BLASTX nr result
ID: Coptis25_contig00011405
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011405
(594 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264808.1| PREDICTED: uncharacterized protein LOC100267... 102 2e-27
emb|CBI18099.3| unnamed protein product [Vitis vinifera] 102 2e-27
gb|AFW77169.1| hypothetical protein ZEAMMB73_104442 [Zea mays] 101 9e-26
ref|XP_003565377.1| PREDICTED: uncharacterized protein LOC100833... 108 9e-26
ref|NP_001159315.1| uncharacterized protein LOC100304407 [Zea ma... 101 9e-26
>ref|XP_002264808.1| PREDICTED: uncharacterized protein LOC100267149 [Vitis vinifera]
Length = 664
Score = 102 bits (253), Expect(2) = 2e-27
Identities = 48/79 (60%), Positives = 58/79 (73%)
Frame = +1
Query: 304 RSQAAVAALDGHIYIFGGGNRDLWYDTVECYSPFRNEWTSCPSLSVEKGNLAGATLHGKL 483
RS A+VA L+G +YIFGGGN WYDTVE Y+ NEWT L+ EKG+LAGATL+GK+
Sbjct: 420 RSYASVAVLNGELYIFGGGNGSEWYDTVEAYNLVSNEWTLRAPLNKEKGSLAGATLNGKI 479
Query: 484 FAIGGANRDHCLSDVETFD 540
FA+GG N C SDV+ FD
Sbjct: 480 FALGGGNGIECFSDVDMFD 498
Score = 45.8 bits (107), Expect(2) = 2e-27
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +2
Query: 191 EELIFLLGGYDGNSFLSAVDCY*PSKDIVRSLQPMS 298
++LIFL+GG DG S+LS +D Y PS+D+ +SL PM+
Sbjct: 382 DDLIFLVGGCDGESWLSTLDSYSPSQDMKKSLSPMT 417
>emb|CBI18099.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 102 bits (253), Expect(2) = 2e-27
Identities = 48/79 (60%), Positives = 58/79 (73%)
Frame = +1
Query: 304 RSQAAVAALDGHIYIFGGGNRDLWYDTVECYSPFRNEWTSCPSLSVEKGNLAGATLHGKL 483
RS A+VA L+G +YIFGGGN WYDTVE Y+ NEWT L+ EKG+LAGATL+GK+
Sbjct: 401 RSYASVAVLNGELYIFGGGNGSEWYDTVEAYNLVSNEWTLRAPLNKEKGSLAGATLNGKI 460
Query: 484 FAIGGANRDHCLSDVETFD 540
FA+GG N C SDV+ FD
Sbjct: 461 FALGGGNGIECFSDVDMFD 479
Score = 45.8 bits (107), Expect(2) = 2e-27
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +2
Query: 191 EELIFLLGGYDGNSFLSAVDCY*PSKDIVRSLQPMS 298
++LIFL+GG DG S+LS +D Y PS+D+ +SL PM+
Sbjct: 363 DDLIFLVGGCDGESWLSTLDSYSPSQDMKKSLSPMT 398
>gb|AFW77169.1| hypothetical protein ZEAMMB73_104442 [Zea mays]
Length = 733
Score = 101 bits (252), Expect(2) = 9e-26
Identities = 46/82 (56%), Positives = 60/82 (73%)
Frame = +1
Query: 304 RSQAAVAALDGHIYIFGGGNRDLWYDTVECYSPFRNEWTSCPSLSVEKGNLAGATLHGKL 483
RS A+ A LDGHI+ FGGG+ WY+TVECYS NEWT CPS++ +KG+LAG L+ K+
Sbjct: 489 RSYASAAVLDGHIFAFGGGDGMSWYNTVECYSSRNNEWTECPSMNQKKGSLAGICLNEKI 548
Query: 484 FAIGGANRDHCLSDVETFDPSL 549
+AIGG + + S+VE FDP L
Sbjct: 549 YAIGGGDGNEFYSEVEIFDPYL 570
Score = 40.8 bits (94), Expect(2) = 9e-26
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +2
Query: 200 IFLLGGYDGNSFLSAVDCY*PSKDIVRSLQPMSA 301
IFL+GGY+G ++LS++D + P KD V L PMS+
Sbjct: 454 IFLIGGYNGVTWLSSLDSFSPEKDAVLGLTPMSS 487
Score = 56.2 bits (134), Expect(2) = 1e-08
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +1
Query: 304 RSQAAVAALDGHIYIFGGGNRDLWYDTVECYSPFRNEWTSCPSLSVEKGNLAGATLHGKL 483
R A + L+G IY GG + +++ + E Y P W PS+S +G+ L L
Sbjct: 583 RFALAASGLNGVIYTSGGYDGNMYLKSAERYDPREGFWVRLPSMSTRRGSHTLTVLGDTL 642
Query: 484 FAIGGANRDHCLSDVETFDPSL 549
+A+GG + D +S VE +DPSL
Sbjct: 643 YAMGGYDGDKMVSSVEIYDPSL 664
Score = 28.5 bits (62), Expect(2) = 1e-08
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 185 CGEELIFLLGGYDGNSFLSAVDCY*P 262
C E I+ +GG DGN F S V+ + P
Sbjct: 543 CLNEKIYAIGGGDGNEFYSEVEIFDP 568
>ref|XP_003565377.1| PREDICTED: uncharacterized protein LOC100833476 [Brachypodium
distachyon]
Length = 688
Score = 108 bits (269), Expect(2) = 9e-26
Identities = 49/82 (59%), Positives = 62/82 (75%)
Frame = +1
Query: 304 RSQAAVAALDGHIYIFGGGNRDLWYDTVECYSPFRNEWTSCPSLSVEKGNLAGATLHGKL 483
RS VAAL+ HIY+FGGG+ WY+TVECY+ NEW +CP L +KG+LAGATL+GK+
Sbjct: 442 RSYTGVAALNDHIYVFGGGDGSSWYNTVECYNRVSNEWMACPRLKQKKGSLAGATLNGKI 501
Query: 484 FAIGGANRDHCLSDVETFDPSL 549
FAIGG + LS+VE FDP+L
Sbjct: 502 FAIGGGDGYQSLSEVEMFDPAL 523
Score = 34.3 bits (77), Expect(2) = 9e-26
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = +2
Query: 200 IFLLGGYDGNSFLSAVDCY*PSKDIVRSLQPMSA 301
IFL+GG++G S+L ++D + P+ D + L+PMS+
Sbjct: 407 IFLIGGHNGISWLPSLDSFYPTIDRLMPLRPMSS 440
>ref|NP_001159315.1| uncharacterized protein LOC100304407 [Zea mays]
gi|223943353|gb|ACN25760.1| unknown [Zea mays]
gi|413944519|gb|AFW77168.1| hypothetical protein
ZEAMMB73_104442 [Zea mays]
Length = 676
Score = 101 bits (252), Expect(2) = 9e-26
Identities = 46/82 (56%), Positives = 60/82 (73%)
Frame = +1
Query: 304 RSQAAVAALDGHIYIFGGGNRDLWYDTVECYSPFRNEWTSCPSLSVEKGNLAGATLHGKL 483
RS A+ A LDGHI+ FGGG+ WY+TVECYS NEWT CPS++ +KG+LAG L+ K+
Sbjct: 432 RSYASAAVLDGHIFAFGGGDGMSWYNTVECYSSRNNEWTECPSMNQKKGSLAGICLNEKI 491
Query: 484 FAIGGANRDHCLSDVETFDPSL 549
+AIGG + + S+VE FDP L
Sbjct: 492 YAIGGGDGNEFYSEVEIFDPYL 513
Score = 40.8 bits (94), Expect(2) = 9e-26
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +2
Query: 200 IFLLGGYDGNSFLSAVDCY*PSKDIVRSLQPMSA 301
IFL+GGY+G ++LS++D + P KD V L PMS+
Sbjct: 397 IFLIGGYNGVTWLSSLDSFSPEKDAVLGLTPMSS 430
Score = 56.2 bits (134), Expect(2) = 1e-08
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +1
Query: 304 RSQAAVAALDGHIYIFGGGNRDLWYDTVECYSPFRNEWTSCPSLSVEKGNLAGATLHGKL 483
R A + L+G IY GG + +++ + E Y P W PS+S +G+ L L
Sbjct: 526 RFALAASGLNGVIYTSGGYDGNMYLKSAERYDPREGFWVRLPSMSTRRGSHTLTVLGDTL 585
Query: 484 FAIGGANRDHCLSDVETFDPSL 549
+A+GG + D +S VE +DPSL
Sbjct: 586 YAMGGYDGDKMVSSVEIYDPSL 607
Score = 28.5 bits (62), Expect(2) = 1e-08
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 185 CGEELIFLLGGYDGNSFLSAVDCY*P 262
C E I+ +GG DGN F S V+ + P
Sbjct: 486 CLNEKIYAIGGGDGNEFYSEVEIFDP 511