BLASTX nr result
ID: Coptis25_contig00011398
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00011398 (1818 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270318.1| PREDICTED: gamma-tubulin complex component 4... 876 0.0 ref|XP_002523094.1| gamma-tubulin complex component, putative [R... 863 0.0 ref|XP_002320339.1| tubulin gamma complex-associated protein [Po... 841 0.0 ref|XP_003536108.1| PREDICTED: gamma-tubulin complex component 4... 820 0.0 ref|XP_003518990.1| PREDICTED: gamma-tubulin complex component 4... 818 0.0 >ref|XP_002270318.1| PREDICTED: gamma-tubulin complex component 4 homolog [Vitis vinifera] gi|297743902|emb|CBI36872.3| unnamed protein product [Vitis vinifera] Length = 743 Score = 876 bits (2264), Expect = 0.0 Identities = 436/599 (72%), Positives = 497/599 (82%), Gaps = 28/599 (4%) Frame = -1 Query: 1713 GYTGDLIIPH-------------------DSTFKLAPDITFLQTPEREVIERLIKLGYYY 1591 GYTGDLII D TFKLAPD++F+ ER++IE++I LG+YY Sbjct: 11 GYTGDLIIDEREQHKSLGINLSPDAPVSEDRTFKLAPDLSFIHPSERDLIEKVITLGFYY 70 Query: 1590 KELDGFATNARNLSWVNNNNEE---------ERKGSKNSVYRRAIGNGIVEILSIYRSAV 1438 +ELD FAT +R+LSW+ + N + K K+S Y RAI NGIVEILS+YRSAV Sbjct: 71 RELDRFATKSRDLSWIRSTNVSPLSRTSELLKGKPQKSSAYGRAIANGIVEILSVYRSAV 130 Query: 1437 LHVEQVLLSDPVPILASVTQGLNKFFVLLPPLHELIVEIERDDVRGGQLLNLLHKRCHCG 1258 LH+EQ+LLSDP PILA+V QGLNKFFVLLPPL+ELI+EIERDD+ GGQLLNLLHKRCHCG Sbjct: 131 LHIEQILLSDPTPILATVIQGLNKFFVLLPPLYELILEIERDDICGGQLLNLLHKRCHCG 190 Query: 1257 VPELQACIQRLLWHGHQVMYHQLASWMVYGILQDQYGEFFIRRQEDMGVENAPFSLEMIA 1078 VPELQACIQRLLWHGHQVMY+QLASWMVYGILQDQ+GEFFIRRQED VE+ +M+ Sbjct: 191 VPELQACIQRLLWHGHQVMYNQLASWMVYGILQDQHGEFFIRRQEDRDVEHEASPSDMVE 250 Query: 1077 KSVQKSPEDASLTDWHLGFHIYLDMLPDYIHMRVAESVLFSGKAIRVLRNPSPAFKCQDV 898 K + S +DASLTDWHLGFHI+LDMLPDYIHMRVAES+LF+GKAIRVLRNPS AF+ QD Sbjct: 251 KLARMSTDDASLTDWHLGFHIFLDMLPDYIHMRVAESILFAGKAIRVLRNPSSAFRFQDT 310 Query: 897 VSHHQFSRETHKIQGFTGRFALQKEPSVDKKMIGEELLPQPEADKIDAMLQELTESSEFR 718 ++H Q + +H++QG TGRF+ QKEP +D ++IGEELLPQ EADKI+AMLQEL ESSEF Sbjct: 311 LNHQQIPKGSHRVQGLTGRFSFQKEPFMDMQLIGEELLPQSEADKIEAMLQELKESSEFH 370 Query: 717 KRSFEYVVDSIRAIAASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESRHLMR 538 KRSFE VDSIRAIAASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESR +MR Sbjct: 371 KRSFECAVDSIRAIAASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESRQMMR 430 Query: 537 LPPRQSTAESDLMVPFQLAAIKTISDEDKYFSRVSLRMPSFGITMASTQMSLPKVRVSTD 358 LPPRQSTAE+DLMVPFQLAAIKTI DEDKY+SRVSLRMPSFGIT+ S+Q LPK + D Sbjct: 431 LPPRQSTAEADLMVPFQLAAIKTIGDEDKYYSRVSLRMPSFGITVKSSQADLPKEKTYAD 490 Query: 357 ENSGFLSQGNPASEMSLDGWDGIALEYNVDWPLQLFFTQDVLSKYLKVFQYLLRLKRTQM 178 G +SEMSL+GWDGIALEY+VDWPLQLFFTQ+VLSKY +VFQYLLRLKRTQM Sbjct: 491 GILG-------SSEMSLEGWDGIALEYSVDWPLQLFFTQEVLSKYRRVFQYLLRLKRTQM 543 Query: 177 ELEKSWASAMHQDHTEFAKHRHDRINCSISQQRRQGIRPMWRVREHMAFLIRNLQFYIQ 1 ELEKSWAS MHQDHT+FA+HR+D INC++SQQRRQ RPMWR+REHMAFLIRNLQFYIQ Sbjct: 544 ELEKSWASVMHQDHTDFAQHRNDHINCTVSQQRRQRSRPMWRIREHMAFLIRNLQFYIQ 602 >ref|XP_002523094.1| gamma-tubulin complex component, putative [Ricinus communis] gi|223537656|gb|EEF39279.1| gamma-tubulin complex component, putative [Ricinus communis] Length = 756 Score = 863 bits (2229), Expect = 0.0 Identities = 437/600 (72%), Positives = 490/600 (81%), Gaps = 29/600 (4%) Frame = -1 Query: 1713 GYTGDLIIPH-------------------DSTFKLAPDITFLQTPEREVIERLIKLGYYY 1591 GYTGDLII + +FKLAPDI+F+ +R++IER+I LG+YY Sbjct: 11 GYTGDLIIDERGHQKSIGVHLSPDASISDERSFKLAPDISFIDPSDRDLIERIITLGFYY 70 Query: 1590 KELDGFATNARNLSWVNNNN----------EEERKGSKNSVYRRAIGNGIVEILSIYRSA 1441 +ELD FAT +RNLSW+ + N K SVYRRAI NGIVEILS+YRSA Sbjct: 71 RELDRFATKSRNLSWIRSTNVSPLSRANELSSNNNTQKQSVYRRAIANGIVEILSVYRSA 130 Query: 1440 VLHVEQVLLSDPVPILASVTQGLNKFFVLLPPLHELIVEIERDDVRGGQLLNLLHKRCHC 1261 VLH+EQ LLS+ VPILA+VTQGLNKFFVLLPPL+EL++EIERDD+RGGQLLNLLHKR HC Sbjct: 131 VLHIEQKLLSETVPILATVTQGLNKFFVLLPPLYELVLEIERDDIRGGQLLNLLHKRSHC 190 Query: 1260 GVPELQACIQRLLWHGHQVMYHQLASWMVYGILQDQYGEFFIRRQEDMGVENAPFSLEMI 1081 GVPELQ CIQRLLWHGHQVMY+QLASWMVYGILQDQ+GEFFI RQED + N+ +M Sbjct: 191 GVPELQTCIQRLLWHGHQVMYNQLASWMVYGILQDQHGEFFITRQEDRDLVNSSAQPDMS 250 Query: 1080 AKSVQKSPEDASLTDWHLGFHIYLDMLPDYIHMRVAESVLFSGKAIRVLRNPSPAFKCQD 901 K + S +D SLTDWHLGFHI+LDMLP+YIHM VAESVLF+GKAIRVLRNPSPAF+C+D Sbjct: 251 EKLARLSTDDISLTDWHLGFHIFLDMLPEYIHMCVAESVLFAGKAIRVLRNPSPAFQCKD 310 Query: 900 VVSHHQFSRETHKIQGFTGRFALQKEPSVDKKMIGEELLPQPEADKIDAMLQELTESSEF 721 + + Q + IQGF GRF +QKEP VD +IGEELLPQ EADKI+A+LQ L ESSEF Sbjct: 311 SLHNQQVPKGGQNIQGFVGRFPVQKEPFVDSNLIGEELLPQSEADKIEALLQGLKESSEF 370 Query: 720 RKRSFEYVVDSIRAIAASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESRHLM 541 KRSFE VDSIRAIAASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESR LM Sbjct: 371 HKRSFESAVDSIRAIAASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESRQLM 430 Query: 540 RLPPRQSTAESDLMVPFQLAAIKTISDEDKYFSRVSLRMPSFGITMASTQMSLPKVRVST 361 RLPPRQSTAE+DLMVPFQLAAIKTI +EDKYFSRVSLRMPSFGIT+ S+Q+ LPK + + Sbjct: 431 RLPPRQSTAEADLMVPFQLAAIKTIGEEDKYFSRVSLRMPSFGITVKSSQVDLPKSKAHS 490 Query: 360 DENSGFLSQGNPASEMSLDGWDGIALEYNVDWPLQLFFTQDVLSKYLKVFQYLLRLKRTQ 181 D NSG + N ASEM +DGWDGIALEY VDWPLQLFFTQ+VLSKYL+VFQYLLRLKRTQ Sbjct: 491 DSNSG-AALSNAASEMFIDGWDGIALEYAVDWPLQLFFTQEVLSKYLRVFQYLLRLKRTQ 549 Query: 180 MELEKSWASAMHQDHTEFAKHRHDRINCSISQQRRQGIRPMWRVREHMAFLIRNLQFYIQ 1 MELEKSWAS MHQDHT+FAK +DR NCSISQQRRQ RPMWRVREHMAFLIRNLQFYIQ Sbjct: 550 MELEKSWASVMHQDHTDFAKRHNDR-NCSISQQRRQRFRPMWRVREHMAFLIRNLQFYIQ 608 >ref|XP_002320339.1| tubulin gamma complex-associated protein [Populus trichocarpa] gi|222861112|gb|EEE98654.1| tubulin gamma complex-associated protein [Populus trichocarpa] Length = 728 Score = 841 bits (2173), Expect = 0.0 Identities = 428/590 (72%), Positives = 486/590 (82%), Gaps = 19/590 (3%) Frame = -1 Query: 1713 GYTGDLIIPHDS--------------TFKLAPDITFLQTPEREVIERLIKLGYYYKELDG 1576 GYTGDLII +FKLAPDI+F+Q +R++IER+I LG+YY+ELD Sbjct: 11 GYTGDLIIDEREHQNSLGIPISDEHRSFKLAPDISFIQPSDRDLIERIISLGFYYRELDR 70 Query: 1575 FATNARNLSWV---NNNNEEERKG--SKNSVYRRAIGNGIVEILSIYRSAVLHVEQVLLS 1411 FAT +RNLSW+ N NNE K K SVYRRAI NGIVEILS+YRSAVLH+EQ LLS Sbjct: 71 FATKSRNLSWIRSANPNNELSNKNVQDKQSVYRRAIANGIVEILSVYRSAVLHIEQKLLS 130 Query: 1410 DPVPILASVTQGLNKFFVLLPPLHELIVEIERDDVRGGQLLNLLHKRCHCGVPELQACIQ 1231 + +PILA++TQGLNKFFVLLPPL+EL++EIERDD+RGGQLLNLLHKRCHCGVPELQ+CIQ Sbjct: 131 ESIPILATITQGLNKFFVLLPPLYELVLEIERDDIRGGQLLNLLHKRCHCGVPELQSCIQ 190 Query: 1230 RLLWHGHQVMYHQLASWMVYGILQDQYGEFFIRRQEDMGVENAPFSLEMIAKSVQKSPED 1051 RLLWHGHQVMY+QLASW+VYGILQDQ+GEFFIRRQED VE+ + +M K + S +D Sbjct: 191 RLLWHGHQVMYNQLASWVVYGILQDQHGEFFIRRQEDRDVEHGSSNQDMSEKLARLSTDD 250 Query: 1050 ASLTDWHLGFHIYLDMLPDYIHMRVAESVLFSGKAIRVLRNPSPAFKCQDVVSHHQFSRE 871 ASLTDWHLGFHI+LDMLP+Y+HMRVAES+LF+GKAIRVLRNPSPAF+ +D V + Q + Sbjct: 251 ASLTDWHLGFHIFLDMLPEYVHMRVAESILFAGKAIRVLRNPSPAFQFKDPVYNQQIPKG 310 Query: 870 THKIQGFTGRFALQKEPSVDKKMIGEELLPQPEADKIDAMLQELTESSEFRKRSFEYVVD 691 K Q TGRF QKE D +IGEELLPQ EADKI+ ML++L ESSEF KRSFE VD Sbjct: 311 AQKNQVSTGRFPFQKESFEDTNLIGEELLPQSEADKIENMLRDLKESSEFHKRSFECAVD 370 Query: 690 SIRAIAASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESRHLMRLPPRQSTAE 511 SIRAIAASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESR +MRLPPRQSTAE Sbjct: 371 SIRAIAASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESRQMMRLPPRQSTAE 430 Query: 510 SDLMVPFQLAAIKTISDEDKYFSRVSLRMPSFGITMASTQMSLPKVRVSTDENSGFLSQG 331 +DLMVPFQLAAIKTI +E+KYFSRVSLRMPSFG + S+Q+ LPK T S LS Sbjct: 431 ADLMVPFQLAAIKTIGEEEKYFSRVSLRMPSFGSAVKSSQVDLPK----TGSTSASLS-- 484 Query: 330 NPASEMSLDGWDGIALEYNVDWPLQLFFTQDVLSKYLKVFQYLLRLKRTQMELEKSWASA 151 N +SE+SLDGWDGIALEY+VDWPLQLFFTQ+V VFQYLLRLKRTQMELEKSWAS Sbjct: 485 NASSEISLDGWDGIALEYSVDWPLQLFFTQEV------VFQYLLRLKRTQMELEKSWASV 538 Query: 150 MHQDHTEFAKHRHDRINCSISQQRRQGIRPMWRVREHMAFLIRNLQFYIQ 1 MHQDHT+FAK R+DR+NCS+SQQRRQ RPMW VREHMAFLIRNLQFYIQ Sbjct: 539 MHQDHTDFAKRRNDRLNCSVSQQRRQRFRPMWHVREHMAFLIRNLQFYIQ 588 >ref|XP_003536108.1| PREDICTED: gamma-tubulin complex component 4 homolog [Glycine max] Length = 732 Score = 820 bits (2119), Expect = 0.0 Identities = 411/584 (70%), Positives = 480/584 (82%), Gaps = 13/584 (2%) Frame = -1 Query: 1713 GYTGDLIIP------------HDSTFKLAPDITFLQTPEREVIERLIKLGYYYKELDGFA 1570 GYTGDLII + TFKLAPDI F+ +RE+IER+I LG+YY+E++ F+ Sbjct: 11 GYTGDLIIDGRDQLTAETPISDECTFKLAPDIPFIDPSDRELIERIIVLGFYYREMERFS 70 Query: 1569 TNARNLSWVNNNNEEE-RKGSKNSVYRRAIGNGIVEILSIYRSAVLHVEQVLLSDPVPIL 1393 R+LSW+ + N + K K SVYRRA+ +GIVEILS+YRSAVLH+EQ LLS+ +PIL Sbjct: 71 AKCRDLSWIRSANAKPLEKKEKGSVYRRALASGIVEILSVYRSAVLHIEQKLLSETMPIL 130 Query: 1392 ASVTQGLNKFFVLLPPLHELIVEIERDDVRGGQLLNLLHKRCHCGVPELQACIQRLLWHG 1213 A+VTQGLNKF LLPPL+ELI+EIERDD+RGGQLLNLLHKRCHCGVPELQ C+QRLLWHG Sbjct: 131 ATVTQGLNKFLCLLPPLYELILEIERDDIRGGQLLNLLHKRCHCGVPELQTCMQRLLWHG 190 Query: 1212 HQVMYHQLASWMVYGILQDQYGEFFIRRQEDMGVENAPFSLEMIAKSVQKSPEDASLTDW 1033 HQVMY+QLASW+VYGILQDQYGEFFIRRQED VEN+ ++ K + S +DASLTDW Sbjct: 191 HQVMYNQLASWIVYGILQDQYGEFFIRRQEDRDVENSSSHPDISEKLARMSTDDASLTDW 250 Query: 1032 HLGFHIYLDMLPDYIHMRVAESVLFSGKAIRVLRNPSPAFKCQDVVSHHQFSRETHKIQG 853 HLGFHI LDMLP+YI MRVAES+LF+GKA+RVLRNPSP+F+ D V H Q + KI G Sbjct: 251 HLGFHISLDMLPEYIPMRVAESILFAGKAVRVLRNPSPSFQSGDAV-HPQMPKSFQKIHG 309 Query: 852 FTGRFALQKEPSVDKKMIGEELLPQPEADKIDAMLQELTESSEFRKRSFEYVVDSIRAIA 673 GRF Q+EP+++ M GE+LLPQ EADKI+AML L ESSEF KRSFE VDS++AIA Sbjct: 310 LAGRFHFQREPAINMGM-GEDLLPQSEADKIEAMLLNLKESSEFHKRSFECAVDSVQAIA 368 Query: 672 ASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESRHLMRLPPRQSTAESDLMVP 493 ASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESR LMRLPPRQSTAE+DLMVP Sbjct: 369 ASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESRQLMRLPPRQSTAEADLMVP 428 Query: 492 FQLAAIKTISDEDKYFSRVSLRMPSFGITMASTQMSLPKVRVSTDENSGFLSQGNPASEM 313 FQLAA+KTI +EDKYFS+VSLRMPSFGIT+ + + LPK S D +SG S N +SE+ Sbjct: 429 FQLAALKTIGEEDKYFSKVSLRMPSFGITVKPSLLDLPKPTSSIDGSSG-ASLSNASSEV 487 Query: 312 SLDGWDGIALEYNVDWPLQLFFTQDVLSKYLKVFQYLLRLKRTQMELEKSWASAMHQDHT 133 S+DGWDGIALEY+VDWPL LFFTQ+VLSKYL++FQYLLRLKRTQMELEK WAS MHQ H+ Sbjct: 488 SVDGWDGIALEYSVDWPLHLFFTQEVLSKYLRIFQYLLRLKRTQMELEKLWASVMHQYHS 547 Query: 132 EFAKHRHDRINCSISQQRRQGIRPMWRVREHMAFLIRNLQFYIQ 1 +F KHR+D+ CS +QQ+RQ RPMWRVREHMAFL+RNLQFYIQ Sbjct: 548 DFPKHRNDQEKCSEAQQKRQRFRPMWRVREHMAFLVRNLQFYIQ 591 >ref|XP_003518990.1| PREDICTED: gamma-tubulin complex component 4 homolog [Glycine max] Length = 733 Score = 818 bits (2112), Expect = 0.0 Identities = 410/584 (70%), Positives = 477/584 (81%), Gaps = 13/584 (2%) Frame = -1 Query: 1713 GYTGDLIIP------------HDSTFKLAPDITFLQTPEREVIERLIKLGYYYKELDGFA 1570 GYTGDLII ++ TFKLAPDI+F+ +RE+IER+I LG+YY+E++ F+ Sbjct: 11 GYTGDLIIDRRDHLTADTPISYECTFKLAPDISFIDPSDRELIERIIVLGFYYREMERFS 70 Query: 1569 TNARNLSWVNNNNEEE-RKGSKNSVYRRAIGNGIVEILSIYRSAVLHVEQVLLSDPVPIL 1393 R+LSW+ + N K K SVYRRA+ NGIVEILS+YRSAVLH+EQ LLS+ +PIL Sbjct: 71 GKCRDLSWIRSANANPLEKKEKGSVYRRALANGIVEILSVYRSAVLHIEQKLLSENMPIL 130 Query: 1392 ASVTQGLNKFFVLLPPLHELIVEIERDDVRGGQLLNLLHKRCHCGVPELQACIQRLLWHG 1213 A+VTQGLNKF LLPPL+ELI+EIE DD+RGGQLLNLLHKRCHCGVPELQ C+QRLLWHG Sbjct: 131 ATVTQGLNKFLCLLPPLYELILEIEHDDIRGGQLLNLLHKRCHCGVPELQTCMQRLLWHG 190 Query: 1212 HQVMYHQLASWMVYGILQDQYGEFFIRRQEDMGVENAPFSLEMIAKSVQKSPEDASLTDW 1033 HQVMY+QLASW+VYGILQDQYGEFFIRRQED VEN+ ++ K S +DASLTDW Sbjct: 191 HQVMYNQLASWIVYGILQDQYGEFFIRRQEDRDVENSSSHPDISEKLACMSTDDASLTDW 250 Query: 1032 HLGFHIYLDMLPDYIHMRVAESVLFSGKAIRVLRNPSPAFKCQDVVSHHQFSRETHKIQG 853 HLGFHI LDMLP+YI MRVAES+LF+GKA++VLRNPSP+F+ D V H Q + KI G Sbjct: 251 HLGFHISLDMLPEYIPMRVAESILFAGKAVQVLRNPSPSFQSGDAV-HPQMPKSFQKIHG 309 Query: 852 FTGRFALQKEPSVDKKMIGEELLPQPEADKIDAMLQELTESSEFRKRSFEYVVDSIRAIA 673 GRF Q+EP++ M GE+LLPQ EADKI+AML L ESSEF KRSFE VDS++A+A Sbjct: 310 LAGRFHFQREPAIHTGM-GEDLLPQSEADKIEAMLLNLKESSEFHKRSFECAVDSVQAVA 368 Query: 672 ASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESRHLMRLPPRQSTAESDLMVP 493 ASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESR LMRLPPRQSTAE+DLMVP Sbjct: 369 ASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESRQLMRLPPRQSTAEADLMVP 428 Query: 492 FQLAAIKTISDEDKYFSRVSLRMPSFGITMASTQMSLPKVRVSTDENSGFLSQGNPASEM 313 FQLAA+KTI +EDKYFS+VSLRMPSFGIT+ + + LPK S D +SG S N SEM Sbjct: 429 FQLAALKTIGEEDKYFSKVSLRMPSFGITVKPSLLDLPKPTSSVDGSSG-ASLSNALSEM 487 Query: 312 SLDGWDGIALEYNVDWPLQLFFTQDVLSKYLKVFQYLLRLKRTQMELEKSWASAMHQDHT 133 S+DGWDGIALEY+VDWPL LFFTQ+VLSKYL++FQYLLRLKRTQMELEK WAS MHQ H+ Sbjct: 488 SVDGWDGIALEYSVDWPLHLFFTQEVLSKYLRIFQYLLRLKRTQMELEKLWASVMHQYHS 547 Query: 132 EFAKHRHDRINCSISQQRRQGIRPMWRVREHMAFLIRNLQFYIQ 1 +F KHR+D+ CS +QQ+RQ RPMWRVREHMAFL+RNLQFYIQ Sbjct: 548 DFPKHRNDQEKCSEAQQKRQRFRPMWRVREHMAFLVRNLQFYIQ 591