BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011411
         (1876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36671.3| unnamed protein product [Vitis vinifera]               80   1e-12
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...    79   3e-12
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]    79   3e-12
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc...    78   9e-12
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei...    78   9e-12

>emb|CBI36671.3| unnamed protein product [Vitis vinifera]
          Length = 1405

 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 62/186 (33%), Positives = 95/186 (51%), Gaps = 1/186 (0%)
 Frame = +1

Query: 295 ERGFYQPSTEATWEAYQALTSLIEAHLYRPNIPKEVMCGVADEILSVLKSTIINSPSSKK 474
           E G YQP T+ T  AY+A+ S+I+  L     P  ++ G ADEIL+VLK+  + +P  KK
Sbjct: 109 EEGVYQPKTKETRAAYEAMLSVIQQQL--GGQPLNIVSGAADEILAVLKNETVKNPDKKK 166

Query: 475 TEIERILSPIPDFAFNELLSVANLITDYYVARPLGKTDARTALFTPEDNFYQPKSEDSCV 654
            EIER+L+PIP+  F++L+S+  LITD+      G T     L   + + Y         
Sbjct: 167 -EIERLLNPIPNHIFDQLVSIGRLITDFQDEANEGMT-----LNVQDIDAY--------- 211

Query: 655 PYKIFLDIVIDNIGSQQPQVVQC-VVAHEVLTILKNEDLGDTQKKVMLKSFLEDVSDDTY 831
               +L   I     QQ    QC  +A EVL IL   D  + + K+++      +  D +
Sbjct: 212 ----WLQRKISQAYEQQIDPQQCQKLAEEVLKILAEGDDREVETKLLV-----HLQFDKF 262

Query: 832 SMMLFI 849
           S++ F+
Sbjct: 263 SLIKFL 268


>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
           [Vitis vinifera]
          Length = 2177

 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 41/88 (46%), Positives = 60/88 (68%)
 Frame = +1

Query: 295 ERGFYQPSTEATWEAYQALTSLIEAHLYRPNIPKEVMCGVADEILSVLKSTIINSPSSKK 474
           E G YQP T+ T  AY+A+ S+I+  L     P  ++ G ADEIL+VLK+  + +P  KK
Sbjct: 109 EEGVYQPKTKETRAAYEAMLSVIQQQL--GGQPLNIVSGAADEILAVLKNETVKNPDKKK 166

Query: 475 TEIERILSPIPDFAFNELLSVANLITDY 558
            EIER+L+PIP+  F++L+S+  LITD+
Sbjct: 167 -EIERLLNPIPNHIFDQLVSIGRLITDF 193


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 41/88 (46%), Positives = 60/88 (68%)
 Frame = +1

Query: 295 ERGFYQPSTEATWEAYQALTSLIEAHLYRPNIPKEVMCGVADEILSVLKSTIINSPSSKK 474
           E G YQP T+ T  AY+A+ S+I+  L     P  ++ G ADEIL+VLK+  + +P  KK
Sbjct: 109 EEGVYQPKTKETRAAYEAMLSVIQQQL--GGQPLNIVSGAADEILAVLKNETVKNPDKKK 166

Query: 475 TEIERILSPIPDFAFNELLSVANLITDY 558
            EIER+L+PIP+  F++L+S+  LITD+
Sbjct: 167 -EIERLLNPIPNHIFDQLVSIGRLITDF 193


>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
           200 kDa helicase-like [Cucumis sativus]
          Length = 2175

 Score = 77.8 bits (190), Expect = 9e-12
 Identities = 44/112 (39%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
 Frame = +1

Query: 226 VANTSTSACGGAKQVSEDTPFVP-ERGFYQPSTEATWEAYQALTSLIEAHLYRPNIPKEV 402
           +A    S  G  +++ E++     E G Y P T+ T  AY+A+ S+I+  L     P  +
Sbjct: 84  IAEPQPSRQGKRRRLQEESVLTSTEEGVYMPKTKETRAAYEAMLSVIQQQL--GGQPLSI 141

Query: 403 MCGVADEILSVLKSTIINSPSSKKTEIERILSPIPDFAFNELLSVANLITDY 558
           + G ADEIL+VLK+    +P  KK EIE++L+PIP+  F++L+S+  LITDY
Sbjct: 142 VSGAADEILAVLKNDSFKNPDKKK-EIEKLLNPIPNNVFDQLVSIGRLITDY 192


>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
           [Cucumis sativus]
          Length = 2175

 Score = 77.8 bits (190), Expect = 9e-12
 Identities = 44/112 (39%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
 Frame = +1

Query: 226 VANTSTSACGGAKQVSEDTPFVP-ERGFYQPSTEATWEAYQALTSLIEAHLYRPNIPKEV 402
           +A    S  G  +++ E++     E G Y P T+ T  AY+A+ S+I+  L     P  +
Sbjct: 84  IAEPQPSRQGKRRRLQEESVLTSTEEGVYMPKTKETRAAYEAMLSVIQQQL--GGQPLSI 141

Query: 403 MCGVADEILSVLKSTIINSPSSKKTEIERILSPIPDFAFNELLSVANLITDY 558
           + G ADEIL+VLK+    +P  KK EIE++L+PIP+  F++L+S+  LITDY
Sbjct: 142 VSGAADEILAVLKNDSFKNPDKKK-EIEKLLNPIPNNVFDQLVSIGRLITDY 192