BLASTX nr result
ID: Coptis25_contig00011388
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011388
(1740 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein lig... 648 0.0
emb|CBI23000.3| unnamed protein product [Vitis vinifera] 648 0.0
emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera] 645 0.0
ref|XP_002516937.1| nucleotide binding protein, putative [Ricinu... 621 0.0
ref|XP_002328632.1| predicted protein [Populus trichocarpa] gi|2... 597 e-175
>ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
vinifera]
Length = 1339
Score = 648 bits (1671), Expect(2) = 0.0
Identities = 320/501 (63%), Positives = 392/501 (78%)
Frame = +2
Query: 5 MAPFIHLLGSKEKPAKITALQFFHEILQMPRSSTISLLHQIKQPDAINTTNVLMSCIQQL 184
MAPFI+LL S ++ K+ AL+FFHEIL+MPRSS IS+L Q+K+ +IN ++L+ C+QQ
Sbjct: 744 MAPFIYLLRSNKRRVKLIALEFFHEILRMPRSSAISVLQQMKKEGSINIMHILLPCLQQS 803
Query: 185 EPEYQILASNLLLQLDMLEDASGNNILREEVVEVLLKAIXXXXXXXXXXXXXXXXXNLGG 364
+ E+Q+LA+NLLLQLD LED+SG ++ REE +EVLL+++ NLGG
Sbjct: 804 QAEHQLLAANLLLQLDQLEDSSGRSMFREEAMEVLLESMVCEENSATQILSAFILSNLGG 863
Query: 365 AYSSTGEPYTAAWLVKKIGLTSIHHKNMIRNFDWSDESLQDGGTDAWCSKVARCIIMMGE 544
YS TGEPYT AWLVKK GLTS++H+NMIRNFDW D+SLQD GTD WCSK+ R II G
Sbjct: 864 TYSWTGEPYTVAWLVKKAGLTSLYHRNMIRNFDWLDQSLQDTGTDTWCSKIGRSIIKGGI 923
Query: 545 PVFQALGKGLKSKIKSVSRSCLIAITWLGCEITKIAPIDLRCTACEILLSGIEHFLHPGS 724
P+F AL KGLKSK++ VSR CL AI WLG EI P +LR +ACEILLSGIE FLHPG
Sbjct: 924 PLFHALEKGLKSKVRRVSRDCLTAIAWLGYEIAT-TPNELRYSACEILLSGIEQFLHPGL 982
Query: 725 DLEERLLACLSIYNYASGKGMQKLIGLSEGARESLRRLSSITWIADELLKVSEYFLPAQS 904
DLEERLLACL IYNY SGKGMQKLI SEG RESL RLS+ITW+A+ELLK+++YFLP +S
Sbjct: 983 DLEERLLACLCIYNYTSGKGMQKLIHFSEGVRESLGRLSNITWMAEELLKIADYFLPYKS 1042
Query: 905 RISCVHTQVLEAGYNCGVAASALIYYKGQLHSGHFDGSIKVWDIREQTATLVWEVKEHKK 1084
ISCVHTQ+LE G C A +ALIYY+GQL SG+ DGSIKVWDI+ Q+ATLV ++KEH+K
Sbjct: 1043 HISCVHTQILEMGRKCSGAVTALIYYRGQLCSGYSDGSIKVWDIKGQSATLVLDIKEHRK 1102
Query: 1085 AVTCFTLSEPGDSLLSGSADRTIRVWQMVQRRLACVEVIETKEPIHKIESYKESIFALTQ 1264
AVTCF+ EPGDSLLSGSAD+TIRVWQMV+R++ C EVI TKEP+ ++++ + IF +T
Sbjct: 1103 AVTCFSHFEPGDSLLSGSADKTIRVWQMVKRKMECTEVISTKEPVQNLDTHGQLIFTVTH 1162
Query: 1265 SRGVKVFDASRTVKRIYKSKHVKCMAVVQRKLYLGCKDSSIQEVDIANERIKEIKAPNKR 1444
GVKVFDASR VK I KSKHVKC+ VVQ +LY+GC DSSIQEV I R +EI+AP K
Sbjct: 1163 GHGVKVFDASRKVKDICKSKHVKCVRVVQGRLYIGCMDSSIQEVVITRAREQEIRAPAKS 1222
Query: 1445 WWAKNKPINDILVYRDWLYSA 1507
W +N+PIN I+VY+DWLYSA
Sbjct: 1223 WRMQNRPINSIVVYKDWLYSA 1243
Score = 50.8 bits (120), Expect(2) = 0.0
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +1
Query: 1612 QERRKERNPQMSIPMEKGKRVQAMGVVEDFIYVNCSLSPSIIE 1740
+E ++ PQMS+ +KG V AMG+VEDFIY+NCS S SI++
Sbjct: 1253 KEWKRHSKPQMSMVPDKGASVLAMGIVEDFIYLNCSSSTSILQ 1295
>emb|CBI23000.3| unnamed protein product [Vitis vinifera]
Length = 1274
Score = 648 bits (1671), Expect(2) = 0.0
Identities = 320/501 (63%), Positives = 392/501 (78%)
Frame = +2
Query: 5 MAPFIHLLGSKEKPAKITALQFFHEILQMPRSSTISLLHQIKQPDAINTTNVLMSCIQQL 184
MAPFI+LL S ++ K+ AL+FFHEIL+MPRSS IS+L Q+K+ +IN ++L+ C+QQ
Sbjct: 679 MAPFIYLLRSNKRRVKLIALEFFHEILRMPRSSAISVLQQMKKEGSINIMHILLPCLQQS 738
Query: 185 EPEYQILASNLLLQLDMLEDASGNNILREEVVEVLLKAIXXXXXXXXXXXXXXXXXNLGG 364
+ E+Q+LA+NLLLQLD LED+SG ++ REE +EVLL+++ NLGG
Sbjct: 739 QAEHQLLAANLLLQLDQLEDSSGRSMFREEAMEVLLESMVCEENSATQILSAFILSNLGG 798
Query: 365 AYSSTGEPYTAAWLVKKIGLTSIHHKNMIRNFDWSDESLQDGGTDAWCSKVARCIIMMGE 544
YS TGEPYT AWLVKK GLTS++H+NMIRNFDW D+SLQD GTD WCSK+ R II G
Sbjct: 799 TYSWTGEPYTVAWLVKKAGLTSLYHRNMIRNFDWLDQSLQDTGTDTWCSKIGRSIIKGGI 858
Query: 545 PVFQALGKGLKSKIKSVSRSCLIAITWLGCEITKIAPIDLRCTACEILLSGIEHFLHPGS 724
P+F AL KGLKSK++ VSR CL AI WLG EI P +LR +ACEILLSGIE FLHPG
Sbjct: 859 PLFHALEKGLKSKVRRVSRDCLTAIAWLGYEIAT-TPNELRYSACEILLSGIEQFLHPGL 917
Query: 725 DLEERLLACLSIYNYASGKGMQKLIGLSEGARESLRRLSSITWIADELLKVSEYFLPAQS 904
DLEERLLACL IYNY SGKGMQKLI SEG RESL RLS+ITW+A+ELLK+++YFLP +S
Sbjct: 918 DLEERLLACLCIYNYTSGKGMQKLIHFSEGVRESLGRLSNITWMAEELLKIADYFLPYKS 977
Query: 905 RISCVHTQVLEAGYNCGVAASALIYYKGQLHSGHFDGSIKVWDIREQTATLVWEVKEHKK 1084
ISCVHTQ+LE G C A +ALIYY+GQL SG+ DGSIKVWDI+ Q+ATLV ++KEH+K
Sbjct: 978 HISCVHTQILEMGRKCSGAVTALIYYRGQLCSGYSDGSIKVWDIKGQSATLVLDIKEHRK 1037
Query: 1085 AVTCFTLSEPGDSLLSGSADRTIRVWQMVQRRLACVEVIETKEPIHKIESYKESIFALTQ 1264
AVTCF+ EPGDSLLSGSAD+TIRVWQMV+R++ C EVI TKEP+ ++++ + IF +T
Sbjct: 1038 AVTCFSHFEPGDSLLSGSADKTIRVWQMVKRKMECTEVISTKEPVQNLDTHGQLIFTVTH 1097
Query: 1265 SRGVKVFDASRTVKRIYKSKHVKCMAVVQRKLYLGCKDSSIQEVDIANERIKEIKAPNKR 1444
GVKVFDASR VK I KSKHVKC+ VVQ +LY+GC DSSIQEV I R +EI+AP K
Sbjct: 1098 GHGVKVFDASRKVKDICKSKHVKCVRVVQGRLYIGCMDSSIQEVVITRAREQEIRAPAKS 1157
Query: 1445 WWAKNKPINDILVYRDWLYSA 1507
W +N+PIN I+VY+DWLYSA
Sbjct: 1158 WRMQNRPINSIVVYKDWLYSA 1178
Score = 50.8 bits (120), Expect(2) = 0.0
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +1
Query: 1612 QERRKERNPQMSIPMEKGKRVQAMGVVEDFIYVNCSLSPSIIE 1740
+E ++ PQMS+ +KG V AMG+VEDFIY+NCS S SI++
Sbjct: 1188 KEWKRHSKPQMSMVPDKGASVLAMGIVEDFIYLNCSSSTSILQ 1230
>emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]
Length = 1378
Score = 645 bits (1665), Expect(2) = 0.0
Identities = 319/501 (63%), Positives = 391/501 (78%)
Frame = +2
Query: 5 MAPFIHLLGSKEKPAKITALQFFHEILQMPRSSTISLLHQIKQPDAINTTNVLMSCIQQL 184
MAPFI+LL S ++ K+ AL+FFHEIL+MPRSS IS+L Q+K+ +IN ++L+ C+QQ
Sbjct: 744 MAPFIYLLRSNKRRVKLIALEFFHEILRMPRSSAISVLQQMKKEGSINIMHILLPCLQQS 803
Query: 185 EPEYQILASNLLLQLDMLEDASGNNILREEVVEVLLKAIXXXXXXXXXXXXXXXXXNLGG 364
+ E+Q+LA+NLLLQLD LED+SG ++ REE +EVLL+++ NLGG
Sbjct: 804 QAEHQLLAANLLLQLDQLEDSSGRSMFREEAMEVLLESMVCEENSATQILSAFILSNLGG 863
Query: 365 AYSSTGEPYTAAWLVKKIGLTSIHHKNMIRNFDWSDESLQDGGTDAWCSKVARCIIMMGE 544
YS TGEPYT AWLVKK GLTS++H+NMIRNFDW D+SLQD GTD WCSK+ R II G
Sbjct: 864 TYSWTGEPYTVAWLVKKAGLTSLYHRNMIRNFDWLDQSLQDTGTDTWCSKIGRSIIKGGI 923
Query: 545 PVFQALGKGLKSKIKSVSRSCLIAITWLGCEITKIAPIDLRCTACEILLSGIEHFLHPGS 724
P+F AL KGLKSK++ VSR CL AI WLG EI P +LR +ACEILLSGIE FLHPG
Sbjct: 924 PLFHALEKGLKSKVRRVSRDCLTAIAWLGYEIAT-TPNELRYSACEILLSGIEQFLHPGL 982
Query: 725 DLEERLLACLSIYNYASGKGMQKLIGLSEGARESLRRLSSITWIADELLKVSEYFLPAQS 904
DLEERLLACL YNY SGKGMQKLI SEG RESL RLS+ITW+A+ELLK+++YFLP +S
Sbjct: 983 DLEERLLACLCXYNYTSGKGMQKLIHFSEGVRESLGRLSNITWMAEELLKIADYFLPYKS 1042
Query: 905 RISCVHTQVLEAGYNCGVAASALIYYKGQLHSGHFDGSIKVWDIREQTATLVWEVKEHKK 1084
ISCVHTQ+LE G C A +ALIYY+GQL SG+ DGSIKVWDI+ Q+ATLV ++KEH+K
Sbjct: 1043 XISCVHTQILEMGRKCSGAVTALIYYRGQLCSGYSDGSIKVWDIKGQSATLVLDIKEHRK 1102
Query: 1085 AVTCFTLSEPGDSLLSGSADRTIRVWQMVQRRLACVEVIETKEPIHKIESYKESIFALTQ 1264
AVTCF+ EPGDSLLSGSAD+TIRVWQMV+R++ C EVI TKEP+ ++++ + IF +T
Sbjct: 1103 AVTCFSHFEPGDSLLSGSADKTIRVWQMVKRKMECTEVISTKEPVQNLDTHGQLIFTVTH 1162
Query: 1265 SRGVKVFDASRTVKRIYKSKHVKCMAVVQRKLYLGCKDSSIQEVDIANERIKEIKAPNKR 1444
GVKVFDASR VK I KSKHVKC+ VVQ +LY+GC DSSIQEV I R +EI+AP K
Sbjct: 1163 GHGVKVFDASRKVKDICKSKHVKCVRVVQGRLYIGCMDSSIQEVVITRAREQEIRAPAKS 1222
Query: 1445 WWAKNKPINDILVYRDWLYSA 1507
W +N+PIN I+VY+DWLYSA
Sbjct: 1223 WRMQNRPINSIVVYKDWLYSA 1243
Score = 50.8 bits (120), Expect(2) = 0.0
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +1
Query: 1612 QERRKERNPQMSIPMEKGKRVQAMGVVEDFIYVNCSLSPSIIE 1740
+E ++ PQMS+ +KG V AMG+VEDFIY+NCS S SI++
Sbjct: 1253 KEWKRHSKPQMSMVPDKGASVLAMGIVEDFIYLNCSSSTSILQ 1295
>ref|XP_002516937.1| nucleotide binding protein, putative [Ricinus communis]
gi|223544025|gb|EEF45551.1| nucleotide binding protein,
putative [Ricinus communis]
Length = 1357
Score = 621 bits (1602), Expect(2) = 0.0
Identities = 306/501 (61%), Positives = 382/501 (76%)
Frame = +2
Query: 5 MAPFIHLLGSKEKPAKITALQFFHEILQMPRSSTISLLHQIKQPDAINTTNVLMSCIQQL 184
+APF LL S EK AK TALQFFHE+L MPRSS ISLL +I + + + LM C+QQL
Sbjct: 762 LAPFKRLLQSNEKHAKFTALQFFHELLYMPRSSAISLLQRIGKEGSNDIMPSLMQCLQQL 821
Query: 185 EPEYQILASNLLLQLDMLEDASGNNILREEVVEVLLKAIXXXXXXXXXXXXXXXXXNLGG 364
+P+YQ+LA+NLLLQLD LE +SG N+ REE ++++LK++ N+GG
Sbjct: 822 QPDYQLLAANLLLQLDTLEQSSGKNMYREEAMQIILKSVASEENSALQQLSTFILANIGG 881
Query: 365 AYSSTGEPYTAAWLVKKIGLTSIHHKNMIRNFDWSDESLQDGGTDAWCSKVARCIIMMGE 544
Y+ TGEPYT A LVKK GLTS++H+ MIRN DWSD SLQD G D+WCSK+A+ II +G+
Sbjct: 882 TYTWTGEPYTVALLVKKAGLTSLYHRTMIRNVDWSDPSLQDAGIDSWCSKIAKGIISIGK 941
Query: 545 PVFQALGKGLKSKIKSVSRSCLIAITWLGCEITKIAPIDLRCTACEILLSGIEHFLHPGS 724
P FQAL GL+S K VSR L AI W+GCEI K P LR +ACEILL+G+E FLHPG
Sbjct: 942 PAFQALESGLRSNTKRVSRDSLTAIAWIGCEIAKY-PNSLRNSACEILLNGVEQFLHPGR 1000
Query: 725 DLEERLLACLSIYNYASGKGMQKLIGLSEGARESLRRLSSITWIADELLKVSEYFLPAQS 904
+LEERLLACL IYNY SG+GMQKLI SEG RESLRR S +TW+A+EL +V+E++LP S
Sbjct: 1001 ELEERLLACLCIYNYTSGRGMQKLIHFSEGVRESLRRFSGVTWMAEELHRVAEFYLPNNS 1060
Query: 905 RISCVHTQVLEAGYNCGVAASALIYYKGQLHSGHFDGSIKVWDIREQTATLVWEVKEHKK 1084
RISCVHTQVLE ++ A +ALIY++GQL+SG+ DGSIKVWDI+ Q+ATLVW++KEHKK
Sbjct: 1061 RISCVHTQVLETKHDRSGAVTALIYFRGQLYSGYSDGSIKVWDIKHQSATLVWDLKEHKK 1120
Query: 1085 AVTCFTLSEPGDSLLSGSADRTIRVWQMVQRRLACVEVIETKEPIHKIESYKESIFALTQ 1264
AVTCF+L E G+ LLSGSAD+TIRVWQMV R+L CVEVI KEPI KIE+Y +++F +TQ
Sbjct: 1121 AVTCFSLFELGERLLSGSADKTIRVWQMVNRKLECVEVIAMKEPIQKIETYGQTMFIITQ 1180
Query: 1265 SRGVKVFDASRTVKRIYKSKHVKCMAVVQRKLYLGCKDSSIQEVDIANERIKEIKAPNKR 1444
G+KV D+SRTVK + K+K KCM+ VQ KLY+GC DSSIQE+ + N R +EIK P K
Sbjct: 1181 GHGMKVLDSSRTVKDLCKNKKFKCMSAVQGKLYIGCTDSSIQELTMTNNREREIKPPMKS 1240
Query: 1445 WWAKNKPINDILVYRDWLYSA 1507
W +NKPIN I +++DWLYSA
Sbjct: 1241 WMMQNKPINSIALHKDWLYSA 1261
Score = 52.0 bits (123), Expect(2) = 0.0
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +1
Query: 1609 VQERRKERNPQMSIPMEKGKRVQAMGVVEDFIYVNCSLSPSIIE 1740
V+E R PQMSI +KG+ + A+GVVEDFIY+NCS S S ++
Sbjct: 1270 VKELRTHSKPQMSIAPDKGRYILALGVVEDFIYLNCSSSTSTLQ 1313
>ref|XP_002328632.1| predicted protein [Populus trichocarpa] gi|222838614|gb|EEE76979.1|
predicted protein [Populus trichocarpa]
Length = 1305
Score = 597 bits (1538), Expect(2) = e-175
Identities = 298/517 (57%), Positives = 379/517 (73%), Gaps = 16/517 (3%)
Frame = +2
Query: 5 MAPFIHLLGSKEKPAKITALQFFHEILQMPR----------------SSTISLLHQIKQP 136
+APFI LL S EK AK AL+FFHE+L+MPR S +LL QI++
Sbjct: 694 VAPFIRLLQSNEKGAKFAALRFFHELLRMPRYEFQNENTRMLWFSVQSPATNLLQQIRKE 753
Query: 137 DAINTTNVLMSCIQQLEPEYQILASNLLLQLDMLEDASGNNILREEVVEVLLKAIXXXXX 316
VL+ C+++L +YQ+LA+NLLLQLD LE++S +EE ++V+LK++
Sbjct: 754 GGTKIMKVLVYCVRELPTDYQLLAANLLLQLDTLEESSEKGSFKEEAIQVILKSVDSEVS 813
Query: 317 XXXXXXXXXXXXNLGGAYSSTGEPYTAAWLVKKIGLTSIHHKNMIRNFDWSDESLQDGGT 496
NLGG Y+ TGEPYT AWLVKK GLTS+ H+NMIRN+DW D++LQDG
Sbjct: 814 SPTQQLSAFIFANLGGTYAWTGEPYTVAWLVKKAGLTSLCHRNMIRNYDWLDQNLQDGVV 873
Query: 497 DAWCSKVARCIIMMGEPVFQALGKGLKSKIKSVSRSCLIAITWLGCEITKIAPIDLRCTA 676
D+W SK+ + +I +G+PVF AL KGL+SK K VSR L AI W+G EI + P LR +A
Sbjct: 874 DSWSSKIGKHVIDVGKPVFHALEKGLRSKAKRVSRDSLTAIAWIGFEIAR-CPTSLRYSA 932
Query: 677 CEILLSGIEHFLHPGSDLEERLLACLSIYNYASGKGMQKLIGLSEGARESLRRLSSITWI 856
CEILL GIE FLHPG +LEERLLACL IYNYASG+GMQKLI SEG RESLRR S +TW+
Sbjct: 933 CEILLGGIEQFLHPGLELEERLLACLCIYNYASGRGMQKLIHFSEGVRESLRRFSGVTWM 992
Query: 857 ADELLKVSEYFLPAQSRISCVHTQVLEAGYNCGVAASALIYYKGQLHSGHFDGSIKVWDI 1036
ADEL +V++Y+LP QSRISCVHTQ+LEA + A ++LIYYKG L+SGH DGSIKVWDI
Sbjct: 993 ADELHRVADYYLPNQSRISCVHTQILEASDSSSGAITSLIYYKGLLYSGHSDGSIKVWDI 1052
Query: 1037 REQTATLVWEVKEHKKAVTCFTLSEPGDSLLSGSADRTIRVWQMVQRRLACVEVIETKEP 1216
++Q+AT++W++KEHKKAVTCF+L E G+SLLSGS+D+TIRVW+MVQR+ C EVI +EP
Sbjct: 1053 KQQSATIIWDLKEHKKAVTCFSLFEAGESLLSGSSDKTIRVWKMVQRKPECTEVIAMEEP 1112
Query: 1217 IHKIESYKESIFALTQSRGVKVFDASRTVKRIYKSKHVKCMAVVQRKLYLGCKDSSIQEV 1396
I ++E Y + IF +TQ +KV+D+SRT + I K+K VK M VVQ K+Y+GCKDSSIQE+
Sbjct: 1113 IRQLEKYDQMIFVITQGHRMKVYDSSRTARDICKAKKVKSMRVVQGKIYIGCKDSSIQEL 1172
Query: 1397 DIANERIKEIKAPNKRWWAKNKPINDILVYRDWLYSA 1507
IA +R +EIKAP K W + KPIN I+VYRDWLYSA
Sbjct: 1173 TIATKREQEIKAPTKSWIMQKKPINAIVVYRDWLYSA 1209
Score = 45.8 bits (107), Expect(2) = e-175
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +1
Query: 1609 VQERRKERNPQMSIPMEKGKRVQAMGVVEDFIYVNCSLSPSIIE 1740
V+E R P++SI +KG+ V MGVVEDFIY+N S S S ++
Sbjct: 1218 VKEWRTHHKPRISIAADKGRNVLLMGVVEDFIYLNSSSSTSTLQ 1261