BLASTX nr result
ID: Coptis25_contig00011358
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011358
(2949 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat an... 749 0.0
emb|CBI15364.3| unnamed protein product [Vitis vinifera] 746 0.0
ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding... 663 0.0
ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding... 639 e-180
gb|EEC84140.1| hypothetical protein OsI_30493 [Oryza sativa Indi... 626 e-176
>ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding
protein 1-like [Vitis vinifera]
Length = 965
Score = 749 bits (1933), Expect = 0.0
Identities = 405/646 (62%), Positives = 482/646 (74%), Gaps = 17/646 (2%)
Frame = -3
Query: 2107 QEHGNLGNLSDADEDSFGESELVSRKRLRKQSEYDNMLDEDSDDQLM--LPXXXXXXXXX 1934
QE G+LSD EDS GESE SRKRLRKQS YD ED +D L+ LP
Sbjct: 339 QEPSASGSLSDLGEDSHGESEPPSRKRLRKQSTYD----EDINDDLLSSLPKVESRKKAS 394
Query: 1933 XXXKETLDDGNDKLQSLVKSGKPKMQEAFQPGSTPIQTGKRHFLCYNMLGSITTIENEGY 1754
KE+L++GN+ L+S S + KMQEAFQPG+TP+Q GKR FLCYNMLGSITTIE++GY
Sbjct: 395 HSHKESLNNGNEGLKSTT-SARLKMQEAFQPGATPVQPGKRRFLCYNMLGSITTIEHDGY 453
Query: 1753 SHIEVDFHDTGRGPRVPSMTDYFGFTMASLNESGSVFANPCKGEKNMSTLMYRPFSSWAN 1574
SHIE+DFHDTG GPRVP+MTDYFGFTMASLNE GSVFANPCKGEKNMSTLMYRPFS+WAN
Sbjct: 454 SHIEIDFHDTGSGPRVPAMTDYFGFTMASLNEHGSVFANPCKGEKNMSTLMYRPFSTWAN 513
Query: 1573 NSEWSMRFEAEEVKVVALGAGWIAAATSLNFLRIFTEGGLQRHVLSLDGPVVTAAGFKDE 1394
NSEWSMRFE EEVKVVALG+ W+AA TSLNFLRIFT+GGLQR+V+SLDGPVVTA+GFKDE
Sbjct: 514 NSEWSMRFEQEEVKVVALGSAWVAAVTSLNFLRIFTDGGLQRYVISLDGPVVTASGFKDE 573
Query: 1393 LAVVTHASHFLPSNDQMLEFRVLNISNGTQPLRGHLPLTPGSCLSWFGFTEEGQLSSYDS 1214
LAVVTHASH LPSNDQML+FRV NISNGTQPL+GH+PLTPGSCL+WFGF+EEGQLSSYDS
Sbjct: 574 LAVVTHASHCLPSNDQMLKFRVFNISNGTQPLKGHVPLTPGSCLTWFGFSEEGQLSSYDS 633
Query: 1213 EGTLRVFTNQFGGSWIPLFSASKEKKSDESYWMVGLNASKVFCIVCKTPDLYPPVMPKPV 1034
+G LRVFTNQFGGSW+PLFSASKE KS+E+YW+ GLN +K+FCIVCK+PDL+PPVMPKPV
Sbjct: 634 KGVLRVFTNQFGGSWLPLFSASKE-KSEENYWVAGLNMNKLFCIVCKSPDLFPPVMPKPV 692
Query: 1033 LTLLGLSIPLASSDLGADDLEKEFILSNLNLTQAEKKIEELAAAGLDTSSQDKEAFDLEF 854
LTLL LS PLA+SDLGA+ LE EFIL N++L Q +++IEE+AAAGLDT+S D EAF++E
Sbjct: 693 LTLLDLSFPLATSDLGAETLENEFILKNMHLLQIQQRIEEMAAAGLDTTSLDDEAFNVET 752
Query: 853 SLDKCILRLIAACCNGDKLVRAIELVRLLSSEKSVKTAINLVSKLKLPVLAERFSGILEE 674
+LD+CILRLIA+CCNGDK+VRA ELV+LLS EKSVK AI LV+ LKLP LAERF+ ILEE
Sbjct: 753 ALDRCILRLIASCCNGDKIVRATELVKLLSLEKSVKGAIKLVTALKLPNLAERFNSILEE 812
Query: 673 RLLKETV-GAAVPFLLSNEALAHSAEVNKLEWV----QTKVPEAEIALPPPKFSSTQLLX 509
RLL ET A +P SN + + +V +++ +K + I LP P+ SS
Sbjct: 813 RLLNETSRPATLPLTSSNHDASTTPDVVMSKFLTSIQSSKPSQPVIPLPSPQLSSP---- 868
Query: 508 XXXXXXXXXXXXXXXSNITRVEGNMKDQANC--EKLHLPANTIPKXXXXXXXXXXXXLTK 335
+ +G +++ A EK+ I + +
Sbjct: 869 -----------------LFAKKGKLQEGAKVGNEKVEQRRTAIVENIGKVKSLAEVKSIE 911
Query: 334 TDSNDGASETQTI-------RPSNPFAKALSNQ-TSSVFDSIKKMK 221
+N G + I RPSNPFAK+ SNQ SS+FD+IKKMK
Sbjct: 912 DVTNQGEASIGEIKNGAVNQRPSNPFAKSSSNQEKSSLFDAIKKMK 957
>emb|CBI15364.3| unnamed protein product [Vitis vinifera]
Length = 1427
Score = 746 bits (1925), Expect = 0.0
Identities = 404/646 (62%), Positives = 481/646 (74%), Gaps = 17/646 (2%)
Frame = -3
Query: 2107 QEHGNLGNLSDADEDSFGESELVSRKRLRKQSEYDNMLDEDSDDQLM--LPXXXXXXXXX 1934
QE G+LSD EDS GESE SRKRLRKQS YD ED +D L+ LP
Sbjct: 300 QEPSASGSLSDLGEDSHGESEPPSRKRLRKQSTYD----EDINDDLLSSLPKVESRKKAS 355
Query: 1933 XXXKETLDDGNDKLQSLVKSGKPKMQEAFQPGSTPIQTGKRHFLCYNMLGSITTIENEGY 1754
KE+L++GN+ L+S S + KMQEAFQPG+TP+Q GKR FLCYNMLGSITTIE++GY
Sbjct: 356 HSHKESLNNGNEGLKSTT-SARLKMQEAFQPGATPVQPGKRRFLCYNMLGSITTIEHDGY 414
Query: 1753 SHIEVDFHDTGRGPRVPSMTDYFGFTMASLNESGSVFANPCKGEKNMSTLMYRPFSSWAN 1574
SHIE +FHDTG GPRVP+MTDYFGFTMASLNE GSVFANPCKGEKNMSTLMYRPFS+WAN
Sbjct: 415 SHIEANFHDTGSGPRVPAMTDYFGFTMASLNEHGSVFANPCKGEKNMSTLMYRPFSTWAN 474
Query: 1573 NSEWSMRFEAEEVKVVALGAGWIAAATSLNFLRIFTEGGLQRHVLSLDGPVVTAAGFKDE 1394
NSEWSMRFE EEVKVVALG+ W+AA TSLNFLRIFT+GGLQR+V+SLDGPVVTA+GFKDE
Sbjct: 475 NSEWSMRFEQEEVKVVALGSAWVAAVTSLNFLRIFTDGGLQRYVISLDGPVVTASGFKDE 534
Query: 1393 LAVVTHASHFLPSNDQMLEFRVLNISNGTQPLRGHLPLTPGSCLSWFGFTEEGQLSSYDS 1214
LAVVTHASH LPSNDQML+FRV NISNGTQPL+GH+PLTPGSCL+WFGF+EEGQLSSYDS
Sbjct: 535 LAVVTHASHCLPSNDQMLKFRVFNISNGTQPLKGHVPLTPGSCLTWFGFSEEGQLSSYDS 594
Query: 1213 EGTLRVFTNQFGGSWIPLFSASKEKKSDESYWMVGLNASKVFCIVCKTPDLYPPVMPKPV 1034
+G LRVFTNQFGGSW+PLFSASKE KS+E+YW+ GLN +K+FCIVCK+PDL+PPVMPKPV
Sbjct: 595 KGVLRVFTNQFGGSWLPLFSASKE-KSEENYWVAGLNMNKLFCIVCKSPDLFPPVMPKPV 653
Query: 1033 LTLLGLSIPLASSDLGADDLEKEFILSNLNLTQAEKKIEELAAAGLDTSSQDKEAFDLEF 854
LTLL LS PLA+SDLGA+ LE EFIL N++L Q +++IEE+AAAGLDT+S D EAF++E
Sbjct: 654 LTLLDLSFPLATSDLGAETLENEFILKNMHLLQIQQRIEEMAAAGLDTTSLDDEAFNVET 713
Query: 853 SLDKCILRLIAACCNGDKLVRAIELVRLLSSEKSVKTAINLVSKLKLPVLAERFSGILEE 674
+LD+CILRLIA+CCNGDK+VRA ELV+LLS EKSVK AI LV+ LKLP LAERF+ ILEE
Sbjct: 714 ALDRCILRLIASCCNGDKIVRATELVKLLSLEKSVKGAIKLVTALKLPNLAERFNSILEE 773
Query: 673 RLLKETV-GAAVPFLLSNEALAHSAEVNKLEWV----QTKVPEAEIALPPPKFSSTQLLX 509
RLL ET A +P SN + + +V +++ +K + I LP P+ SS
Sbjct: 774 RLLNETSRPATLPLTSSNHDASTTPDVVMSKFLTSIQSSKPSQPVIPLPSPQLSSP---- 829
Query: 508 XXXXXXXXXXXXXXXSNITRVEGNMKDQANC--EKLHLPANTIPKXXXXXXXXXXXXLTK 335
+ +G +++ A EK+ I + +
Sbjct: 830 -----------------LFAKKGKLQEGAKVGNEKVEQRRTAIVENIGKVKSLAEVKSIE 872
Query: 334 TDSNDGASETQTI-------RPSNPFAKALSNQ-TSSVFDSIKKMK 221
+N G + I RPSNPFAK+ SNQ SS+FD+IKKMK
Sbjct: 873 DVTNQGEASIGEIKNGAVNQRPSNPFAKSSSNQEKSSLFDAIKKMK 918
>ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like [Cucumis
sativus] gi|449477125|ref|XP_004154937.1| PREDICTED: WD
repeat and HMG-box DNA-binding protein 1-like [Cucumis
sativus]
Length = 962
Score = 663 bits (1710), Expect = 0.0
Identities = 326/480 (67%), Positives = 391/480 (81%), Gaps = 1/480 (0%)
Frame = -3
Query: 2086 NLSDADEDSFGESELVSRKRLRKQSEYDNMLDE-DSDDQLMLPXXXXXXXXXXXXKETLD 1910
N SD EDS+ ESE+ +RKRLRK S D +LDE DS+D + P ++ LD
Sbjct: 348 NSSDLGEDSYHESEIPTRKRLRKHSTNDEILDEVDSEDFSLFPKLDSRKTSHRVKRDKLD 407
Query: 1909 DGNDKLQSLVKSGKPKMQEAFQPGSTPIQTGKRHFLCYNMLGSITTIENEGYSHIEVDFH 1730
+ ++ + K QEAFQPG+TP+Q GK+ FLCYNMLGSITT E++GYSHIE+DFH
Sbjct: 408 NVDEGAIGKATYSRVKQQEAFQPGATPLQPGKKRFLCYNMLGSITTFEHDGYSHIEIDFH 467
Query: 1729 DTGRGPRVPSMTDYFGFTMASLNESGSVFANPCKGEKNMSTLMYRPFSSWANNSEWSMRF 1550
DTG GPRVPSM D+FGFTMA+L+E+GSVFANPCKGEKNMSTLMYRPF SWANNSEWSMRF
Sbjct: 468 DTGSGPRVPSMNDHFGFTMAALDENGSVFANPCKGEKNMSTLMYRPFGSWANNSEWSMRF 527
Query: 1549 EAEEVKVVALGAGWIAAATSLNFLRIFTEGGLQRHVLSLDGPVVTAAGFKDELAVVTHAS 1370
+ EEVKVVA+G+ W+AA TSL++LR+FT+GGLQ+H+LSLDGPVVTA+GFKDELA VTH+S
Sbjct: 528 DGEEVKVVAIGSRWVAAFTSLSYLRVFTDGGLQKHILSLDGPVVTASGFKDELAFVTHSS 587
Query: 1369 HFLPSNDQMLEFRVLNISNGTQPLRGHLPLTPGSCLSWFGFTEEGQLSSYDSEGTLRVFT 1190
LPSNDQ+LEFR+LNISNGTQ LRG LPLTPGS L+WFGF+EEG+LSSYDS+G LRVFT
Sbjct: 588 TCLPSNDQVLEFRILNISNGTQLLRGRLPLTPGSYLTWFGFSEEGKLSSYDSKGVLRVFT 647
Query: 1189 NQFGGSWIPLFSASKEKKSDESYWMVGLNASKVFCIVCKTPDLYPPVMPKPVLTLLGLSI 1010
NQ+GGSW+PLFSASKE+KSDE+YW+ GLNA+K+FC++CK PD YP V PKPVLTLL LS
Sbjct: 648 NQYGGSWVPLFSASKERKSDENYWVAGLNANKLFCVICKNPDSYPQVTPKPVLTLLNLSF 707
Query: 1009 PLASSDLGADDLEKEFILSNLNLTQAEKKIEELAAAGLDTSSQDKEAFDLEFSLDKCILR 830
PLA SDLGA+ LE EF+++++ L Q +EE+A GL + D EAF +E + D+CILR
Sbjct: 708 PLALSDLGAEALENEFMMNDMYLKQIHGTMEEMALRGLYDTELDDEAFSIEAAQDRCILR 767
Query: 829 LIAACCNGDKLVRAIELVRLLSSEKSVKTAINLVSKLKLPVLAERFSGILEERLLKETVG 650
LIA+CCNGDKLVRA ELV+LLS EKSVK AI LV+ LKLP LAERF+ ILEERLL ET G
Sbjct: 768 LIASCCNGDKLVRATELVKLLSLEKSVKGAIKLVTALKLPNLAERFNAILEERLLNETKG 827
>ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like [Glycine
max]
Length = 994
Score = 639 bits (1649), Expect = e-180
Identities = 335/536 (62%), Positives = 404/536 (75%), Gaps = 5/536 (0%)
Frame = -3
Query: 2104 EHGNLGNLSDADEDSFGESELVSRKRLRKQSEYDNMLDEDSDDQLM-LPXXXXXXXXXXX 1928
E+ GNLSD +S ESE SRKR RK S + L ED ++++
Sbjct: 339 ENSASGNLSDIGGNSNEESEPPSRKRSRKHSLSEENLGEDGGEEIVSYLKVDTHKKRNRS 398
Query: 1927 XKETLDDGNDKLQSLVKSGKPKMQEAFQPGSTPIQTGKRHFLCYNMLGSITTIENEGYSH 1748
KE LD GN +S + + K KMQEAFQPGSTP+Q GKRHFLCYNMLG IT+IE++GYSH
Sbjct: 399 GKENLDSGNMGFRSTMVTSKAKMQEAFQPGSTPVQPGKRHFLCYNMLGCITSIEHDGYSH 458
Query: 1747 IEVDFHDTGRGPRVPSMTDYFGFTMASLNESGSVFANPCKGEKNMSTLMYRPFSSWANNS 1568
IE+DFHDTG PRVPSMTD+FGFTMA+LNESGSVFANPCKGEKNMSTLMYRPFSSWANNS
Sbjct: 459 IEIDFHDTGSTPRVPSMTDHFGFTMAALNESGSVFANPCKGEKNMSTLMYRPFSSWANNS 518
Query: 1567 EWSMRFEAEEVKVVALGAGWIAAATSLNFLRIFTEGGLQRHVLSLDGPVVTAAGFKDELA 1388
EWSMRFE EEVKVVALG+ W+AA TS N+LRIF+EGG+QR V SLDGPVVTA+GFKD+LA
Sbjct: 519 EWSMRFEGEEVKVVALGSAWVAAVTSFNYLRIFSEGGMQRDVFSLDGPVVTASGFKDKLA 578
Query: 1387 VVTHASHFLPSNDQMLEFRVLNISNGTQPLRGHLPLTPGSCLSWFGFTEEGQLSSYDSEG 1208
VVTHA+ LPSNDQMLEF NI GTQ L+G LPL+PGS LSWFGF+EEGQL SYDS+G
Sbjct: 579 VVTHATDGLPSNDQMLEFMAFNIPRGTQLLQGRLPLSPGSSLSWFGFSEEGQLCSYDSKG 638
Query: 1207 TLRVFTNQFGGSWIPLFSASKEKKSDESYWMVGLNASKVFCIVCKTPDLYPPVMPKPVLT 1028
LR +T++FGG WIPLFSA+KE KSDE+YW+ GLNASKVFC+VCK P+ +P VMPKPVLT
Sbjct: 639 VLRSYTSKFGGRWIPLFSATKE-KSDENYWVTGLNASKVFCVVCKKPEGFPQVMPKPVLT 697
Query: 1027 LLGLSIPLASSDL-GADDLEKEFILSNLNLTQAEKKIEELAAAGLDTSSQDKEAFDLEFS 851
L LS PLASSDL G++ EKEF++++L+L + ++ ++E+ + GLDT+S D +AF+LE +
Sbjct: 698 PLSLSFPLASSDLGGSESHEKEFMMNSLHLYEIQRTMDEMDSVGLDTTSLDDDAFNLEAA 757
Query: 850 LDKCILRLIAACCNGDKLVRAIELVRLLSSEKSVKTAINLVSKLKLPVLAERFSGILEER 671
DKCILRLIAACCN DKLVRA ELV+LL+ EKS++ AI LV+ +KLP LAERFS ILEER
Sbjct: 758 QDKCILRLIAACCNSDKLVRATELVKLLTLEKSMRGAIKLVTAMKLPNLAERFSCILEER 817
Query: 670 LLKETVGAAVPFLLSNEALAHSAEV---NKLEWVQTKVPEAEIALPPPKFSSTQLL 512
LL+E A + N +A+ T+ A PK S+T +
Sbjct: 818 LLEEAKKAMETNIKENSVAPVTADAIPGRSKAPTHTETLNAVTMSSSPKLSATSFV 873
>gb|EEC84140.1| hypothetical protein OsI_30493 [Oryza sativa Indica Group]
Length = 1019
Score = 626 bits (1614), Expect = e-176
Identities = 359/668 (53%), Positives = 440/668 (65%), Gaps = 42/668 (6%)
Frame = -3
Query: 2089 GNLSDADED--SFGESELVSRKRLRKQSEYDNMLDEDSDDQ---LMLPXXXXXXXXXXXX 1925
G L D D+D S GE + KRLR++S Y + + DS+D+ L +
Sbjct: 356 GGLDDDDDDDESLGELGPFNHKRLRRKSTYHDHSNGDSEDEDLILQMESRKRMKDTHRDN 415
Query: 1924 KETLDDGNDKLQSLVKSGKPKMQEAFQPGSTPIQTGKRHFLCYNMLGSITTIENEGYSHI 1745
KE D + V+ +MQ AFQPGSTP Q GKR+FL YNMLGSITTIENEG+SH+
Sbjct: 416 KEVADKAIGDSATSVRLVTARMQTAFQPGSTPPQPGKRNFLAYNMLGSITTIENEGHSHV 475
Query: 1744 EVDFHDTGRGPRVPSMTDYFGFTMASLNESGSVFANPCKGEKNMSTLMYRPFSSWANNSE 1565
EVDFHDTGRGPRVPSMTDYFGFTMA+LNESGSVFANPCKG+KNMSTLMYRPFSSWA NSE
Sbjct: 476 EVDFHDTGRGPRVPSMTDYFGFTMAALNESGSVFANPCKGDKNMSTLMYRPFSSWAGNSE 535
Query: 1564 WSMRFEAEEVKVVALGAGWIAAATSLNFLRIFTEGGLQRHVLSLDGPVVTAAGFKDELAV 1385
WSMRFE EEVK VA+G GW+AA T+LNFLRIFTEGGLQ H+LS+ GPVVTAAG D+LA+
Sbjct: 536 WSMRFEGEEVKAVAVGVGWVAAVTTLNFLRIFTEGGLQMHILSVGGPVVTAAGHGDQLAI 595
Query: 1384 VTHASHFLPSNDQMLEFRVLNISNGTQPLRGHLPLTPGSCLSWFGFTEEGQLSSYDSEGT 1205
V+HAS L S DQ+L+ +VL IS Q L L LTP S LSWFGF+E G+LSS+DS+G
Sbjct: 596 VSHASDCLSSGDQVLDVKVLKISECAQSLSSRLVLTPASKLSWFGFSENGELSSFDSKGI 655
Query: 1204 LRVFTNQFGGSWIPLFSASKEKKS-DESYWMVGLNASKVFCIVCKTPDLYPPVMPKPVLT 1028
LRVF+ QFGGSWIP+FS+ K +KS DES+W+VGL+A+ +FCI+CK+P+ YP VMPKPVLT
Sbjct: 656 LRVFSGQFGGSWIPIFSSIKARKSEDESHWVVGLDANNIFCILCKSPESYPQVMPKPVLT 715
Query: 1027 LLGLSIPLASSDLGADDLEKEFILSNLNLTQAEKKIEELAAAGLDTSSQDKEAFDLEFSL 848
+L LS PLASSDLGA+ LE EF++ L+L+Q +KKIEE+AA GLDT + D EAF++E +L
Sbjct: 716 ILELSFPLASSDLGANSLETEFMMRKLHLSQIQKKIEEMAALGLDTIALDDEAFNMEAAL 775
Query: 847 DKCILRLIAACCNGDKLVRAIELVRLLSSEKSVKTAINLVSKLKLPVLAERFSGILEERL 668
D+CILRLI++CCNGDKLVRA EL +LL+ EKS+K A+ LV++LKLP+L ERFS ILEE +
Sbjct: 776 DRCILRLISSCCNGDKLVRATELAKLLTLEKSMKGALMLVTRLKLPILQERFSAILEEMM 835
Query: 667 LKETVGAAVPFLLSNEALAHSAEVNKLEWVQTKVPEAEIALPPPKF----SSTQLLXXXX 500
L A + SN +S + T+ A+PP K +S +L
Sbjct: 836 LNNAKIANTSGVFSNSNTNYSPS----PALSTQ------AVPPAKVVQNGNSLKLPTLPK 885
Query: 499 XXXXXXXXXXXXSNITRVE--GNMKD-QANCEKLHLPANTIPKXXXXXXXXXXXXLTKTD 329
SN VE N+K+ P IPK TK D
Sbjct: 886 LNPAAQRSNPTESNKAEVEQADNLKEISTKVSPAQTPLVKIPK------NSEMGVKTKKD 939
Query: 328 SNDGASETQTI---------------------------RPSNPFAKALSN--QTSSVFDS 236
NDGAS T+ RP NPFAK+ S+ Q SS+FDS
Sbjct: 940 -NDGASHATTVDQNPKGGSGQVGLKNKSVDSCNGVQPQRPVNPFAKSSSSKEQPSSLFDS 998
Query: 235 IKKMKAKN 212
IKKMK +N
Sbjct: 999 IKKMKVEN 1006