BLASTX nr result
ID: Coptis25_contig00011331
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00011331 (1267 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI16383.3| unnamed protein product [Vitis vinifera] 642 0.0 ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnm... 642 0.0 ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm... 632 e-179 ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-m... 607 e-171 ref|XP_002298404.1| predicted protein [Populus trichocarpa] gi|2... 601 e-169 >emb|CBI16383.3| unnamed protein product [Vitis vinifera] Length = 544 Score = 642 bits (1656), Expect = 0.0 Identities = 307/419 (73%), Positives = 356/419 (84%), Gaps = 7/419 (1%) Frame = +2 Query: 2 ENFWAACPWDEDLKYAEAVCDQIGVPLEVVHLTEEYWSNVVSYIIEEYRCGRTPNPDVLC 181 ENFW+ CPW++DLKYA+AVCDQ+ VPLEVVHLT+EYW NVVSYIIEEYRCGRTPNPDVLC Sbjct: 128 ENFWSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLC 187 Query: 182 NTRIKFGAFMNAISSMEFDYVASGHYARVVHSSSEQDGDASVLELSNDTVKDQTYFLSHL 361 NTRIKFGAFM+AISS EFDYVASGHYA VVHS ++Q SVLELS D VKDQTYFLSHL Sbjct: 188 NTRIKFGAFMDAISSKEFDYVASGHYANVVHSFTDQMDKPSVLELSKDMVKDQTYFLSHL 247 Query: 362 SQDQLKRLLFPLGRISKDEVRRLATNFDLPNKERKDSQGICFLGKIKFSDFVARHIGELE 541 SQ QLKRL+FPLG I KDEVR LAT DLPN++RKDSQGICFLGKIKFS+FVARHIGE E Sbjct: 248 SQIQLKRLIFPLGCIPKDEVRSLATKLDLPNRDRKDSQGICFLGKIKFSEFVARHIGEKE 307 Query: 542 GVLLEAESGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDIQNNVVFVSRNYYSLDKR 721 G++LEAE+GD LGKHRGFWFYTIGQRQGLRLPGGPWYVVEKD++NNVVFVSRNY+SLDKR Sbjct: 308 GIILEAETGDLLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSLDKR 367 Query: 722 RRKFRIGSLKWLSGSPPDHFDQLHCKVRHGPSFYPCTLTMEPVDDGKKDVGLVQLFEDDQ 901 RR FR+GSLKW+S PP +QL CKVRHGP FY C+ TMEP +DG +DV +VQL EDDQ Sbjct: 368 RRLFRVGSLKWISREPPGQINQLQCKVRHGPGFYNCSFTMEPGEDGHEDVAVVQLSEDDQ 427 Query: 902 GLAAGQFAAFYRDKNCLGSGIILESWEDQGFPVCTRALEIARLEDKSKLGKPVKIMVQPE 1081 GLAAGQF AFY+ ++C+GSG+ILESW+DQGFPVC +ALEIAR+EDKSKLGKPVKI V+PE Sbjct: 428 GLAAGQFTAFYQGRSCIGSGVILESWDDQGFPVCAKALEIARMEDKSKLGKPVKIKVRPE 487 Query: 1082 --PKGN-----IQLHKEAAMAKITPSEPVIETPRPASQGIFSSCFPMNWLKELRNKWLR 1237 PKG+ I+L +E A ++ ++ + +S+G S FPMNWL+++R KWL+ Sbjct: 488 TPPKGSDQIDGIKLDRELANSQAAVTDEISR----SSEGEARSRFPMNWLQKIREKWLQ 542 >ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Vitis vinifera] Length = 540 Score = 642 bits (1656), Expect = 0.0 Identities = 307/419 (73%), Positives = 356/419 (84%), Gaps = 7/419 (1%) Frame = +2 Query: 2 ENFWAACPWDEDLKYAEAVCDQIGVPLEVVHLTEEYWSNVVSYIIEEYRCGRTPNPDVLC 181 ENFW+ CPW++DLKYA+AVCDQ+ VPLEVVHLT+EYW NVVSYIIEEYRCGRTPNPDVLC Sbjct: 124 ENFWSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLC 183 Query: 182 NTRIKFGAFMNAISSMEFDYVASGHYARVVHSSSEQDGDASVLELSNDTVKDQTYFLSHL 361 NTRIKFGAFM+AISS EFDYVASGHYA VVHS ++Q SVLELS D VKDQTYFLSHL Sbjct: 184 NTRIKFGAFMDAISSKEFDYVASGHYANVVHSFTDQMDKPSVLELSKDMVKDQTYFLSHL 243 Query: 362 SQDQLKRLLFPLGRISKDEVRRLATNFDLPNKERKDSQGICFLGKIKFSDFVARHIGELE 541 SQ QLKRL+FPLG I KDEVR LAT DLPN++RKDSQGICFLGKIKFS+FVARHIGE E Sbjct: 244 SQIQLKRLIFPLGCIPKDEVRSLATKLDLPNRDRKDSQGICFLGKIKFSEFVARHIGEKE 303 Query: 542 GVLLEAESGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDIQNNVVFVSRNYYSLDKR 721 G++LEAE+GD LGKHRGFWFYTIGQRQGLRLPGGPWYVVEKD++NNVVFVSRNY+SLDKR Sbjct: 304 GIILEAETGDLLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSLDKR 363 Query: 722 RRKFRIGSLKWLSGSPPDHFDQLHCKVRHGPSFYPCTLTMEPVDDGKKDVGLVQLFEDDQ 901 RR FR+GSLKW+S PP +QL CKVRHGP FY C+ TMEP +DG +DV +VQL EDDQ Sbjct: 364 RRLFRVGSLKWISREPPGQINQLQCKVRHGPGFYNCSFTMEPGEDGHEDVAVVQLSEDDQ 423 Query: 902 GLAAGQFAAFYRDKNCLGSGIILESWEDQGFPVCTRALEIARLEDKSKLGKPVKIMVQPE 1081 GLAAGQF AFY+ ++C+GSG+ILESW+DQGFPVC +ALEIAR+EDKSKLGKPVKI V+PE Sbjct: 424 GLAAGQFTAFYQGRSCIGSGVILESWDDQGFPVCAKALEIARMEDKSKLGKPVKIKVRPE 483 Query: 1082 --PKGN-----IQLHKEAAMAKITPSEPVIETPRPASQGIFSSCFPMNWLKELRNKWLR 1237 PKG+ I+L +E A ++ ++ + +S+G S FPMNWL+++R KWL+ Sbjct: 484 TPPKGSDQIDGIKLDRELANSQAAVTDEISR----SSEGEARSRFPMNWLQKIREKWLQ 538 >ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cucumis sativus] gi|449524848|ref|XP_004169433.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cucumis sativus] Length = 538 Score = 632 bits (1631), Expect = e-179 Identities = 306/421 (72%), Positives = 349/421 (82%), Gaps = 7/421 (1%) Frame = +2 Query: 2 ENFWAACPWDEDLKYAEAVCDQIGVPLEVVHLTEEYWSNVVSYIIEEYRCGRTPNPDVLC 181 ENFW+ CPWD+DLKYA+AVCDQ+ VPLEVVHLTEEYW NVVSYIIEEYRCGRTPNPDVLC Sbjct: 122 ENFWSECPWDDDLKYAKAVCDQVDVPLEVVHLTEEYWRNVVSYIIEEYRCGRTPNPDVLC 181 Query: 182 NTRIKFGAFMNAISSMEFDYVASGHYARVVHSSSEQDGDASVLELSNDTVKDQTYFLSHL 361 NTRIKFGAFM+AIS+MEFDYVASGHYA V+H S++Q SVLELS D VKDQTYFLSHL Sbjct: 182 NTRIKFGAFMDAISNMEFDYVASGHYANVIHPSADQMDKPSVLELSKDMVKDQTYFLSHL 241 Query: 362 SQDQLKRLLFPLGRISKDEVRRLATNFDLPNKERKDSQGICFLGKIKFSDFVARHIGELE 541 SQ+QLKRLLFPLG I KDEVR+LA F+LPNK+RKDSQGICFLGKIKFS+FVARHIGE E Sbjct: 242 SQNQLKRLLFPLGCIPKDEVRKLAAKFNLPNKDRKDSQGICFLGKIKFSEFVARHIGEDE 301 Query: 542 GVLLEAESGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDIQNNVVFVSRNYYSLDKR 721 GV+LEAESGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDI+NNVVFVSRNY+S DKR Sbjct: 302 GVILEAESGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDIKNNVVFVSRNYFSFDKR 361 Query: 722 RRKFRIGSLKWLSGSPPDHFDQLHCKVRHGPSFYPCTLTMEPVDDGKKDVGLVQLFEDDQ 901 RR FR+GSLKWLSG PPD F +L CKVRHGPSFY C LTME +DG +DV +V L EDDQ Sbjct: 362 RRVFRVGSLKWLSGFPPDQFTELQCKVRHGPSFYSCNLTMEHSEDGHEDVAVVHLSEDDQ 421 Query: 902 GLAAGQFAAFYRDKNCLGSGIILESWEDQGFPVCTRALEIARLEDKSKLGKPVKIMVQPE 1081 GLAAGQFAAFY+ ++C+GSG+ILESW+DQGFPVC +A+E A++EDKSKLGKP+KI V+PE Sbjct: 422 GLAAGQFAAFYKGRSCIGSGVILESWDDQGFPVCQKAIENAQMEDKSKLGKPIKIKVKPE 481 Query: 1082 -------PKGNIQLHKEAAMAKITPSEPVIETPRPASQGIFSSCFPMNWLKELRNKWLRT 1240 K + ++H + + T V+E R S + M WL L+ K L+ Sbjct: 482 SGMKESKAKDDTEIHDKLRNEEAT----VVEQIREVSPDEAMATPSMKWLGSLKKKLLQI 537 Query: 1241 F 1243 F Sbjct: 538 F 538 >ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative [Ricinus communis] gi|223547418|gb|EEF48913.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative [Ricinus communis] Length = 497 Score = 607 bits (1565), Expect = e-171 Identities = 278/360 (77%), Positives = 323/360 (89%) Frame = +2 Query: 2 ENFWAACPWDEDLKYAEAVCDQIGVPLEVVHLTEEYWSNVVSYIIEEYRCGRTPNPDVLC 181 ENFW+ CPW+EDLKYA+AVCDQ+ +PLEVVHLT+EYW NVVSYIIEEYRCGRTPNPDVLC Sbjct: 111 ENFWSECPWEEDLKYAKAVCDQVDIPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLC 170 Query: 182 NTRIKFGAFMNAISSMEFDYVASGHYARVVHSSSEQDGDASVLELSNDTVKDQTYFLSHL 361 NTRIKFGAFM+AI++MEFDYVASGHYA+V+H S+++ SVLELS D VKDQTYFLSHL Sbjct: 171 NTRIKFGAFMDAINNMEFDYVASGHYAKVIHPSADEINQPSVLELSKDMVKDQTYFLSHL 230 Query: 362 SQDQLKRLLFPLGRISKDEVRRLATNFDLPNKERKDSQGICFLGKIKFSDFVARHIGELE 541 SQ QL+RL+FPLG ISKDEVR+LAT F+LPNK+RKDSQGICFLGKIKFS+FVARHIGE+E Sbjct: 231 SQAQLRRLIFPLGGISKDEVRKLATLFNLPNKDRKDSQGICFLGKIKFSEFVARHIGEME 290 Query: 542 GVLLEAESGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDIQNNVVFVSRNYYSLDKR 721 G++LEAE+GDFLG HRGFWFYTIGQRQGLRLPGGPWYVVEKD++NNVVFVSRNY+S DKR Sbjct: 291 GIMLEAETGDFLGNHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSFDKR 350 Query: 722 RRKFRIGSLKWLSGSPPDHFDQLHCKVRHGPSFYPCTLTMEPVDDGKKDVGLVQLFEDDQ 901 RR R+GSL+W +GSPP +L CKVRHGP FY C++ +EP + +DV +VQL EDDQ Sbjct: 351 RRLLRVGSLRWFNGSPPKETSELQCKVRHGPGFYNCSVVIEPGEVDDQDVAIVQLCEDDQ 410 Query: 902 GLAAGQFAAFYRDKNCLGSGIILESWEDQGFPVCTRALEIARLEDKSKLGKPVKIMVQPE 1081 GLAAGQFAAFY+ + C+GSG+ILESW DQGFPVC RALE+AR+EDKS+LGKPVKI V+PE Sbjct: 411 GLAAGQFAAFYKGRTCIGSGVILESWNDQGFPVCERALELARIEDKSELGKPVKIKVKPE 470 >ref|XP_002298404.1| predicted protein [Populus trichocarpa] gi|222845662|gb|EEE83209.1| predicted protein [Populus trichocarpa] Length = 434 Score = 601 bits (1550), Expect = e-169 Identities = 287/391 (73%), Positives = 331/391 (84%) Frame = +2 Query: 5 NFWAACPWDEDLKYAEAVCDQIGVPLEVVHLTEEYWSNVVSYIIEEYRCGRTPNPDVLCN 184 NFW+ CPW+EDLK+A+ VCDQ+GVPLEVVHLT+EYWSNVVSYIIEEYRCGRTPNPDVLCN Sbjct: 49 NFWSECPWEEDLKFAKGVCDQVGVPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDVLCN 108 Query: 185 TRIKFGAFMNAISSMEFDYVASGHYARVVHSSSEQDGDASVLELSNDTVKDQTYFLSHLS 364 TRIKFGAFM+AI++MEFDYVASGHYA V+H S+Q SVLELS D +KDQTYFLSHL+ Sbjct: 109 TRIKFGAFMDAINNMEFDYVASGHYAHVIHPVSDQINKPSVLELSKDKLKDQTYFLSHLT 168 Query: 365 QDQLKRLLFPLGRISKDEVRRLATNFDLPNKERKDSQGICFLGKIKFSDFVARHIGELEG 544 Q QLKRL+FPLG I K+EVR LA+ FDLPNK+RKDSQGICFLGKIKFS+FV RHIGE EG Sbjct: 169 QAQLKRLIFPLGCIPKEEVRNLASKFDLPNKDRKDSQGICFLGKIKFSEFVGRHIGESEG 228 Query: 545 VLLEAESGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDIQNNVVFVSRNYYSLDKRR 724 V+LEAE+GDFLG HRGFWFYTIGQRQGLRLPGGPWYVVEKD++NNVVFVSRNY+SLDKRR Sbjct: 229 VILEAETGDFLGIHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSLDKRR 288 Query: 725 RKFRIGSLKWLSGSPPDHFDQLHCKVRHGPSFYPCTLTMEPVDDGKKDVGLVQLFEDDQG 904 R FR+GSLKWLSGSP D QL CKVRHGP+FY C++ +E +D ++V V L EDDQG Sbjct: 289 RSFRVGSLKWLSGSPTDMTTQLQCKVRHGPTFYDCSVKIELGEDSPEEVVAVHLCEDDQG 348 Query: 905 LAAGQFAAFYRDKNCLGSGIILESWEDQGFPVCTRALEIARLEDKSKLGKPVKIMVQPEP 1084 LAAGQF AFY+ + C+GSG+ILESW+D+GFPVC +ALE+ARLEDKSKLGKPVKI V+PE Sbjct: 349 LAAGQFTAFYQGRTCIGSGVILESWDDKGFPVCQKALELARLEDKSKLGKPVKIKVKPET 408 Query: 1085 KGNIQLHKEAAMAKITPSEPVIETPRPASQG 1177 + K+ I P + + E PR A G Sbjct: 409 SDQESVQKDG----IEPDKGLAE-PRVAVTG 434