++
Sbjct: 362  GRCIFFLEGGYNLDSLSYSVADSFRAFLGETSLASEFDNPAILYEEPLTRVKQAIQKVRH 421

Query: 1465 IHSL 1476
            IHSL
Sbjct: 422  IHSL 425



 Score =  188 bits (477), Expect(2) = e-163
 Identities = 103/179 (57%), Positives = 129/179 (72%), Gaps = 1/179 (0%)
 Frame = +2

Query: 167 RSFQKHIRSEMKY-SEGIGPHIPSSSGVGKDPFLDSYETRLADARVLYCVAPALGHNQES 343
           R F +H+ S   + +  I   I  S+   KDP L S + +L DAR++Y VAPA+GHNQES
Sbjct: 23  RHFSQHVMSSRDHCNRSIRACICCSNSFEKDPNLPSIQ-QLTDARIIYSVAPAMGHNQES 81

Query: 344 HPESNFRVPAIMSALEKMELTTKFRSSEVVELQNFKPASVDDITSVHSKAYVSGLEKXXX 523
           HPES+ RVPAI++ALEKMEL+ KFR  E++ELQ+FKPAS  DI SVH+KAYV+GLEK   
Sbjct: 82  HPESHLRVPAIVTALEKMELSAKFRGPEIIELQHFKPASAIDIASVHAKAYVAGLEK--- 138

Query: 524 XXXXXXXXXXXXXXXAMDKASVEGLIFIEGSGPTYATETTFQESLIAAGAGISLVDSVV 700
                          AMD+AS EG+IFI+G+GPTYAT TTFQESL+AAGAG++LVDSVV
Sbjct: 139 ---------------AMDQASQEGIIFIDGTGPTYATATTFQESLMAAGAGLALVDSVV 182


>ref|XP_002307035.1| histone deacetylase [Populus trichocarpa] gi|222856484|gb|EEE94031.1|
            histone deacetylase [Populus trichocarpa]
          Length = 390

 Score =  415 bits (1067), Expect(2) = e-162
 Identities = 199/244 (81%), Positives = 215/244 (88%)
 Frame = +1

Query: 745  VAASRIRQSPPLGFALIRPPGHHAIPKGPMGFCVFGNXXXXXXXXXXXXGLKRVFIIDFD 924
            VAAS   Q+PP GFALIRPPGHHAIPKGPMGFCVFGN            GLKRVFIIDFD
Sbjct: 147  VAASNCSQNPPTGFALIRPPGHHAIPKGPMGFCVFGNVAIAARHAQLVHGLKRVFIIDFD 206

Query: 925  VHHGNGTCDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGHGRGEGATLNLPLPGGSGDSAM 1104
            VHHGNGT DAF+DDPDI+FLSTHQDGSYPGTGKIDE+GHG GEG TLNLPLPGGSGD +M
Sbjct: 207  VHHGNGTNDAFFDDPDIYFLSTHQDGSYPGTGKIDEIGHGDGEGTTLNLPLPGGSGDISM 266

Query: 1105 RSVFEEVIVPCAQRFKPDIILVSAGYDGHVLDPLASLQFTTNTYYMLASNIKQLARELCG 1284
            R+VF+EVIVP AQRFKPDIILVSAGYD HVLDPL SLQFTT TYY LASNIK+LA++LCG
Sbjct: 267  RTVFDEVIVPSAQRFKPDIILVSAGYDAHVLDPLGSLQFTTGTYYTLASNIKELAKDLCG 326

Query: 1285 GRCVFFLEGGYNLQSLSYSVADSFRAFLGERSSSSQFDDPAILYEEPSAKVKQAIQRIKY 1464
            GRCVFFLEGGYNL SLSYSV DSFRAFLGE+S +S+FD+PAILYEEPS KVKQAIQR+K+
Sbjct: 327  GRCVFFLEGGYNLDSLSYSVTDSFRAFLGEKSLASEFDNPAILYEEPSTKVKQAIQRVKH 386

Query: 1465 IHSL 1476
            IHSL
Sbjct: 387  IHSL 390



 Score =  184 bits (466), Expect(2) = e-162
 Identities = 96/161 (59%), Positives = 122/161 (75%)
 Frame = +2

Query: 218 GPHIPSSSGVGKDPFLDSYETRLADARVLYCVAPALGHNQESHPESNFRVPAIMSALEKM 397
           G  I  S  + KDP ++    +L DARV+Y VAPA+GHNQE+HPES  RVPAI+SALEK 
Sbjct: 9   GFSISCSYSLDKDPLIE----KLTDARVIYSVAPAMGHNQEAHPESYLRVPAIVSALEKA 64

Query: 398 ELTTKFRSSEVVELQNFKPASVDDITSVHSKAYVSGLEKXXXXXXXXXXXXXXXXXXAMD 577
           ELT+KFR SE++ELQ+FKPAS+DDI +VH++AYV+GLEK                  AMD
Sbjct: 65  ELTSKFRGSEIIELQDFKPASLDDIANVHARAYVAGLEK------------------AMD 106

Query: 578 KASVEGLIFIEGSGPTYATETTFQESLIAAGAGISLVDSVV 700
           +AS +G+I+I+GSGPTYAT TTF+ESL+AAGAG++LVDSVV
Sbjct: 107 QASEQGIIYIDGSGPTYATATTFRESLVAAGAGLTLVDSVV 147


>gb|AFK45229.1| unknown [Lotus japonicus]
          Length = 413

 Score =  412 bits (1058), Expect(2) = e-159
 Identities = 195/244 (79%), Positives = 219/244 (89%)
 Frame = +1

Query: 745  VAASRIRQSPPLGFALIRPPGHHAIPKGPMGFCVFGNXXXXXXXXXXXXGLKRVFIIDFD 924
            VAAS+I++ PP GFALIRPPGHHA+P+GPMGFCVFGN             LKRVFIIDFD
Sbjct: 170  VAASKIKRDPPTGFALIRPPGHHAVPQGPMGFCVFGNVAIAARYAQRVHALKRVFIIDFD 229

Query: 925  VHHGNGTCDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGHGRGEGATLNLPLPGGSGDSAM 1104
            VHHGNGT DAFYDDPDIFFLS HQDGSYPGTGK DEVG G GEG TLNLPLPGGSGD+A+
Sbjct: 230  VHHGNGTNDAFYDDPDIFFLSFHQDGSYPGTGKFDEVGTGDGEGTTLNLPLPGGSGDTAI 289

Query: 1105 RSVFEEVIVPCAQRFKPDIILVSAGYDGHVLDPLASLQFTTNTYYMLASNIKQLARELCG 1284
            R+VF+EV+VPCAQRFKPDIILVSAGYDGHVLDPLA+LQFTT TYYMLAS+IKQLA++LCG
Sbjct: 290  RTVFDEVVVPCAQRFKPDIILVSAGYDGHVLDPLANLQFTTGTYYMLASSIKQLAKDLCG 349

Query: 1285 GRCVFFLEGGYNLQSLSYSVADSFRAFLGERSSSSQFDDPAILYEEPSAKVKQAIQRIKY 1464
            GRCVFFLEGGYNL+SLSYSVADSFRA +G++S +S+FD+P ILYEEP+AK+KQAIQRIK+
Sbjct: 350  GRCVFFLEGGYNLKSLSYSVADSFRALIGDQSLASEFDNPNILYEEPTAKIKQAIQRIKH 409

Query: 1465 IHSL 1476
            IHSL
Sbjct: 410  IHSL 413



 Score =  178 bits (451), Expect(2) = e-159
 Identities = 90/140 (64%), Positives = 112/140 (80%)
 Frame = +2

Query: 281 RLADARVLYCVAPALGHNQESHPESNFRVPAIMSALEKMELTTKFRSSEVVELQNFKPAS 460
           +L+DARV+Y VAP++GHNQESHPES+FRVP+I++ALE+M+LT KFR SE++ELQ+F+PAS
Sbjct: 49  QLSDARVIYSVAPSMGHNQESHPESHFRVPSIVNALEEMKLTPKFRGSEIIELQHFEPAS 108

Query: 461 VDDITSVHSKAYVSGLEKXXXXXXXXXXXXXXXXXXAMDKASVEGLIFIEGSGPTYATET 640
           VDDI SVH++AYV GLEK                   MD+A  EGLI IEGSGPTYAT T
Sbjct: 109 VDDIASVHARAYVFGLEK------------------VMDQAMEEGLILIEGSGPTYATST 150

Query: 641 TFQESLIAAGAGISLVDSVV 700
           TFQES++AAGAG++LVDSVV
Sbjct: 151 TFQESIVAAGAGLALVDSVV 170


>ref|XP_003525125.1| PREDICTED: histone deacetylase 14-like [Glycine max]
          Length = 417

 Score =  407 bits (1046), Expect(2) = e-158
 Identities = 193/244 (79%), Positives = 216/244 (88%)
 Frame = +1

Query: 745  VAASRIRQSPPLGFALIRPPGHHAIPKGPMGFCVFGNXXXXXXXXXXXXGLKRVFIIDFD 924
            VA S+I+   P GFALIRPPGHHA+P+GPMGFC+FGN            GLKRVFIIDFD
Sbjct: 174  VACSKIKGDAPTGFALIRPPGHHAVPQGPMGFCIFGNVAIAARYSQRVHGLKRVFIIDFD 233

Query: 925  VHHGNGTCDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGHGRGEGATLNLPLPGGSGDSAM 1104
            VHHGNGT DAFYDDPD+FFLS HQDGSYPGTGK DEVG G GEG TLNLPLPGGSGD+A+
Sbjct: 234  VHHGNGTNDAFYDDPDVFFLSFHQDGSYPGTGKFDEVGSGDGEGTTLNLPLPGGSGDTAI 293

Query: 1105 RSVFEEVIVPCAQRFKPDIILVSAGYDGHVLDPLASLQFTTNTYYMLASNIKQLARELCG 1284
            R+VF+EVIVPCAQRFKPDIILVSAGYDGHVLDPLA+LQ+TT TYYMLAS+IKQLA++LCG
Sbjct: 294  RTVFDEVIVPCAQRFKPDIILVSAGYDGHVLDPLANLQYTTGTYYMLASSIKQLAKDLCG 353

Query: 1285 GRCVFFLEGGYNLQSLSYSVADSFRAFLGERSSSSQFDDPAILYEEPSAKVKQAIQRIKY 1464
            GRCVFFLEGGYNL+SLSYSVAD+FRA LG+RS +S+FD+P ILYEEPS KVKQAIQ+IK+
Sbjct: 354  GRCVFFLEGGYNLKSLSYSVADTFRALLGDRSLASEFDNPNILYEEPSTKVKQAIQKIKH 413

Query: 1465 IHSL 1476
            IHSL
Sbjct: 414  IHSL 417



 Score =  178 bits (451), Expect(2) = e-158
 Identities = 89/140 (63%), Positives = 114/140 (81%)
 Frame = +2

Query: 281 RLADARVLYCVAPALGHNQESHPESNFRVPAIMSALEKMELTTKFRSSEVVELQNFKPAS 460
           +L+DAR++Y VAP++GHNQESHPES+FRVPAI++ALE+M+LT+KFR  EV+ELQ+F+PAS
Sbjct: 53  QLSDARLIYSVAPSMGHNQESHPESHFRVPAIVNALEEMQLTSKFRGPEVIELQHFEPAS 112

Query: 461 VDDITSVHSKAYVSGLEKXXXXXXXXXXXXXXXXXXAMDKASVEGLIFIEGSGPTYATET 640
           VDDI SVH++AYVSGLEK                   MD+A  +GLIF++GSGPTYAT T
Sbjct: 113 VDDIASVHARAYVSGLEK------------------VMDQAVEKGLIFLDGSGPTYATAT 154

Query: 641 TFQESLIAAGAGISLVDSVV 700
           TFQES++AAGAG++LVDSVV
Sbjct: 155 TFQESIVAAGAGLALVDSVV 174