BLASTX nr result

ID: Coptis25_contig00011403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011403
         (1250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272348.1| PREDICTED: alcohol dehydrogenase-like 3 [Vit...   566   e-159
ref|XP_003516359.1| PREDICTED: uncharacterized protein LOC100787...   527   e-147
ref|XP_002518925.1| Alcohol dehydrogenase, putative [Ricinus com...   520   e-145
ref|XP_002333655.1| predicted protein [Populus trichocarpa] gi|2...   517   e-144
dbj|BAJ92604.1| predicted protein [Hordeum vulgare subsp. vulgare]    509   e-142

>ref|XP_002272348.1| PREDICTED: alcohol dehydrogenase-like 3 [Vitis vinifera]
            gi|297742453|emb|CBI34602.3| unnamed protein product
            [Vitis vinifera]
          Length = 394

 Score =  567 bits (1460), Expect = e-159
 Identities = 270/363 (74%), Positives = 308/363 (84%)
 Frame = +2

Query: 158  NGLSVPGETRGKVINCKAAVVYGPEEPLVIEEVQVAPPQKMEVRIKILYTSICHTDLSAW 337
            +G+    ET GKVI CKAAVV GP +P VIEE+QV PPQKMEVR+KILYTSICHTDLS W
Sbjct: 10   SGVHTESETTGKVITCKAAVVLGPGQPFVIEEIQVDPPQKMEVRVKILYTSICHTDLSYW 69

Query: 338  IGENENQRVYPRILGHEAAGIVESVGEGVVDMKEGDHVIPIFNGECGDCVYCKSEKTNLC 517
             GE+E  RVYPRILGHEAAGIVESVGEGVVDM++GDHVIPIFNGECGDCVYCK +KTNLC
Sbjct: 70   KGESEAYRVYPRILGHEAAGIVESVGEGVVDMRKGDHVIPIFNGECGDCVYCKCDKTNLC 129

Query: 518  GKYRVNPMKSVMDIDGKPRFSTPDGKPIYHFLSTSTFSEYTVLDSACVVKIDSKAPLKKM 697
             ++RV+P++SVM  DG  RFST DGKPI+HFL+TSTF+EYTVL SACVVKIDSKAPLKKM
Sbjct: 130  ERFRVHPLRSVMVNDGNCRFSTKDGKPIFHFLNTSTFTEYTVLHSACVVKIDSKAPLKKM 189

Query: 698  SLLSCGVSTGVGAVWNTANVHSGASVXXXXXXXXXXXXXXXXXXXXXTRIIGVDINKDKF 877
             LLSCGVS+G+GA WNTA V +G+SV                     ++IIGVDIN +KF
Sbjct: 190  ILLSCGVSSGLGAAWNTAKVQAGSSVAIFGLGSVGLAAAEGARTRGASKIIGVDINPNKF 249

Query: 878  IKGKAMGMTEFINPKDLNRPVHEEIKDLTDGGVHYTFECSGNLDVLREAFLSTHDGWGLT 1057
            IKGKAMG+T+FINP D   PVHE I+++T GGV Y+FEC+GNLDVLREAFLSTH+GWG+T
Sbjct: 250  IKGKAMGLTDFINPNDSKNPVHEIIQEMTGGGVDYSFECAGNLDVLREAFLSTHEGWGMT 309

Query: 1058 VILGIHPTPRMLPIHPMELFDGRKIVGSVFGDFKGKTQLPHFAEECMRGVVNLDEFITHE 1237
            V+LGIHPTPRMLPIHPMELFDGR+I+GSVFGDFKGKTQLPHFA++CMRGVVNLDEFITHE
Sbjct: 310  VLLGIHPTPRMLPIHPMELFDGRRIIGSVFGDFKGKTQLPHFAQQCMRGVVNLDEFITHE 369

Query: 1238 LPF 1246
            LPF
Sbjct: 370  LPF 372


>ref|XP_003516359.1| PREDICTED: uncharacterized protein LOC100787307 [Glycine max]
          Length = 892

 Score =  527 bits (1357), Expect = e-147
 Identities = 254/375 (67%), Positives = 297/375 (79%), Gaps = 6/375 (1%)
 Frame = +2

Query: 137  MSDESTNNGLSVPGETRGKVINCKAAVVYGPEEPLVIEEVQVAPPQKMEVRIKILYTSIC 316
            M D     G   P +TRGK + CKAAV YGP EP V+E V V PPQKMEVRIKIL+TSIC
Sbjct: 495  MEDPEVIIGSLNPNDTRGKTVTCKAAVAYGPGEPFVVERVLVHPPQKMEVRIKILFTSIC 554

Query: 317  HTDLSAWIGENENQRVYPRILGHEAAGIVESVGEGVVDMKEGDHVIPIFNGECGDCVYCK 496
            HTDLSAW GENE QR YPRI GHEA+GIVESVGEGV DMKEGD V+PIFNGECGDC YCK
Sbjct: 555  HTDLSAWQGENEAQRAYPRIFGHEASGIVESVGEGVNDMKEGDLVVPIFNGECGDCKYCK 614

Query: 497  SEKTNLCGKYRVNPMKSVMDIDGKPRFSTPDGKPIYHFLSTSTFSEYTVLDSACVVKI-- 670
             EKTN+C ++ V+PMK VM  DG  RFST DGKPI+HFL+TSTF+EYTV+DSACVVKI  
Sbjct: 615  CEKTNMCERFGVDPMKKVMASDGATRFSTMDGKPIFHFLNTSTFTEYTVVDSACVVKIHV 674

Query: 671  ----DSKAPLKKMSLLSCGVSTGVGAVWNTANVHSGASVXXXXXXXXXXXXXXXXXXXXX 838
                D    +K+++LLSCGVSTGVGA WNTA+VH G++V                     
Sbjct: 675  DGDGDLNPYIKRLTLLSCGVSTGVGAAWNTADVHFGSAVAVFGLGAVGLSVAEGARARGA 734

Query: 839  TRIIGVDINKDKFIKGKAMGMTEFINPKDLNRPVHEEIKDLTDGGVHYTFECSGNLDVLR 1018
            ++IIGVDIN DKFIK +AMG+T+FINP+D  +PV+E I+++T GGVHY+FEC+GNL+VLR
Sbjct: 735  SKIIGVDINSDKFIKARAMGITDFINPRDDEKPVYERIREMTCGGVHYSFECTGNLNVLR 794

Query: 1019 EAFLSTHDGWGLTVILGIHPTPRMLPIHPMELFDGRKIVGSVFGDFKGKTQLPHFAEECM 1198
            +AFLS H+GWGLTVILGIHP+P++LPIHPMELF GR+IVGSVFG FKGKTQLPHFA+ECM
Sbjct: 795  DAFLSAHEGWGLTVILGIHPSPQLLPIHPMELFQGRRIVGSVFGGFKGKTQLPHFAKECM 854

Query: 1199 RGVVNLDEFITHELP 1243
             GVV LD+FITHELP
Sbjct: 855  DGVVKLDDFITHELP 869


>ref|XP_002518925.1| Alcohol dehydrogenase, putative [Ricinus communis]
            gi|223541912|gb|EEF43458.1| Alcohol dehydrogenase,
            putative [Ricinus communis]
          Length = 425

 Score =  520 bits (1339), Expect = e-145
 Identities = 243/364 (66%), Positives = 296/364 (81%)
 Frame = +2

Query: 155  NNGLSVPGETRGKVINCKAAVVYGPEEPLVIEEVQVAPPQKMEVRIKILYTSICHTDLSA 334
            N  +  P +T GKVI C AAV+ GP++P + E+++V PPQKMEVRIKILYTSICHTDLSA
Sbjct: 40   NQTMFSPSDTMGKVITCNAAVLRGPKQPFLFEKIRVDPPQKMEVRIKILYTSICHTDLSA 99

Query: 335  WIGENENQRVYPRILGHEAAGIVESVGEGVVDMKEGDHVIPIFNGECGDCVYCKSEKTNL 514
            W GENE Q+ +PRILGHEA G+VESVGEGV D+KEGDHVIPIFNGECG CVYCK E TNL
Sbjct: 100  WKGENEAQQAFPRILGHEAVGMVESVGEGVADVKEGDHVIPIFNGECGHCVYCKHETTNL 159

Query: 515  CGKYRVNPMKSVMDIDGKPRFSTPDGKPIYHFLSTSTFSEYTVLDSACVVKIDSKAPLKK 694
            C K+R NP KSVM+ DG+ RFST DG+PI+HFL+TSTF+EY+VLDSACVVKID  +PLK+
Sbjct: 160  CQKFRANPFKSVMENDGRCRFSTKDGEPIFHFLNTSTFTEYSVLDSACVVKIDPNSPLKE 219

Query: 695  MSLLSCGVSTGVGAVWNTANVHSGASVXXXXXXXXXXXXXXXXXXXXXTRIIGVDINKDK 874
            MSLLSCGVSTGVGA WN ANV +G+SV                     +++IGVD+N DK
Sbjct: 220  MSLLSCGVSTGVGAAWNAANVQAGSSVAIFGLGTLGLAAAEGVRARGASKMIGVDVNPDK 279

Query: 875  FIKGKAMGMTEFINPKDLNRPVHEEIKDLTDGGVHYTFECSGNLDVLREAFLSTHDGWGL 1054
            F KGKA G+T+FINPK+ ++PVHE I+++T+GGV Y+FEC+G+L+VLREAFLSTHDGWG 
Sbjct: 280  FEKGKAAGITQFINPKNASKPVHEIIREMTNGGVDYSFECAGHLEVLREAFLSTHDGWGK 339

Query: 1055 TVILGIHPTPRMLPIHPMELFDGRKIVGSVFGDFKGKTQLPHFAEECMRGVVNLDEFITH 1234
            TV++GI+ +P++LP+HPMELFDGR + G++FGDFKGK QLP  A+ CMR VVNLD FITH
Sbjct: 340  TVLVGIYGSPKLLPLHPMELFDGRTVTGTIFGDFKGKRQLPDLAKACMRRVVNLDGFITH 399

Query: 1235 ELPF 1246
            ELPF
Sbjct: 400  ELPF 403


>ref|XP_002333655.1| predicted protein [Populus trichocarpa]
            gi|224117808|ref|XP_002317673.1| predicted protein
            [Populus trichocarpa] gi|222837947|gb|EEE76312.1|
            predicted protein [Populus trichocarpa]
            gi|222860738|gb|EEE98285.1| predicted protein [Populus
            trichocarpa]
          Length = 377

 Score =  517 bits (1332), Expect = e-144
 Identities = 244/355 (68%), Positives = 287/355 (80%)
 Frame = +2

Query: 182  TRGKVINCKAAVVYGPEEPLVIEEVQVAPPQKMEVRIKILYTSICHTDLSAWIGENENQR 361
            T GKVI C AAVV GP++P ++E ++V PP+KMEVRIKILYTSICHTDLSAW GENE QR
Sbjct: 1    TSGKVITCNAAVVRGPKQPFLMETIRVDPPRKMEVRIKILYTSICHTDLSAWKGENEAQR 60

Query: 362  VYPRILGHEAAGIVESVGEGVVDMKEGDHVIPIFNGECGDCVYCKSEKTNLCGKYRVNPM 541
             YPRILGHEA G+VESVGEGV D+K GDHVIPIFNGECG C YC ++ TNLC  YRVNP 
Sbjct: 61   AYPRILGHEAVGLVESVGEGVTDLKAGDHVIPIFNGECGHCPYCTTKTTNLCQTYRVNPF 120

Query: 542  KSVMDIDGKPRFSTPDGKPIYHFLSTSTFSEYTVLDSACVVKIDSKAPLKKMSLLSCGVS 721
            KSVM+ DGK RFST +G+PI+HFL+TSTF+EY+VLDSAC VKID  A LKKMSLLSCGVS
Sbjct: 121  KSVMENDGKCRFSTMNGEPIFHFLNTSTFTEYSVLDSACAVKIDPNAHLKKMSLLSCGVS 180

Query: 722  TGVGAVWNTANVHSGASVXXXXXXXXXXXXXXXXXXXXXTRIIGVDINKDKFIKGKAMGM 901
            TGVGA WN ANV +G+SV                     ++IIGVDIN +KF KGK MGM
Sbjct: 181  TGVGAAWNAANVQAGSSVAIFGLGALGLAASEGARARGASKIIGVDINPEKFDKGKEMGM 240

Query: 902  TEFINPKDLNRPVHEEIKDLTDGGVHYTFECSGNLDVLREAFLSTHDGWGLTVILGIHPT 1081
            T+F+NPKD ++PVH+ I+++T GGV Y+ EC+GN++VLREAFLSTHDGWG TV++GI+PT
Sbjct: 241  TDFVNPKDSSKPVHQRIREMTSGGVDYSIECAGNVEVLREAFLSTHDGWGKTVVVGIYPT 300

Query: 1082 PRMLPIHPMELFDGRKIVGSVFGDFKGKTQLPHFAEECMRGVVNLDEFITHELPF 1246
            P+MLP+HPMELFDGR I G+ FGDFKGK+QLP  A+ CM GVVNLD FITHELPF
Sbjct: 301  PKMLPLHPMELFDGRSISGTTFGDFKGKSQLPELAKACMNGVVNLDGFITHELPF 355


>dbj|BAJ92604.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 394

 Score =  509 bits (1312), Expect = e-142
 Identities = 245/370 (66%), Positives = 288/370 (77%), Gaps = 6/370 (1%)
 Frame = +2

Query: 158  NGLSVPGETRGKVINCKAAVVYGPEEPLVIEEVQVAPPQKMEVRIKILYTSICHTDLSAW 337
            NG S  G T+GK I CKAAV +GP EPLV+EEV+VAPP +MEVR+K+L+TSICHTDLS W
Sbjct: 4    NGYSNGGSTKGKPIKCKAAVAWGPGEPLVMEEVEVAPPARMEVRVKVLFTSICHTDLSFW 63

Query: 338  IGENENQRVYPRILGHEAAGIVESVGEGVVDMKEGDHVIPIFNGECGDCVYCKSEKTNLC 517
             GENE QR +PRILGHEAAG+VESVGEGV D+  GDH++PIFNGECG C +C S  TNLC
Sbjct: 64   RGENERQRRFPRILGHEAAGVVESVGEGVEDLAPGDHIVPIFNGECGTCAHCHSSATNLC 123

Query: 518  GKYRVNPMKSVMDIDGKPRFS----TPDGKPIYHFLSTSTFSEYTVLDSACVVKIDSKAP 685
            G YRVNP KS M  D   RFS    + D  P+YHFL+TSTF+EYTVLD+AC VKI+  AP
Sbjct: 124  GTYRVNPFKSTMVSDDGTRFSVVNTSGDTVPVYHFLNTSTFAEYTVLDAACAVKINPAAP 183

Query: 686  LKKMSLLSCGVSTGVGAVWNTANVHSGASVXXXXXXXXXXXXXXXXXXXXXTRIIGVDIN 865
            L+KM LLSCG+STGVGA WNTANV  G++V                     +RIIGVDIN
Sbjct: 184  LEKMCLLSCGISTGVGAAWNTANVSKGSTVAIFGLGAVGLAVGEGARIRGASRIIGVDIN 243

Query: 866  KDKFIKGKAMGMTEFINPKDLNRPVHEEIKDLTDGGVHYTFECSGNLDVLREAFLSTHDG 1045
             +KF KGK MG+T+FIN K   +PVHE I++LTDGGV Y+FECSGN+DVLREAF+STHDG
Sbjct: 244  PEKFAKGKEMGITDFINAKACGKPVHEVIRELTDGGVDYSFECSGNVDVLREAFVSTHDG 303

Query: 1046 WGLTVILGIHPTPRMLPIHPMELFDGRKIVGSVFGDFKGKTQLPHFAEECMRGVV--NLD 1219
            WGLTV+LGIHPTPRM+P+HPMELFDGR+I GSVFGDFKGK+QLP   ++CM+G V  N D
Sbjct: 304  WGLTVVLGIHPTPRMMPLHPMELFDGRRITGSVFGDFKGKSQLPLLVDQCMQGEVKINFD 363

Query: 1220 EFITHELPFS 1249
             FITHE+PFS
Sbjct: 364  GFITHEMPFS 373


Top