BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011300
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134297.1| PREDICTED: pre-rRNA-processing protein esf1-...    56   9e-13
ref|XP_004155170.1| PREDICTED: pre-rRNA-processing protein esf1-...    56   9e-13
emb|CBI25839.3| unnamed protein product [Vitis vinifera]               50   8e-10
ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-...    50   8e-10
ref|NP_566132.2| uncharacterized protein [Arabidopsis thaliana] ...    49   1e-09

>ref|XP_004134297.1| PREDICTED: pre-rRNA-processing protein esf1-like [Cucumis sativus]
          Length = 740

 Score = 56.2 bits (134), Expect(2) = 9e-13
 Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 36/101 (35%)
 Frame = +3

Query: 69  AYHLYL-LSFHVPKGGEVLSVAIYSSDVEAAKAPIESIHS-------------------- 185
           A  LY+ LS  +PKGG++LSVA+Y S+    +   E +H                     
Sbjct: 226 AVDLYVVLSSFLPKGGQILSVAVYPSEFGLQRMKEEELHGPVGLFDGEQKKNDEDDDDDN 285

Query: 186 -----DNS----------RCYFAVVECDSCATADYIYETCD 263
                DN           R Y+AVVECDS ATADY+Y+TCD
Sbjct: 286 DDEEMDNEKLRAYEMSRLRYYYAVVECDSIATADYLYKTCD 326



 Score = 43.1 bits (100), Expect(2) = 9e-13
 Identities = 41/130 (31%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
 Frame = +1

Query: 271 DVLDLYLIPDSVKFEHPPHDVVRKGA---KIMDYMKPPQEIEDEPYYWNGIESE-CAILS 438
           ++LDL  IPDS+KFEHPP D   +     +++++  P  +       W+  E +    L 
Sbjct: 335 NILDLRFIPDSMKFEHPPRDTATEAPSSYEVLNFHTPALQHSKIHLSWDEDEPQRVKALK 394

Query: 439 FKVNLDKL-DGXXXXXXXXXXXXXXXXXXXGV----IPGAKMDKYFSLLQVD-DGRND-D 597
            K N D+L D                    G         K DKY +LLQ D DG  D  
Sbjct: 395 RKFNADQLADLELKEFLASDESESDDESDDGEDQVDKKRKKGDKYRALLQSDEDGEQDGG 454

Query: 598 KDMEVTISIG 627
           +DMEVT + G
Sbjct: 455 QDMEVTFNTG 464


>ref|XP_004155170.1| PREDICTED: pre-rRNA-processing protein esf1-like [Cucumis sativus]
          Length = 735

 Score = 56.2 bits (134), Expect(2) = 9e-13
 Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 36/101 (35%)
 Frame = +3

Query: 69  AYHLYL-LSFHVPKGGEVLSVAIYSSDVEAAKAPIESIHS-------------------- 185
           A  LY+ LS  +PKGG++LSVA+Y S+    +   E +H                     
Sbjct: 221 AVDLYVVLSSFLPKGGQILSVAVYPSEFGLQRMKEEELHGPVGLFDGEQKKNDEDDDDDN 280

Query: 186 -----DNS----------RCYFAVVECDSCATADYIYETCD 263
                DN           R Y+AVVECDS ATADY+Y+TCD
Sbjct: 281 DDEEMDNEKLRAYEMSRLRYYYAVVECDSIATADYLYKTCD 321



 Score = 43.1 bits (100), Expect(2) = 9e-13
 Identities = 41/130 (31%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
 Frame = +1

Query: 271 DVLDLYLIPDSVKFEHPPHDVVRKGA---KIMDYMKPPQEIEDEPYYWNGIESE-CAILS 438
           ++LDL  IPDS+KFEHPP D   +     +++++  P  +       W+  E +    L 
Sbjct: 330 NILDLRFIPDSMKFEHPPRDTATEAPSSYEVLNFHTPALQHSKIHLSWDEDEPQRVKALK 389

Query: 439 FKVNLDKL-DGXXXXXXXXXXXXXXXXXXXGV----IPGAKMDKYFSLLQVD-DGRND-D 597
            K N D+L D                    G         K DKY +LLQ D DG  D  
Sbjct: 390 RKFNADQLADLELKEFLASDESESDDESDDGEDQVDKKRKKGDKYRALLQSDEDGEQDGG 449

Query: 598 KDMEVTISIG 627
           +DMEVT + G
Sbjct: 450 QDMEVTFNTG 459


>emb|CBI25839.3| unnamed protein product [Vitis vinifera]
          Length = 738

 Score = 50.4 bits (119), Expect(2) = 8e-10
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 30/90 (33%)
 Frame = +3

Query: 84  LLSFHVPKGGEVLSVAIYSSDVEAAKAPIESIHS-------------------------- 185
           +LS  +PK G +LSVAIY S+    +   E++H                           
Sbjct: 207 VLSSFLPKDGHILSVAIYPSEFGLKRMEEEAVHGPIGLFDDEKEQSDDDGDNEIDDEKLR 266

Query: 186 --DNSRC--YFAVVECDSCATADYIYETCD 263
             + SR   Y+AVV+CDS ATADY+Y+ CD
Sbjct: 267 AYEKSRLSYYYAVVDCDSSATADYLYKACD 296



 Score = 38.9 bits (89), Expect(2) = 8e-10
 Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
 Frame = +1

Query: 271 DVLDLYLIPDSVKFEHPPHDVVRKG-AKI--MDYMKPPQEIEDEPYYWNGIESECA-ILS 438
           +VLDL  IPDS++F+HPPHD+  +  AK   +D+     +       W+  E + A  L 
Sbjct: 305 NVLDLRFIPDSMEFKHPPHDIATEAPAKYEGLDFHTRALQHSKIHISWDEDEPQRAKTLK 364

Query: 439 FKVNLDK-----LDGXXXXXXXXXXXXXXXXXXXGVIPGAKMDKYFSLLQVDDG-----R 588
            K N D+     +                           + +KY +LL+  DG      
Sbjct: 365 RKYNDDEQAELAMKEFLASDTDESETDDNENDDQSDKEHKRQNKYLALLESGDGSDRDDE 424

Query: 589 NDDKDMEVTISIG--GRTKCINGKNKNYWYDLIWDKYVECR 705
            D +DMEVT + G    +K I  K +    + +W+ Y++ R
Sbjct: 425 EDGQDMEVTFNTGLEDISKRILEKREKK-SETVWEAYLKKR 464


>ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-like [Vitis vinifera]
          Length = 726

 Score = 50.4 bits (119), Expect(2) = 8e-10
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 30/90 (33%)
 Frame = +3

Query: 84  LLSFHVPKGGEVLSVAIYSSDVEAAKAPIESIHS-------------------------- 185
           +LS  +PK G +LSVAIY S+    +   E++H                           
Sbjct: 207 VLSSFLPKDGHILSVAIYPSEFGLKRMEEEAVHGPIGLFDDEKEQSDDDGDNEIDDEKLR 266

Query: 186 --DNSRC--YFAVVECDSCATADYIYETCD 263
             + SR   Y+AVV+CDS ATADY+Y+ CD
Sbjct: 267 AYEKSRLSYYYAVVDCDSSATADYLYKACD 296



 Score = 38.9 bits (89), Expect(2) = 8e-10
 Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
 Frame = +1

Query: 271 DVLDLYLIPDSVKFEHPPHDVVRKG-AKI--MDYMKPPQEIEDEPYYWNGIESECA-ILS 438
           +VLDL  IPDS++F+HPPHD+  +  AK   +D+     +       W+  E + A  L 
Sbjct: 305 NVLDLRFIPDSMEFKHPPHDIATEAPAKYEGLDFHTRALQHSKIHISWDEDEPQRAKTLK 364

Query: 439 FKVNLDK-----LDGXXXXXXXXXXXXXXXXXXXGVIPGAKMDKYFSLLQVDDG-----R 588
            K N D+     +                           + +KY +LL+  DG      
Sbjct: 365 RKYNDDEVAELAMKEFLASDTDESETDDNENDDQSDKEHKRQNKYLALLESGDGSDRDDE 424

Query: 589 NDDKDMEVTISIG--GRTKCINGKNKNYWYDLIWDKYVECR 705
            D +DMEVT + G    +K I  K +    + +W+ Y++ R
Sbjct: 425 EDGQDMEVTFNTGLEDISKRILEKREKK-SETVWEAYLKKR 464


>ref|NP_566132.2| uncharacterized protein [Arabidopsis thaliana]
           gi|6714472|gb|AAF26158.1|AC008261_15 hypothetical
           protein [Arabidopsis thaliana]
           gi|332640097|gb|AEE73618.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 713

 Score = 48.5 bits (114), Expect(2) = 1e-09
 Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 35/95 (36%)
 Frame = +3

Query: 84  LLSFHVPKGGEVLSVAIYSSDVEAAKAPIESIH------------SDNS----------- 194
           +L+  +PK G +LSVA+Y S+    +   E IH            SD+            
Sbjct: 220 VLNSFLPKDGRILSVAVYPSEFGLERMKEEEIHGPVIDGDKKNDASDDEDEEEEEDEDVI 279

Query: 195 ------------RCYFAVVECDSCATADYIYETCD 263
                       + YFAV ECDS ATADY+Y++CD
Sbjct: 280 NQKLRAYEISRLKYYFAVAECDSSATADYLYKSCD 314



 Score = 40.4 bits (93), Expect(2) = 1e-09
 Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 21/165 (12%)
 Frame = +1

Query: 277 LDLYLIPDSVKFEHPPHDVVRK---GAKIMDYMKPPQEIEDEPYYWNGIE-SECAILSFK 444
           LDL  IPDS++F+HPP D+  +   G + +D+     ++      W+  E      L+ K
Sbjct: 325 LDLRFIPDSMEFKHPPRDIASEAPAGYEGLDFQSRALQMSKVNLSWDEDEPHRIKTLNQK 384

Query: 445 VN---LDKLDGXXXXXXXXXXXXXXXXXXXGVI-----PGAKMDKYFSLLQVDDGRND-- 594
            N   L  L+                     VI        K DKY +L++ +D  +D  
Sbjct: 385 FNPEQLANLEMKEFLASDESDSDEEDDLGNEVINQSKKKDKKKDKYRALIEAEDVDSDKD 444

Query: 595 -----DKDMEVTISIG--GRTKCINGKNKNYWYDLIWDKYVECRK 708
                D+DMEVT + G    +K I  K K+   + +W+ Y+  R+
Sbjct: 445 LEEENDQDMEVTFNTGLEDLSKEIL-KKKDNQSESVWETYLRQRR 488