BLASTX nr result

ID: Coptis25_contig00011315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011315
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001142472.1| uncharacterized protein LOC100274682 [Zea ma...    61   3e-07
tpg|DAA47113.1| TPA: hypothetical protein ZEAMMB73_545367 [Zea m...    60   6e-07
ref|NP_001143706.1| uncharacterized protein LOC100276444 [Zea ma...    60   8e-07
gb|AFW58325.1| hypothetical protein ZEAMMB73_969968 [Zea mays]         57   7e-06

>ref|NP_001142472.1| uncharacterized protein LOC100274682 [Zea mays]
           gi|195604762|gb|ACG24211.1| hypothetical protein [Zea
           mays]
          Length = 544

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 2/199 (1%)
 Frame = +1

Query: 43  GEKIVLRLTEDTLQPCSPKKGVHHLSSEIATLVKREIPIY--YKSFPDMIIGCAENDIFP 216
           G KI ++++    +P  P +     +SE   ++++ IPI+  +K +        EN+   
Sbjct: 221 GTKIPIQISNGKRRPEPPIQAAK-FASEGGIILRQHIPIFPHWKEYKKQ-----ENE--- 271

Query: 217 YKTIIDSLNNMFQFXXXXXXXXVAGDYVRDKIMAAWRSRKYDLKKTYLDGKDLEEVRTME 396
              I D +  +              D   D +    R  +Y LKK Y  G    +VRT  
Sbjct: 272 -GKITDYIGKLAGQFTMDVESNAVKDACVDMLKGGQRQMRYRLKKKYFTGVPANQVRTTS 330

Query: 397 SPEDIPLEDWRAFAELCNSDNFKEKSAKNKINRAKQTEPNCSGRTPAQLVRHEIAKERGV 576
               +  + WR   ++ +S N K    KNK+NR K   P C+G + + + +  + ++   
Sbjct: 331 PVSCMTDDQWRELVQMWSSPNHKNNCVKNKLNREKVQFPQCTG-SQSYVAKAYVVRQEKY 389

Query: 577 PDVEIFRGDLYLGMHSHGK 633
            DVE    DL+  MH   K
Sbjct: 390 KDVEPSAIDLFKEMHCSKK 408


>tpg|DAA47113.1| TPA: hypothetical protein ZEAMMB73_545367 [Zea mays]
          Length = 456

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 5/153 (3%)
 Frame = +1

Query: 292 DYVRDKIMAAWRSRKYDLKKTYLDGKDLEEVRTMESPEDIPLEDWRAFAELCNSDNFKEK 471
           D   D + +  R  +Y LK+ Y +G    +VRT      +   DWR   E  ++ N KE 
Sbjct: 214 DACLDMLKSGQRQMRYRLKQMYFNGILANQVRTTSPIPSMSDNDWRKLVEKWSTPNHKES 273

Query: 472 SAKNKINRAKQTEPNCSGRTPAQLVRHEIAKERGVPDVEIFRGDLYLGMHSHGKNKIPQR 651
             KNK+NR K     C+G + + + +  I K+    DVE    DL+  MH   K    + 
Sbjct: 274 CVKNKLNREKVQYQQCTG-SQSYIAKAFILKQEKYKDVEPSAIDLFKDMHCSKKKGFSEN 332

Query: 652 -----QDLVDKIGAHSASNPQSDPTCDAVAEVL 735
                 D+ + + A      Q     + V+ VL
Sbjct: 333 VQKAIVDMEEMVAAPVQDGQQPKSPTEVVSNVL 365


>ref|NP_001143706.1| uncharacterized protein LOC100276444 [Zea mays]
           gi|195625120|gb|ACG34390.1| hypothetical protein [Zea
           mays]
          Length = 537

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 5/153 (3%)
 Frame = +1

Query: 292 DYVRDKIMAAWRSRKYDLKKTYLDGKDLEEVRTMESPEDIPLEDWRAFAELCNSDNFKEK 471
           D   D + +  R  +Y LK+ Y +G    +VRT      +   DWR   E  ++ N KE 
Sbjct: 295 DACLDMLKSGQRQMRYRLKQKYFNGIPANQVRTTSPISSMSDNDWRKLVEKWSTPNHKES 354

Query: 472 SAKNKINRAKQTEPNCSGRTPAQLVRHEIAKERGVPDVEIFRGDLYLGMHSHGKNKIPQR 651
             KNK+NR K     C+G + + + +  I K+    D E    DL+  MH   K    + 
Sbjct: 355 CVKNKLNREKVQYQQCTG-SQSYIAKAFILKQEKYKDAEPSAIDLFKEMHCSKKKGFSEN 413

Query: 652 -----QDLVDKIGAHSASNPQSDPTCDAVAEVL 735
                 D+ + + A      Q     + V+ VL
Sbjct: 414 VQKAIVDMEEMVAAPVQDGQQPKSPTEVVSNVL 446


>gb|AFW58325.1| hypothetical protein ZEAMMB73_969968 [Zea mays]
          Length = 544

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
 Frame = +1

Query: 22  LSKRLKPGEKIVLRLTEDTLQPCSPKKGVHHLSSEIATLVKREIPIYYKSFP--DMIIGC 195
           L K L  G ++ + + E+  +P  P + V  L+SE    ++  +PIY KS+   D ++G 
Sbjct: 241 LEKMLNRGNRLAIHVAEEKKRPEVPLQAVK-LASETGVALRDNLPIY-KSWKLYDNVVGQ 298

Query: 196 AENDIFPYKTIIDSLNNMFQFXXXXXXXXVAGDYVRDKIMAAWRSRKYDLKKTYLDGK-D 372
           AE      + ++D + +             + D   D I    R  +Y+LK+ Y D    
Sbjct: 299 AE-----VRKVLDKVASRLDVDVKNEGP--SKDACIDIIKRGVRQTRYNLKRKYFDESLT 351

Query: 373 LEEVRTMESPEDIPLEDWRAFAELCNSDNFKEKSAKNKINR 495
            E++  M+ P  +  EDW    E       +EKSAKNK NR
Sbjct: 352 KEQLLAMQPPPKMKKEDWTGLVEYWCDPKNQEKSAKNKANR 392


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