BLASTX nr result

ID: Coptis25_contig00011409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011409
         (1019 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003580787.1| PREDICTED: OTU domain-containing protein 3-l...    54   2e-08
dbj|BAJ53192.1| JHL03K20.1 [Jatropha curcas]                           58   3e-08
ref|XP_001766385.1| predicted protein [Physcomitrella patens sub...    53   7e-08
ref|XP_002523634.1| OTU domain-containing protein, putative [Ric...    56   2e-07
ref|XP_002448738.1| hypothetical protein SORBIDRAFT_06g032350 [S...    50   3e-07

>ref|XP_003580787.1| PREDICTED: OTU domain-containing protein 3-like [Brachypodium
           distachyon]
          Length = 391

 Score = 54.3 bits (129), Expect(2) = 2e-08
 Identities = 24/39 (61%), Positives = 29/39 (74%)
 Frame = +3

Query: 462 VSLDESCKSMAEESTWAGNMEL*AAPLVTRSNICVHQVS 578
           V  DE C SM ++ TWAGNMEL AA LVTR NIC+H ++
Sbjct: 96  VPFDEYCDSMMKDGTWAGNMELQAASLVTRRNICIHMLN 134



 Score = 30.8 bits (68), Expect(2) = 2e-08
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +2

Query: 410 LEY*QKHREDFEPFIED 460
           ++Y  KHRE+FEPFIED
Sbjct: 78  VQYIVKHREEFEPFIED 94


>dbj|BAJ53192.1| JHL03K20.1 [Jatropha curcas]
          Length = 397

 Score = 57.8 bits (138), Expect(2) = 3e-08
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = +3

Query: 462 VSLDESCKSMAEESTWAGNMEL*AAPLVTRSNICVHQ 572
           V  DE CKSM ++ TWAG+MEL AA LVTRSNIC+HQ
Sbjct: 92  VPFDEYCKSMEKDGTWAGHMELQAASLVTRSNICIHQ 128



 Score = 26.9 bits (58), Expect(2) = 3e-08
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +2

Query: 410 LEY*QKHREDFEPFIED 460
           ++Y  K+RE FEPFIED
Sbjct: 74  VQYIMKNREMFEPFIED 90


>ref|XP_001766385.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162682294|gb|EDQ68713.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 441

 Score = 52.8 bits (125), Expect(2) = 7e-08
 Identities = 23/38 (60%), Positives = 30/38 (78%)
 Frame = +3

Query: 462 VSLDESCKSMAEESTWAGNMEL*AAPLVTRSNICVHQV 575
           V  DE  K+M EE+TWAG+ME+ A  LVTR+NIC+HQ+
Sbjct: 157 VPFDEYLKTMREETTWAGHMEIQATSLVTRTNICIHQL 194



 Score = 30.8 bits (68), Expect(2) = 7e-08
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 410 LEY*QKHREDFEPFIED 460
           + Y Q+HRE+FEPF+ED
Sbjct: 139 VNYLQEHREEFEPFVED 155


>ref|XP_002523634.1| OTU domain-containing protein, putative [Ricinus communis]
           gi|223537196|gb|EEF38829.1| OTU domain-containing
           protein, putative [Ricinus communis]
          Length = 371

 Score = 55.8 bits (133), Expect(2) = 2e-07
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = +3

Query: 462 VSLDESCKSMAEESTWAGNMEL*AAPLVTRSNICVHQ 572
           +  DE C+SM ++ TWAG+MEL AA LVTRSNIC+HQ
Sbjct: 92  IPFDEYCQSMEKDGTWAGHMELQAASLVTRSNICIHQ 128



 Score = 26.6 bits (57), Expect(2) = 2e-07
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +2

Query: 410 LEY*QKHREDFEPFIED 460
           ++Y  K+R+ FEPFIED
Sbjct: 74  VQYLMKNRDTFEPFIED 90


>ref|XP_002448738.1| hypothetical protein SORBIDRAFT_06g032350 [Sorghum bicolor]
           gi|241939921|gb|EES13066.1| hypothetical protein
           SORBIDRAFT_06g032350 [Sorghum bicolor]
          Length = 384

 Score = 49.7 bits (117), Expect(2) = 3e-07
 Identities = 21/39 (53%), Positives = 29/39 (74%)
 Frame = +3

Query: 462 VSLDESCKSMAEESTWAGNMEL*AAPLVTRSNICVHQVS 578
           V  +E C SM ++ TWAG+MEL AA L+TR NIC+H ++
Sbjct: 97  VPFEEYCDSMLKDGTWAGHMELQAASLLTRRNICIHMLN 135



 Score = 32.0 bits (71), Expect(2) = 3e-07
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +2

Query: 410 LEY*QKHREDFEPFIED 460
           +EY  KHRE+FEPFIED
Sbjct: 79  VEYIVKHREEFEPFIED 95


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