BLASTX nr result

ID: Coptis25_contig00011335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011335
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270507.1| PREDICTED: uncharacterized protein LOC100261...   119   1e-24
ref|XP_003550346.1| PREDICTED: uncharacterized protein LOC100818...   104   2e-20
ref|XP_003529560.1| PREDICTED: uncharacterized protein LOC100776...   104   2e-20
ref|XP_002328600.1| predicted protein [Populus trichocarpa] gi|2...   102   1e-19
ref|XP_002516949.1| conserved hypothetical protein [Ricinus comm...   102   2e-19

>ref|XP_002270507.1| PREDICTED: uncharacterized protein LOC100261891 [Vitis vinifera]
           gi|296083344|emb|CBI22980.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score =  119 bits (297), Expect = 1e-24
 Identities = 64/116 (55%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
 Frame = +3

Query: 186 MVGLSDLLEARQNFNK-SPQVINKITMI-KPHLXXXXXXXXXXXXXXXXXXXAISFLDEC 359
           MVGLS +LEA++  NK +PQVINKITM+ KP                     A +FLDEC
Sbjct: 1   MVGLSIVLEAQKGINKKTPQVINKITMMTKP--TPFPSPPARWNSHSPLLPAATTFLDEC 58

Query: 360 FLCKQRLFPGNDIFMYNGDRAFCSMECRYRQILMDEEENVKREKCCFVATRPNSSS 527
           FLCKQ+L PG DI+MY GDRAFCS+ECR RQI MDEEE V+R+ C   A +P S+S
Sbjct: 59  FLCKQKLLPGKDIYMYKGDRAFCSVECRCRQIFMDEEETVRRDNCSLAAMKPTSAS 114


>ref|XP_003550346.1| PREDICTED: uncharacterized protein LOC100818870 [Glycine max]
          Length = 133

 Score =  104 bits (260), Expect = 2e-20
 Identities = 56/116 (48%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
 Frame = +3

Query: 186 MVGLSDLLEARQNF--NKSPQVINKITMIKPHLXXXXXXXXXXXXXXXXXXXAISFLDEC 359
           MVGLS +LEA+++    K+PQVINK TM+                         +FLD+C
Sbjct: 1   MVGLSVVLEAQKSCINKKTPQVINKTTMLM-----LSSIHNKPSPQPSSLFQPPTFLDQC 55

Query: 360 FLCKQRLFPGNDIFMYNGDRAFCSMECRYRQILMDEEENVKREKCCFVATRPNSSS 527
           FLC +RL PG DI+MY GDRAFCS++CR +QI  DEEE +++EKC   A RP SSS
Sbjct: 56  FLCGKRLLPGKDIYMYKGDRAFCSVDCRCKQIFSDEEEAIQKEKCSLAAMRPTSSS 111


>ref|XP_003529560.1| PREDICTED: uncharacterized protein LOC100776779 [Glycine max]
          Length = 135

 Score =  104 bits (260), Expect = 2e-20
 Identities = 56/116 (48%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
 Frame = +3

Query: 186 MVGLSDLLEARQNF--NKSPQVINKITMIKPHLXXXXXXXXXXXXXXXXXXXAISFLDEC 359
           MVGLS +LEA+++    K+PQVINK +M+   L                     +FLD+C
Sbjct: 1   MVGLSVVLEAQKSCINKKTPQVINKTSMM---LSSIHNKPSPPLPQPSSLFQPPTFLDQC 57

Query: 360 FLCKQRLFPGNDIFMYNGDRAFCSMECRYRQILMDEEENVKREKCCFVATRPNSSS 527
           FLC +RL PG DI+MY GDRAFCS++CR +QI  DEEE +++EKC   A RP SSS
Sbjct: 58  FLCGKRLLPGKDIYMYKGDRAFCSVDCRCKQIFTDEEEAIQKEKCSLAAMRPTSSS 113


>ref|XP_002328600.1| predicted protein [Populus trichocarpa] gi|222838582|gb|EEE76947.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  102 bits (254), Expect = 1e-19
 Identities = 55/125 (44%), Positives = 74/125 (59%), Gaps = 11/125 (8%)
 Frame = +3

Query: 186 MVGLSDLLEARQNFN---KSPQVINKITMIKPHLXXXXXXXXXXXXXXXXXXXAI----- 341
           MVGLS +LEA+++ +   K+PQVINK TM+   +                   +      
Sbjct: 1   MVGLSIVLEAQKSGSVNSKTPQVINKATMMMMMISNKPSSGPPSFSSATAPLPSYRNCSF 60

Query: 342 ---SFLDECFLCKQRLFPGNDIFMYNGDRAFCSMECRYRQILMDEEENVKREKCCFVATR 512
              +FL +CFLC Q+L PG DI+MY GDRAFCS+ECR RQI MDEEE +++E C F A +
Sbjct: 61  PVPAFLQQCFLCGQKLLPGKDIYMYKGDRAFCSVECRCRQIFMDEEETIRKENCSFSAMK 120

Query: 513 PNSSS 527
           P  S+
Sbjct: 121 PTGSA 125


>ref|XP_002516949.1| conserved hypothetical protein [Ricinus communis]
           gi|223544037|gb|EEF45563.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 152

 Score =  102 bits (253), Expect = 2e-19
 Identities = 57/124 (45%), Positives = 71/124 (57%), Gaps = 10/124 (8%)
 Frame = +3

Query: 186 MVGLSDLLEARQ---------NFNKSPQVINKITMIKPHLXXXXXXXXXXXXXXXXXXXA 338
           MVGLS LLEA+Q         N  K+PQVINK T+    +                    
Sbjct: 1   MVGLSILLEAQQKQQVGFANNNKKKTPQVINKATLNMMMINKLPSPLPSSTSLSSLSSFK 60

Query: 339 I-SFLDECFLCKQRLFPGNDIFMYNGDRAFCSMECRYRQILMDEEENVKREKCCFVATRP 515
             +FL+ CFLC Q+L PG DI+MY GDRAFCS+ECR RQI  DEEE +++E C F A +P
Sbjct: 61  PPTFLEHCFLCGQKLLPGKDIYMYKGDRAFCSVECRCRQIFTDEEETLRKENCSFAAMKP 120

Query: 516 NSSS 527
            S+S
Sbjct: 121 TSTS 124


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