BLASTX nr result

ID: Coptis25_contig00011326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011326
         (1181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265170.2| PREDICTED: uncharacterized protein LOC100246...   389   e-106
gb|ACU19651.1| unknown [Glycine max]                                  378   e-102
gb|ACU18927.1| unknown [Glycine max]                                  378   e-102
ref|XP_003548711.1| PREDICTED: uncharacterized protein LOC100812...   377   e-102
ref|XP_002319148.1| predicted protein [Populus trichocarpa] gi|2...   377   e-102

>ref|XP_002265170.2| PREDICTED: uncharacterized protein LOC100246079 [Vitis vinifera]
            gi|296089289|emb|CBI39061.3| unnamed protein product
            [Vitis vinifera]
          Length = 268

 Score =  389 bits (1000), Expect = e-106
 Identities = 207/266 (77%), Positives = 229/266 (86%), Gaps = 1/266 (0%)
 Frame = -1

Query: 1124 METRTVEVGHVSDLAGEREIREFFSFSGEIEHVEIHSGVGQPKHAFVTFKDAKALEIALL 945
            M+TRTV+VGHVSDLAGEREI EFFSFSG+IEHVEI    GQ + AFVTFKD KALEIALL
Sbjct: 1    MQTRTVQVGHVSDLAGEREIHEFFSFSGDIEHVEILRDSGQLRTAFVTFKDPKALEIALL 60

Query: 944  LSGATIVDQIVSINPVQNYIPKIE-EVREVDNAVSVATGESIGLNVETKNSSPTNGRVYV 768
            LSGATIVDQ+V+I PV+NY+P  E EV   D+AV       +  N E K +SP NGRVYV
Sbjct: 61   LSGATIVDQVVTITPVENYVPTAEREVSITDDAVCQVPDGDVSPNAEGKATSPNNGRVYV 120

Query: 767  SKAQGAVTNILAKGSAIGQDALNKAKAFDEKHQLTANASAKVISFDRRVGLTEKLTVGIS 588
            +KAQ  VT++LAKGSAIGQDA+NKAKAFDEKHQLTA+ASAKVISFDRRVGLTEKLTVGIS
Sbjct: 121  NKAQDVVTSMLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVISFDRRVGLTEKLTVGIS 180

Query: 587  VVNEKVKSVDQRLQVSDKTMAALVAAERKLNDTGSAVKTSRYVTAGTAWLNGAFSKVAKV 408
            VVNEKVKSVDQRL VSDKTMAAL+AAERKLN+TGSAVKTSRYVTAGT WLNGAF+KVAK 
Sbjct: 181  VVNEKVKSVDQRLHVSDKTMAALLAAERKLNNTGSAVKTSRYVTAGTTWLNGAFTKVAKA 240

Query: 407  GQVAGSKTREKFDLAVSNLSATDSRI 330
            GQ+AG+KTREKF LAVSNL+A D  I
Sbjct: 241  GQIAGTKTREKFHLAVSNLTAKDPSI 266


>gb|ACU19651.1| unknown [Glycine max]
          Length = 273

 Score =  378 bits (970), Expect = e-102
 Identities = 200/272 (73%), Positives = 233/272 (85%), Gaps = 5/272 (1%)
 Frame = -1

Query: 1124 METRTVEVGHVSDLAGEREIREFFSFSGEIEHVEIHSGVGQPKHAFVTFKDAKALEIALL 945
            M+TRTV+V   SDLAG REI EFFSFSGEIEHVEI S  G+ K A+VTFKD KALEIALL
Sbjct: 1    MQTRTVQVKQFSDLAGVREIHEFFSFSGEIEHVEILSEDGKSKTAYVTFKDPKALEIALL 60

Query: 944  LSGATIVDQIVSINPVQNYIP--KIEEVREVDNAVSVA---TGESIGLNVETKNSSPTNG 780
            LSGATIVDQ+V I P +NY+P  ++EEVR V+NA++VA     E++ L++E   +SPTN 
Sbjct: 61   LSGATIVDQVVKITPAENYVPNREMEEVRVVENAINVAPSENSENVSLSIEEGKASPTNR 120

Query: 779  RVYVSKAQGAVTNILAKGSAIGQDALNKAKAFDEKHQLTANASAKVISFDRRVGLTEKLT 600
            R+Y+SKAQ AVT++LAKGSAI QDA+NKAKAFDEKHQLTANASAKVIS D+RVGLTEKLT
Sbjct: 121  RIYLSKAQDAVTSMLAKGSAIRQDAVNKAKAFDEKHQLTANASAKVISLDKRVGLTEKLT 180

Query: 599  VGISVVNEKVKSVDQRLQVSDKTMAALVAAERKLNDTGSAVKTSRYVTAGTAWLNGAFSK 420
            VGI+ VN+KVKSVDQRLQVSDKTMAA++AAERK+N+TGSAVKTSRYVTAGTAW NGAFSK
Sbjct: 181  VGIAAVNQKVKSVDQRLQVSDKTMAAIIAAERKINNTGSAVKTSRYVTAGTAWFNGAFSK 240

Query: 419  VAKVGQVAGSKTREKFDLAVSNLSATDSRIAA 324
            VAK G VA +KTREKF LAVSNL+A +  +AA
Sbjct: 241  VAKAGHVASTKTREKFHLAVSNLTAKEPSVAA 272


>gb|ACU18927.1| unknown [Glycine max]
          Length = 276

 Score =  378 bits (970), Expect = e-102
 Identities = 200/271 (73%), Positives = 233/271 (85%), Gaps = 5/271 (1%)
 Frame = -1

Query: 1121 ETRTVEVGHVSDLAGEREIREFFSFSGEIEHVEIHSGVGQPKHAFVTFKDAKALEIALLL 942
            ETRTV+V  +SDLAG REI EFFSFSGEIEHVEI S  G+ K A+VTFKD KALEIALLL
Sbjct: 5    ETRTVQVKQLSDLAGVREIHEFFSFSGEIEHVEILSEDGKSKTAYVTFKDPKALEIALLL 64

Query: 941  SGATIVDQIVSINPVQNYIP--KIEEVREVDNAVSVA---TGESIGLNVETKNSSPTNGR 777
            SGATIVDQ+V I P +NY+P  ++EEVR V+NA++VA     E++ L++E   +SPTN R
Sbjct: 65   SGATIVDQVVKITPAENYVPNREMEEVRVVENAINVAPSENSENVSLSIEEGKASPTNRR 124

Query: 776  VYVSKAQGAVTNILAKGSAIGQDALNKAKAFDEKHQLTANASAKVISFDRRVGLTEKLTV 597
            +Y+SKAQ AVT++LAKGSAI QDA+NKAKAFDEKHQLTANASAKVIS D+RVGLTEKLTV
Sbjct: 125  IYLSKAQDAVTSMLAKGSAIRQDAVNKAKAFDEKHQLTANASAKVISLDKRVGLTEKLTV 184

Query: 596  GISVVNEKVKSVDQRLQVSDKTMAALVAAERKLNDTGSAVKTSRYVTAGTAWLNGAFSKV 417
            GI+ VN+KVKSVDQRLQVSDKTMAA++AAERK+N+TGSAVKTSRYVTAGTAW NGAFSKV
Sbjct: 185  GIAAVNQKVKSVDQRLQVSDKTMAAIIAAERKINNTGSAVKTSRYVTAGTAWFNGAFSKV 244

Query: 416  AKVGQVAGSKTREKFDLAVSNLSATDSRIAA 324
            AK G VA +KTREKF LAVSNL+A +  +AA
Sbjct: 245  AKAGHVASTKTREKFHLAVSNLTAKEPSVAA 275


>ref|XP_003548711.1| PREDICTED: uncharacterized protein LOC100812446 [Glycine max]
          Length = 276

 Score =  377 bits (969), Expect = e-102
 Identities = 199/271 (73%), Positives = 232/271 (85%), Gaps = 5/271 (1%)
 Frame = -1

Query: 1121 ETRTVEVGHVSDLAGEREIREFFSFSGEIEHVEIHSGVGQPKHAFVTFKDAKALEIALLL 942
            ETRTV+V  +SDLAG REI EFFSFSGEIEHVEI S  G+ K A+VTFKD KALEIALLL
Sbjct: 5    ETRTVQVKQLSDLAGVREIHEFFSFSGEIEHVEILSEDGKSKTAYVTFKDPKALEIALLL 64

Query: 941  SGATIVDQIVSINPVQNYIP--KIEEVREVDNAVSVA---TGESIGLNVETKNSSPTNGR 777
            SGATIVDQ+V I P +NY+P  +++EVR V+NA++V      E++  N+E   +SPTN R
Sbjct: 65   SGATIVDQVVKITPAENYVPNREMQEVRVVENAINVVPSENSENVSSNIEEGIASPTNRR 124

Query: 776  VYVSKAQGAVTNILAKGSAIGQDALNKAKAFDEKHQLTANASAKVISFDRRVGLTEKLTV 597
            +Y+S+AQ AVTN+LAKGSAI QDA+NKAKAFDEKHQLTANASAKVISFD+RVGLTEKLTV
Sbjct: 125  IYLSRAQDAVTNMLAKGSAIRQDAVNKAKAFDEKHQLTANASAKVISFDKRVGLTEKLTV 184

Query: 596  GISVVNEKVKSVDQRLQVSDKTMAALVAAERKLNDTGSAVKTSRYVTAGTAWLNGAFSKV 417
            GI+ +N+KVKSVDQRLQVSDKTMAA++AAERK+NDTGSAVKTSRYVTAGTAW NGAFSKV
Sbjct: 185  GIAAMNQKVKSVDQRLQVSDKTMAAIIAAERKINDTGSAVKTSRYVTAGTAWFNGAFSKV 244

Query: 416  AKVGQVAGSKTREKFDLAVSNLSATDSRIAA 324
            AK G VA SKTREKF LAVSNL++ +  +AA
Sbjct: 245  AKAGHVASSKTREKFHLAVSNLTSKEPSVAA 275


>ref|XP_002319148.1| predicted protein [Populus trichocarpa] gi|222857524|gb|EEE95071.1|
            predicted protein [Populus trichocarpa]
          Length = 269

 Score =  377 bits (968), Expect = e-102
 Identities = 201/268 (75%), Positives = 229/268 (85%), Gaps = 2/268 (0%)
 Frame = -1

Query: 1124 METRTVEVGHVSDLAGEREIREFFSFSGEIEHVEIHSGVGQPKHAFVTFKDAKALEIALL 945
            M+TRTVEV +VSDLA ERE+ EFFSFSGEIE++ I    GQ K AFVTFKD KALEIALL
Sbjct: 1    MQTRTVEVKNVSDLASEREVHEFFSFSGEIENIHIQRDHGQSKTAFVTFKDPKALEIALL 60

Query: 944  LSGATIVDQIVSINPVQNYIP--KIEEVREVDNAVSVATGESIGLNVETKNSSPTNGRVY 771
            LSGATIVDQIV+I PV+NY+P  +++EVR +D A+ V   E    NVE K S   +GRVY
Sbjct: 61   LSGATIVDQIVAITPVENYVPNRELQEVRNMDIAIHVVPSEDFPSNVEGKTSPSGSGRVY 120

Query: 770  VSKAQGAVTNILAKGSAIGQDALNKAKAFDEKHQLTANASAKVISFDRRVGLTEKLTVGI 591
            VS+AQ  VT++LAKGSAIGQDA+NKAKAFDEKH+L+ANAS KVISFDRRVGLTEKLTVGI
Sbjct: 121  VSRAQEVVTSMLAKGSAIGQDAMNKAKAFDEKHRLSANASEKVISFDRRVGLTEKLTVGI 180

Query: 590  SVVNEKVKSVDQRLQVSDKTMAALVAAERKLNDTGSAVKTSRYVTAGTAWLNGAFSKVAK 411
            SVVNEKVKSVDQRL VSDKTMAA+ AAERK+NDTGSAVK+SRYV+AGTAWLNGAFSKVAK
Sbjct: 181  SVVNEKVKSVDQRLHVSDKTMAAIFAAERKINDTGSAVKSSRYVSAGTAWLNGAFSKVAK 240

Query: 410  VGQVAGSKTREKFDLAVSNLSATDSRIA 327
             GQVAG+KTR KF+ AVSNL+A +S IA
Sbjct: 241  AGQVAGTKTRAKFNSAVSNLTAKESPIA 268


Top