BLASTX nr result

ID: Coptis25_contig00011309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011309
         (1528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35167.3| unnamed protein product [Vitis vinifera]              408   e-111
ref|XP_002521958.1| conserved hypothetical protein [Ricinus comm...   401   e-109
ref|XP_002319095.1| predicted protein [Populus trichocarpa] gi|2...   392   e-106
ref|XP_002461891.1| hypothetical protein SORBIDRAFT_02g009910 [S...   384   e-104
ref|NP_001145279.1| uncharacterized protein LOC100278574 [Zea ma...   383   e-104

>emb|CBI35167.3| unnamed protein product [Vitis vinifera]
          Length = 317

 Score =  408 bits (1048), Expect = e-111
 Identities = 205/315 (65%), Positives = 230/315 (73%), Gaps = 2/315 (0%)
 Frame = -3

Query: 1463 MGEESVYFSKDFEWQHLKNEIENNPSFAHHFLPFEPXXXXXXXXSNYSDAWRNFHNLHST 1284
            MG+E+ YFSKDFEW+ LK E+E+NPS ++HF  F+         S  S AW  FH  HST
Sbjct: 1    MGKEAEYFSKDFEWEKLKEEVESNPSLSYHFQTFDSNSPSLPSPSQDSQAWNQFHIRHST 60

Query: 1283 GKFFKERRYLLKEFPELLHANEDSKVLEVGCGNGSTVLPILRGNPSIIVYACDCSSEALE 1104
            G+FFKERRYLLKEFPELL  +E S VLEVGCGNGST LPILRG  +II+YACDCS+EALE
Sbjct: 61   GRFFKERRYLLKEFPELLSCDEYSFVLEVGCGNGSTALPILRGRDNIIIYACDCSNEALE 120

Query: 1103 RAKEVIATFDKVSIKQRFHPFVCDLSQGGFPNWLIYYGEAS--LNKPIDSIAGSSVHTEK 930
            RA E+I   +  S+  RFHPF CD S  GFP WL         L K  D I+      E 
Sbjct: 121  RANEMIHASNVGSVTDRFHPFCCDFSINGFPKWLACDSCQGNFLQKQHDQISDVKEKKET 180

Query: 929  ELDDLSFFKKGKCRIGGMDFVTMIFTLSAVPFQSMATAIVECLSVLKPGGLLLFRDYGLY 750
             L+DLS   + KC IGG+DFVT+IF LSAVP   M TAI EC SVLKPGGLLLFRDYGLY
Sbjct: 181  NLNDLSSLGESKCCIGGVDFVTLIFMLSAVPLHRMPTAIRECFSVLKPGGLLLFRDYGLY 240

Query: 749  DMTMLRFEPNKRVGFREYMRSDGTRSYFFSLDTVRELFLGAGCIELELEYCCVNSVNRLK 570
            DMTMLRFEP KRVGFREYMRSDGTRSYFF +DTVR+LF G+G  ELELEYCCV S NR  
Sbjct: 241  DMTMLRFEPEKRVGFREYMRSDGTRSYFFCMDTVRDLFTGSGFTELELEYCCVKSTNRRN 300

Query: 569  GKTMRRVWVHGKFQK 525
            GK+M RVWVHGKFQK
Sbjct: 301  GKSMHRVWVHGKFQK 315


>ref|XP_002521958.1| conserved hypothetical protein [Ricinus communis]
            gi|223538762|gb|EEF40362.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 332

 Score =  401 bits (1031), Expect = e-109
 Identities = 202/316 (63%), Positives = 240/316 (75%), Gaps = 3/316 (0%)
 Frame = -3

Query: 1457 EESVYFSKDFEWQHLKNEIENNPSFAHHFLPFEPXXXXXXXXSNYSDAWRNFHNLHSTGK 1278
            EE+ YFSKDFEW+ LK EIENNPSF++HFLPF          S  S+AW+ FH  HSTG+
Sbjct: 8    EEANYFSKDFEWETLKQEIENNPSFSYHFLPFVSSSLAHGQESGDSNAWQRFHVRHSTGR 67

Query: 1277 FFKERRYLLKEFPELLHANEDSKVLEVGCGNGSTVLPILRGNPSIIVYACDCSSEALERA 1098
            FFKERRYLLKEFPEL+   + SKVLEVGCGNGS+V+PILRGN  I VYACDCS+E L+RA
Sbjct: 68   FFKERRYLLKEFPELVSCRDFSKVLEVGCGNGSSVIPILRGNKRIFVYACDCSNETLDRA 127

Query: 1097 KEVIATFDKVSIKQRFHPFVCDLSQGGFPNWLIYYGEASLNKPIDSIAGSSVHTEKELDD 918
            +E++   + VS++ RF  F  D +  GFP WL+      +         SS   E+ + D
Sbjct: 128  QEIVNASNIVSVQGRFKTFYSDFAFTGFPKWLLCDSCRLILPHKQEECLSSDVKERSIID 187

Query: 917  LS---FFKKGKCRIGGMDFVTMIFTLSAVPFQSMATAIVECLSVLKPGGLLLFRDYGLYD 747
            ++     ++  C IGG+DFVT+IFTLSAV  + M TAI+ECLSVLKPGGLLLFRDYGLYD
Sbjct: 188  VNGSGSLEESGCCIGGVDFVTLIFTLSAVSLKMMPTAILECLSVLKPGGLLLFRDYGLYD 247

Query: 746  MTMLRFEPNKRVGFREYMRSDGTRSYFFSLDTVRELFLGAGCIELELEYCCVNSVNRLKG 567
            MTMLRFE NKRVGFREYMR+DGTRSYFFSLDTVR+LF+GAG IELELEYCCV SVNR KG
Sbjct: 248  MTMLRFEANKRVGFREYMRADGTRSYFFSLDTVRDLFVGAGFIELELEYCCVKSVNRRKG 307

Query: 566  KTMRRVWVHGKFQKAI 519
            K+MRRVW+HGKFQK +
Sbjct: 308  KSMRRVWIHGKFQKPV 323


>ref|XP_002319095.1| predicted protein [Populus trichocarpa] gi|222857471|gb|EEE95018.1|
            predicted protein [Populus trichocarpa]
          Length = 326

 Score =  392 bits (1008), Expect = e-106
 Identities = 199/321 (61%), Positives = 233/321 (72%), Gaps = 5/321 (1%)
 Frame = -3

Query: 1472 EKKMGEESVYFSKDFEWQHLKNEIENNPSFAHHFLPFE---PXXXXXXXXSNYSDAWRNF 1302
            E +   E+ YFSKDFEW+ L+ EIE+NPS+ +H LPF    P        S  S AW+ F
Sbjct: 4    EAEAEAEAEYFSKDFEWETLRQEIEDNPSYQYHLLPFTCTPPSQQQEIQVSEDSKAWKRF 63

Query: 1301 HNLHSTGKFFKERRYLLKEFPELLHANEDSKVLEVGCGNGSTVLPILRGNPSIIVYACDC 1122
            H  HS+GKFFKERRYLLKEFPEL+   E SKVLEVGCGNGS+ +PILRGN  IIVYACDC
Sbjct: 64   HLRHSSGKFFKERRYLLKEFPELVSCKEFSKVLEVGCGNGSSAIPILRGNKDIIVYACDC 123

Query: 1121 SSEALERAKEVIATFDKVSIKQRFHPFVCDLSQGGFPNWLIYYGEASLNKPIDSIAGSSV 942
            SSE LERAKE++ + +  +++ RFHPF CD +  GFP WL+                S V
Sbjct: 124  SSETLERAKEIVHSTNIFAVQNRFHPFFCDFAFTGFPKWLVCDSCVESFSLKQQEYSSDV 183

Query: 941  HTEKELDDLSFFKKGKCR--IGGMDFVTMIFTLSAVPFQSMATAIVECLSVLKPGGLLLF 768
                  D    +   +C   IGG+DFV++IFTLSAVP + M++AI+EC SVLKPGGLLLF
Sbjct: 184  KEGGVADKSGSYLSRECGCCIGGVDFVSLIFTLSAVPQKKMSSAIMECFSVLKPGGLLLF 243

Query: 767  RDYGLYDMTMLRFEPNKRVGFREYMRSDGTRSYFFSLDTVRELFLGAGCIELELEYCCVN 588
            RDYGLYDMTMLRFE  KRVGFREYMRSDGTRSYFF LDTVR+LF+G G IELELEYCCV 
Sbjct: 244  RDYGLYDMTMLRFEQEKRVGFREYMRSDGTRSYFFCLDTVRDLFVGVGFIELELEYCCVK 303

Query: 587  SVNRLKGKTMRRVWVHGKFQK 525
            SVNR KGK+M+RVWVHGKFQK
Sbjct: 304  SVNRRKGKSMQRVWVHGKFQK 324


>ref|XP_002461891.1| hypothetical protein SORBIDRAFT_02g009910 [Sorghum bicolor]
            gi|241925268|gb|EER98412.1| hypothetical protein
            SORBIDRAFT_02g009910 [Sorghum bicolor]
          Length = 331

 Score =  384 bits (986), Expect = e-104
 Identities = 190/312 (60%), Positives = 231/312 (74%), Gaps = 2/312 (0%)
 Frame = -3

Query: 1454 ESVYFSKDFEWQHLKNEIENNPSFAHHFLPF-EPXXXXXXXXSNYSDAWRNFHNLHSTGK 1278
            E+ Y S DFEW+ LK E+E+ P+F++H  PF EP           S+AWR+FH  H++GK
Sbjct: 18   EAEYHSHDFEWEELKEEVESGPAFSYHLSPFPEPAASTTSPPQLSSEAWRSFHRRHASGK 77

Query: 1277 FFKERRYLLKEFPELLHANEDSKVLEVGCGNGSTVLPILRGNPSIIVYACDCSSEALERA 1098
            FFKERRYLLKEFPEL  + + +KVLEVGCGNGST + ILR +  I V+ACDCS + LERA
Sbjct: 78   FFKERRYLLKEFPELCSSKDHAKVLEVGCGNGSTAVSILRSSERITVFACDCSKDTLERA 137

Query: 1097 KEVIATFDKVSIKQRFHPFVCDLSQGGFPNWLIYYG-EASLNKPIDSIAGSSVHTEKELD 921
             E+I+    + IK RFHPF+ D+S+  FP+WL     + SL K    +   S H  ++  
Sbjct: 138  NEIISNTKGIDIKDRFHPFLMDVSKETFPDWLFCKACQCSLGKDAALLLDPSHHGIRKEH 197

Query: 920  DLSFFKKGKCRIGGMDFVTMIFTLSAVPFQSMATAIVECLSVLKPGGLLLFRDYGLYDMT 741
             + F ++ +C  GGMDF+TMIFTLSA+PF  M T I +C+SVLKPGGLLLFRDYGLYDMT
Sbjct: 198  PV-FLRENQCCAGGMDFITMIFTLSAIPFDIMPTTIEQCVSVLKPGGLLLFRDYGLYDMT 256

Query: 740  MLRFEPNKRVGFREYMRSDGTRSYFFSLDTVRELFLGAGCIELELEYCCVNSVNRLKGKT 561
            MLRF P++RVGFREYMRSDGT SYFFSLDTVRELF  AG +ELELEYCCV SVNR KGKT
Sbjct: 257  MLRFLPHQRVGFREYMRSDGTFSYFFSLDTVRELFHAAGLVELELEYCCVKSVNRKKGKT 316

Query: 560  MRRVWVHGKFQK 525
            M+RVWVHGKFQK
Sbjct: 317  MQRVWVHGKFQK 328


>ref|NP_001145279.1| uncharacterized protein LOC100278574 [Zea mays]
            gi|195654037|gb|ACG46486.1| hypothetical protein [Zea
            mays]
          Length = 329

 Score =  383 bits (984), Expect = e-104
 Identities = 190/313 (60%), Positives = 230/313 (73%), Gaps = 2/313 (0%)
 Frame = -3

Query: 1457 EESVYFSKDFEWQHLKNEIENNPSFAHHFLPF-EPXXXXXXXXSNYSDAWRNFHNLHSTG 1281
            +E+ Y S+DFEW+ LK E+E+ P F++H  PF +P           S+AWR+FH  H++G
Sbjct: 16   DEAEYHSRDFEWEDLKEEVESGPVFSYHLSPFLDPAASTTSPPQPSSEAWRSFHRRHASG 75

Query: 1280 KFFKERRYLLKEFPELLHANEDSKVLEVGCGNGSTVLPILRGNPSIIVYACDCSSEALER 1101
            KFFKERRYLLKEFPEL  + + +KVLEVGCGNGST + ILR +  I V+ACDCS + LE+
Sbjct: 76   KFFKERRYLLKEFPELCSSQDHAKVLEVGCGNGSTAVSILRSSERITVFACDCSKDTLEK 135

Query: 1100 AKEVIATFDKVSIKQRFHPFVCDLSQGGFPNWLIYYG-EASLNKPIDSIAGSSVHTEKEL 924
            A E+I+    ++IK RFHPF+ D+S+  FP+WL     + SL K   S+   S H  +E 
Sbjct: 136  ANEIISNTKGINIKDRFHPFLMDVSKETFPDWLFCKACQTSLGKAAASLLDPSHHGIREH 195

Query: 923  DDLSFFKKGKCRIGGMDFVTMIFTLSAVPFQSMATAIVECLSVLKPGGLLLFRDYGLYDM 744
                F    +C  GGMDF+TMIFTLSA+PF  M T I +C+SVLKPGGLLLFRDYGLYDM
Sbjct: 196  P--VFLGDNRCCAGGMDFITMIFTLSAIPFDIMPTTIEQCVSVLKPGGLLLFRDYGLYDM 253

Query: 743  TMLRFEPNKRVGFREYMRSDGTRSYFFSLDTVRELFLGAGCIELELEYCCVNSVNRLKGK 564
            TMLRF P++RVGFREYMRSDGT SYFFSLDTVRELF  AG +ELELEYCCV SVNR  GK
Sbjct: 254  TMLRFLPHQRVGFREYMRSDGTFSYFFSLDTVRELFHAAGLVELELEYCCVKSVNRKNGK 313

Query: 563  TMRRVWVHGKFQK 525
            TMRRVWVHGKFQK
Sbjct: 314  TMRRVWVHGKFQK 326


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