BLASTX nr result

ID: Coptis25_contig00011364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011364
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533682.1| conserved hypothetical protein [Ricinus comm...   178   5e-43
ref|XP_002310309.1| predicted protein [Populus trichocarpa] gi|2...   177   6e-43
ref|XP_003613048.1| MscS-Like mechanosensitive ion channel MSCL8...   177   1e-42
ref|XP_003635223.1| PREDICTED: uncharacterized protein LOC100855...   176   1e-42
ref|XP_003533418.1| PREDICTED: uncharacterized protein LOC100796...   176   1e-42

>ref|XP_002533682.1| conserved hypothetical protein [Ricinus communis]
           gi|223526417|gb|EEF28698.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 654

 Score =  178 bits (451), Expect = 5e-43
 Identities = 84/101 (83%), Positives = 86/101 (85%)
 Frame = +2

Query: 2   TQKWXXXXXXXXXXXXXXXREIFTNFLSSAMIHATRPFIVNEWIQTKIEGYDVSGTVEHV 181
           TQKW               REIFTNFLSSAMIHATRPF+VNEWIQTKIEGY+VSGTVEHV
Sbjct: 167 TQKWLTAGGLGTVLLTLAGREIFTNFLSSAMIHATRPFVVNEWIQTKIEGYEVSGTVEHV 226

Query: 182 GWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKT 304
           GWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKT
Sbjct: 227 GWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKT 267


>ref|XP_002310309.1| predicted protein [Populus trichocarpa] gi|222853212|gb|EEE90759.1|
           predicted protein [Populus trichocarpa]
          Length = 576

 Score =  177 bits (450), Expect = 6e-43
 Identities = 83/101 (82%), Positives = 86/101 (85%)
 Frame = +2

Query: 2   TQKWXXXXXXXXXXXXXXXREIFTNFLSSAMIHATRPFIVNEWIQTKIEGYDVSGTVEHV 181
           TQKW               REIFTNFLSSAMIHATRPF+VNEWIQTKIEGY+VSGTVEHV
Sbjct: 131 TQKWLTAGGLGTVLLTLAGREIFTNFLSSAMIHATRPFVVNEWIQTKIEGYEVSGTVEHV 190

Query: 182 GWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKT 304
           GWWSPTI+RGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKT
Sbjct: 191 GWWSPTIVRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKT 231


>ref|XP_003613048.1| MscS-Like mechanosensitive ion channel MSCL8 [Medicago truncatula]
           gi|355514383|gb|AES96006.1| MscS-Like mechanosensitive
           ion channel MSCL8 [Medicago truncatula]
          Length = 735

 Score =  177 bits (448), Expect = 1e-42
 Identities = 83/101 (82%), Positives = 86/101 (85%)
 Frame = +2

Query: 2   TQKWXXXXXXXXXXXXXXXREIFTNFLSSAMIHATRPFIVNEWIQTKIEGYDVSGTVEHV 181
           TQKW               REIFTNFLSSAMIHATRPF+VNEWIQTKIEGY+VSGTVEHV
Sbjct: 258 TQKWVTAGGFGTVLLTLAGREIFTNFLSSAMIHATRPFVVNEWIQTKIEGYEVSGTVEHV 317

Query: 182 GWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKT 304
           GWWSPTIIRGEDREAVHIPNHKFTVNVVRNL+QKTHWRIKT
Sbjct: 318 GWWSPTIIRGEDREAVHIPNHKFTVNVVRNLTQKTHWRIKT 358


>ref|XP_003635223.1| PREDICTED: uncharacterized protein LOC100855017 [Vitis vinifera]
          Length = 425

 Score =  176 bits (447), Expect = 1e-42
 Identities = 82/101 (81%), Positives = 86/101 (85%)
 Frame = +2

Query: 2   TQKWXXXXXXXXXXXXXXXREIFTNFLSSAMIHATRPFIVNEWIQTKIEGYDVSGTVEHV 181
           TQKW               REIFTNFLSSAMIHATRPF+VNEWIQT+IEGY+VSGTVEHV
Sbjct: 261 TQKWLTAGGLGTVLLTLAGREIFTNFLSSAMIHATRPFVVNEWIQTRIEGYEVSGTVEHV 320

Query: 182 GWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKT 304
           GWWSPTI+RGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKT
Sbjct: 321 GWWSPTIVRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKT 361


>ref|XP_003533418.1| PREDICTED: uncharacterized protein LOC100796304 [Glycine max]
          Length = 719

 Score =  176 bits (447), Expect = 1e-42
 Identities = 83/101 (82%), Positives = 85/101 (84%)
 Frame = +2

Query: 2   TQKWXXXXXXXXXXXXXXXREIFTNFLSSAMIHATRPFIVNEWIQTKIEGYDVSGTVEHV 181
           TQKW               REIFTNFLSS MIHATRPF+VNEWIQTKIEGY+VSGTVEHV
Sbjct: 260 TQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHV 319

Query: 182 GWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKT 304
           GWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKT
Sbjct: 320 GWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKT 360


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