BLASTX nr result

ID: Coptis25_contig00011307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011307
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17594.3| unnamed protein product [Vitis vinifera]              226   6e-57
ref|XP_002285539.1| PREDICTED: AP2-like ethylene-responsive tran...   224   2e-56
ref|XP_002891621.1| AP2/EREBP transcription factor [Arabidopsis ...   220   3e-55
ref|NP_001234943.1| PLETHORA 2 [Glycine max] gi|188531131|gb|ACD...   220   3e-55
gb|AAS97938.1| AP2/EREBP transcription factor [Arabidopsis thali...   220   3e-55

>emb|CBI17594.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score =  226 bits (576), Expect = 6e-57
 Identities = 120/220 (54%), Positives = 141/220 (64%)
 Frame = -1

Query: 849 TSSSSSGIVRVPPEKRSLYKFGQRTSNFRGVTRHRWTGKYEAHLWDNTTISEGRKRKGKQ 670
           T S  +G +   P K S+  FGQRTS +RGVTRHRWTG+YEAHLWDN+   EG+ RKG+Q
Sbjct: 207 TGSHQTGAIETVPRK-SIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQ 265

Query: 669 VYLGGYETEEKAAQIYDLAALKYWGANANTKLNFPISNYGKEIXXXXXXXXXEYVNSLRR 490
           VYLGGY+ EEKAA+ YDLAALKYWG    T  NFPISNY KEI         EYV SLRR
Sbjct: 266 VYLGGYDKEEKAARAYDLAALKYWGTTTTT--NFPISNYEKEIEEMKHMTRQEYVASLRR 323

Query: 489 NSVCFTRGCSIYRGVTRQNVGRRWQARIGRVAGGKDIYLGXXXXXXXXXXXXXXXAVKLR 310
            S  F+RG SIYRGVTR +   RWQARIGRVAG KD+YLG               A+K R
Sbjct: 324 KSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFR 383

Query: 309 GMNAITNFDISNYYKEGTKELDVIPIKSMEEESSTMRIRY 190
           G+NA+TNFD+S Y      E   +PI    + S +  + Y
Sbjct: 384 GLNAVTNFDMSRYDVNSILESSTLPIGGAAKRSGSNSVIY 423


>ref|XP_002285539.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           PLT2-like [Vitis vinifera]
          Length = 552

 Score =  224 bits (572), Expect = 2e-56
 Identities = 118/224 (52%), Positives = 150/224 (66%)
 Frame = -1

Query: 903 ISCSSGSGSGVRIAEVPVTSSSSSGIVRVPPEKRSLYKFGQRTSNFRGVTRHRWTGKYEA 724
           ++ S GSG G   +    + +SS+ IV   P +R+L  FGQRTS +RGVTRHRWTG+YEA
Sbjct: 128 LTLSMGSGKG---STCETSGNSSTSIVEAAP-RRTLDTFGQRTSIYRGVTRHRWTGRYEA 183

Query: 723 HLWDNTTISEGRKRKGKQVYLGGYETEEKAAQIYDLAALKYWGANANTKLNFPISNYGKE 544
           HLWDN+   EG+ RKG+QVYLGGY+ EEKAA+ YDLAALKYWG +  T  NFPISNY +E
Sbjct: 184 HLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGTSTTT--NFPISNYERE 241

Query: 543 IXXXXXXXXXEYVNSLRRNSVCFTRGCSIYRGVTRQNVGRRWQARIGRVAGGKDIYLGXX 364
           +         E+V S+RR S  F+RG S+YRGVTR +   RWQARIGRVAG KD+YLG  
Sbjct: 242 LEEMKHMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTF 301

Query: 363 XXXXXXXXXXXXXAVKLRGMNAITNFDISNYYKEGTKELDVIPI 232
                        A+K RG+NA+TNFD++ Y  +   E + +PI
Sbjct: 302 STEEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKSILESNTLPI 345


>ref|XP_002891621.1| AP2/EREBP transcription factor [Arabidopsis lyrata subsp. lyrata]
           gi|297337463|gb|EFH67880.1| AP2/EREBP transcription
           factor [Arabidopsis lyrata subsp. lyrata]
          Length = 568

 Score =  220 bits (561), Expect = 3e-55
 Identities = 113/206 (54%), Positives = 141/206 (68%)
 Frame = -1

Query: 849 TSSSSSGIVRVPPEKRSLYKFGQRTSNFRGVTRHRWTGKYEAHLWDNTTISEGRKRKGKQ 670
           T++S   IV   P +R+L  FGQRTS +RGVTRHRWTG+YEAHLWDN+   EG+ RKG+Q
Sbjct: 165 TNTSGGAIVEATP-RRTLETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ 223

Query: 669 VYLGGYETEEKAAQIYDLAALKYWGANANTKLNFPISNYGKEIXXXXXXXXXEYVNSLRR 490
           VYLGGY+ EEKAA+ YDLAALKYWG +  T  NFPI+NY KE+         E+V S+RR
Sbjct: 224 VYLGGYDKEEKAARAYDLAALKYWGPSTTT--NFPITNYEKEVEEMKNMTRQEFVASIRR 281

Query: 489 NSVCFTRGCSIYRGVTRQNVGRRWQARIGRVAGGKDIYLGXXXXXXXXXXXXXXXAVKLR 310
            S  F+RG S+YRGVTR +   RWQARIGRVAG KD+YLG               A+K R
Sbjct: 282 KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFR 341

Query: 309 GMNAITNFDISNYYKEGTKELDVIPI 232
           G+NA+TNF+I+ Y  +   E + +PI
Sbjct: 342 GLNAVTNFEINRYDVKAILESNTLPI 367


>ref|NP_001234943.1| PLETHORA 2 [Glycine max] gi|188531131|gb|ACD62791.1| PLETHORA 2
           [Glycine max]
          Length = 561

 Score =  220 bits (561), Expect = 3e-55
 Identities = 116/224 (51%), Positives = 148/224 (66%)
 Frame = -1

Query: 903 ISCSSGSGSGVRIAEVPVTSSSSSGIVRVPPEKRSLYKFGQRTSNFRGVTRHRWTGKYEA 724
           +S  SG  S    +    T+++++  V   P +R+L  FGQRTS +RGVTRHRWTG+YEA
Sbjct: 126 LSMGSGKDSTCETSGDNSTNTTTTTTVEAAP-RRTLDTFGQRTSIYRGVTRHRWTGRYEA 184

Query: 723 HLWDNTTISEGRKRKGKQVYLGGYETEEKAAQIYDLAALKYWGANANTKLNFPISNYGKE 544
           HLWDN+   EG+ RKG+QVYLGGY+ EEKAA+ YDLAALKYWG +  T  NFPISNY KE
Sbjct: 185 HLWDNSCRREGQSRKGRQVYLGGYDKEEKAARSYDLAALKYWGTSTTT--NFPISNYEKE 242

Query: 543 IXXXXXXXXXEYVNSLRRNSVCFTRGCSIYRGVTRQNVGRRWQARIGRVAGGKDIYLGXX 364
           +         E+V ++RR S  F+RG S+YRGVTR +   RWQARIGRVAG KD+YLG  
Sbjct: 243 LDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTF 302

Query: 363 XXXXXXXXXXXXXAVKLRGMNAITNFDISNYYKEGTKELDVIPI 232
                        A+K RG+NA+TNFD+S Y  +   E + +PI
Sbjct: 303 STEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPI 346


>gb|AAS97938.1| AP2/EREBP transcription factor [Arabidopsis thaliana]
          Length = 568

 Score =  220 bits (561), Expect = 3e-55
 Identities = 113/206 (54%), Positives = 141/206 (68%)
 Frame = -1

Query: 849 TSSSSSGIVRVPPEKRSLYKFGQRTSNFRGVTRHRWTGKYEAHLWDNTTISEGRKRKGKQ 670
           T++S   IV   P +R+L  FGQRTS +RGVTRHRWTG+YEAHLWDN+   EG+ RKG+Q
Sbjct: 165 TNTSGGAIVEATP-RRTLETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ 223

Query: 669 VYLGGYETEEKAAQIYDLAALKYWGANANTKLNFPISNYGKEIXXXXXXXXXEYVNSLRR 490
           VYLGGY+ EEKAA+ YDLAALKYWG +  T  NFPI+NY KE+         E+V S+RR
Sbjct: 224 VYLGGYDKEEKAARAYDLAALKYWGPSTTT--NFPITNYEKEVEEMKNMTRQEFVASIRR 281

Query: 489 NSVCFTRGCSIYRGVTRQNVGRRWQARIGRVAGGKDIYLGXXXXXXXXXXXXXXXAVKLR 310
            S  F+RG S+YRGVTR +   RWQARIGRVAG KD+YLG               A+K R
Sbjct: 282 KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFR 341

Query: 309 GMNAITNFDISNYYKEGTKELDVIPI 232
           G+NA+TNF+I+ Y  +   E + +PI
Sbjct: 342 GLNAVTNFEINRYDVKAILESNTLPI 367


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