BLASTX nr result

ID: Coptis25_contig00011298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011298
         (1649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272590.2| PREDICTED: ribose-phosphate pyrophosphokinas...   371   e-153
emb|CBI23369.3| unnamed protein product [Vitis vinifera]              371   e-153
ref|XP_004135267.1| PREDICTED: ribose-phosphate pyrophosphokinas...   363   e-153
ref|XP_003517715.1| PREDICTED: ribose-phosphate pyrophosphokinas...   355   e-150
ref|XP_002527916.1| Ribose-phosphate pyrophosphokinase, putative...   359   e-150

>ref|XP_002272590.2| PREDICTED: ribose-phosphate pyrophosphokinase 3, mitochondrial
           [Vitis vinifera]
          Length = 399

 Score =  371 bits (952), Expect(2) = e-153
 Identities = 193/271 (71%), Positives = 218/271 (80%), Gaps = 2/271 (0%)
 Frame = +1

Query: 49  ASPLTSSSSLINPTLQKKINSSLSLPKPSEIKLPIKCELKRFRNTKNWS--FDRVSEYSQ 222
           A PL  S S    TL+  +   L +P   + K   +CEL  F   + W+  FD  +  + 
Sbjct: 10  APPLHCSFSAPIQTLKPILTLPL-IPFSKKDKFRFRCELTSFGKPQKWAVEFDSTTIPNP 68

Query: 223 RVGTMESTILNSSSSTRNSKKVCLFYCDEMKSLAERVAAESDFIQLQNINWRKFEDGFPN 402
           R   M ST    +SS RN+KKVCLFYC E K+LAER+AAESD I+L++I WR FEDGFPN
Sbjct: 69  RPVLMASTA-TLTSSPRNAKKVCLFYCAETKALAERIAAESDAIELRSITWRTFEDGFPN 127

Query: 403 LFIPNARGIRGEHVAFLASFSSPAVIFEQLSVIYALPKLFISSFTLVLPFFPTGTSERVE 582
           LFI NA+GIRG+HVAFLASFSSP VIFEQLSVIYALPKLFISSFTLVLPFFPTGTSER+E
Sbjct: 128 LFISNAQGIRGQHVAFLASFSSPGVIFEQLSVIYALPKLFISSFTLVLPFFPTGTSERME 187

Query: 583 EEGDIATAFALSRILSHIPISRGGPTSLVIFDIHALQERFYFGDNVLPCFESGVPLLKNR 762
           EEGDIATAF L+RILS+IPISRGGPTSLV FDIHALQERFYFGDN+LPCF+SG+PLLK R
Sbjct: 188 EEGDIATAFTLARILSNIPISRGGPTSLVTFDIHALQERFYFGDNILPCFDSGIPLLKAR 247

Query: 763 LQQLPDSDNITIAFPDDGAWKRFHKQLQHFP 855
           LQQLPDSDNI+IAFPDDGAWKRFHKQLQHFP
Sbjct: 248 LQQLPDSDNISIAFPDDGAWKRFHKQLQHFP 278



 Score =  200 bits (508), Expect(2) = e-153
 Identities = 94/115 (81%), Positives = 105/115 (91%)
 Frame = +3

Query: 924  VREGDQRIVRLKEGDPRGHHVVIVDDLVQSGGTLIECQKVLAAHGATKISAYVTHGIFPN 1103
            VREG+QRIVR+KEGDP+G HVVIVDDLVQSGGTLI+CQKVLA+HGA KISAYVTHGIFPN
Sbjct: 285  VREGNQRIVRIKEGDPKGRHVVIVDDLVQSGGTLIQCQKVLASHGAAKISAYVTHGIFPN 344

Query: 1104 RSWERFQHDNGGSPQDGLTYFWITDSCPLTVKQVRNRKPFEVLSLASSIEAAVQI 1268
            RSW+RF  D GG P +GLTYFWITDSCPLTVK+V+N+ PFEVLSLASSI A +QI
Sbjct: 345  RSWQRFGEDKGGCPANGLTYFWITDSCPLTVKEVKNKPPFEVLSLASSIAATLQI 399


>emb|CBI23369.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  371 bits (952), Expect(2) = e-153
 Identities = 193/271 (71%), Positives = 218/271 (80%), Gaps = 2/271 (0%)
 Frame = +1

Query: 49  ASPLTSSSSLINPTLQKKINSSLSLPKPSEIKLPIKCELKRFRNTKNWS--FDRVSEYSQ 222
           A PL  S S    TL+  +   L +P   + K   +CEL  F   + W+  FD  +  + 
Sbjct: 4   APPLHCSFSAPIQTLKPILTLPL-IPFSKKDKFRFRCELTSFGKPQKWAVEFDSTTIPNP 62

Query: 223 RVGTMESTILNSSSSTRNSKKVCLFYCDEMKSLAERVAAESDFIQLQNINWRKFEDGFPN 402
           R   M ST    +SS RN+KKVCLFYC E K+LAER+AAESD I+L++I WR FEDGFPN
Sbjct: 63  RPVLMASTA-TLTSSPRNAKKVCLFYCAETKALAERIAAESDAIELRSITWRTFEDGFPN 121

Query: 403 LFIPNARGIRGEHVAFLASFSSPAVIFEQLSVIYALPKLFISSFTLVLPFFPTGTSERVE 582
           LFI NA+GIRG+HVAFLASFSSP VIFEQLSVIYALPKLFISSFTLVLPFFPTGTSER+E
Sbjct: 122 LFISNAQGIRGQHVAFLASFSSPGVIFEQLSVIYALPKLFISSFTLVLPFFPTGTSERME 181

Query: 583 EEGDIATAFALSRILSHIPISRGGPTSLVIFDIHALQERFYFGDNVLPCFESGVPLLKNR 762
           EEGDIATAF L+RILS+IPISRGGPTSLV FDIHALQERFYFGDN+LPCF+SG+PLLK R
Sbjct: 182 EEGDIATAFTLARILSNIPISRGGPTSLVTFDIHALQERFYFGDNILPCFDSGIPLLKAR 241

Query: 763 LQQLPDSDNITIAFPDDGAWKRFHKQLQHFP 855
           LQQLPDSDNI+IAFPDDGAWKRFHKQLQHFP
Sbjct: 242 LQQLPDSDNISIAFPDDGAWKRFHKQLQHFP 272



 Score =  200 bits (508), Expect(2) = e-153
 Identities = 94/115 (81%), Positives = 105/115 (91%)
 Frame = +3

Query: 924  VREGDQRIVRLKEGDPRGHHVVIVDDLVQSGGTLIECQKVLAAHGATKISAYVTHGIFPN 1103
            VREG+QRIVR+KEGDP+G HVVIVDDLVQSGGTLI+CQKVLA+HGA KISAYVTHGIFPN
Sbjct: 279  VREGNQRIVRIKEGDPKGRHVVIVDDLVQSGGTLIQCQKVLASHGAAKISAYVTHGIFPN 338

Query: 1104 RSWERFQHDNGGSPQDGLTYFWITDSCPLTVKQVRNRKPFEVLSLASSIEAAVQI 1268
            RSW+RF  D GG P +GLTYFWITDSCPLTVK+V+N+ PFEVLSLASSI A +QI
Sbjct: 339  RSWQRFGEDKGGCPANGLTYFWITDSCPLTVKEVKNKPPFEVLSLASSIAATLQI 393


>ref|XP_004135267.1| PREDICTED: ribose-phosphate pyrophosphokinase 3, mitochondrial-like
           [Cucumis sativus]
          Length = 415

 Score =  363 bits (932), Expect(2) = e-153
 Identities = 177/257 (68%), Positives = 211/257 (82%), Gaps = 16/257 (6%)
 Frame = +1

Query: 133 SEIKLPIKCELKRFRNTKNWSFDRVSEYSQRVGTMESTILNSSS---------------- 264
           S+IK  I CE+K F N+ +W+ + V   +    +++++   S+S                
Sbjct: 38  SKIKNRIACEIKNFENSYHWTIESVPGTTDSFCSIQNSASTSTSIPMATASAAIAALELT 97

Query: 265 STRNSKKVCLFYCDEMKSLAERVAAESDFIQLQNINWRKFEDGFPNLFIPNARGIRGEHV 444
           S  ++KK+CLF+C E K+LAE++A ESD I L++I+WRKFEDGFPN+FIPNA+GIRG+HV
Sbjct: 98  SKNDAKKICLFFCPETKALAEKIADESDGIDLRSISWRKFEDGFPNIFIPNAQGIRGQHV 157

Query: 445 AFLASFSSPAVIFEQLSVIYALPKLFISSFTLVLPFFPTGTSERVEEEGDIATAFALSRI 624
           AFLASFSSP+VIFEQLSVIYALPKLFISSFTLVLPFFPTGT ER+E+EGD+ATAF L+RI
Sbjct: 158 AFLASFSSPSVIFEQLSVIYALPKLFISSFTLVLPFFPTGTFERMEDEGDVATAFTLARI 217

Query: 625 LSHIPISRGGPTSLVIFDIHALQERFYFGDNVLPCFESGVPLLKNRLQQLPDSDNITIAF 804
           LS+IPISRGGPTSLV FDIHALQERFYFGDN+LPCFESG+PLLKNRLQQLPDSDNI IAF
Sbjct: 218 LSNIPISRGGPTSLVTFDIHALQERFYFGDNILPCFESGIPLLKNRLQQLPDSDNIAIAF 277

Query: 805 PDDGAWKRFHKQLQHFP 855
           PDDGAWKRFH QLQHFP
Sbjct: 278 PDDGAWKRFHNQLQHFP 294



 Score =  206 bits (525), Expect(2) = e-153
 Identities = 97/115 (84%), Positives = 109/115 (94%)
 Frame = +3

Query: 924  VREGDQRIVRLKEGDPRGHHVVIVDDLVQSGGTLIECQKVLAAHGATKISAYVTHGIFPN 1103
            VREGDQRIVRLKEG+P+G HVVIVDDLVQSGGTL ECQKVLAAHGA+KISAYVTHGIFPN
Sbjct: 301  VREGDQRIVRLKEGEPKGRHVVIVDDLVQSGGTLRECQKVLAAHGASKISAYVTHGIFPN 360

Query: 1104 RSWERFQHDNGGSPQDGLTYFWITDSCPLTVKQVRNRKPFEVLSLASSIEAAVQI 1268
            RSW+RF+HDNGG+P++GLTYFWITDSCPLTVK+V N+ PFEVLSLA SI AA++I
Sbjct: 361  RSWQRFEHDNGGNPENGLTYFWITDSCPLTVKEVVNKAPFEVLSLAGSIAAALRI 415


>ref|XP_003517715.1| PREDICTED: ribose-phosphate pyrophosphokinase 3, mitochondrial-like
           [Glycine max]
          Length = 408

 Score =  355 bits (910), Expect(2) = e-150
 Identities = 187/292 (64%), Positives = 226/292 (77%), Gaps = 21/292 (7%)
 Frame = +1

Query: 43  MAASPLTSSSSLINPTLQKKINSSLSLPKPSEIK--------LPIKCELKRF--RNTKNW 192
           MAA+P   S S+++         S SL +PS  K          ++CE+K F   + + W
Sbjct: 1   MAATPPLQSFSVLHSN-----KPSHSLLRPSSNKNRTFFSFTSNLRCEIKGFDFESHRGW 55

Query: 193 SFDRVSEYSQ---RVGTMESTILNSSSS--------TRNSKKVCLFYCDEMKSLAERVAA 339
           + +RVS+ S+      T  S+ L S S+        T+N+KKV LFYC E K+LAE++AA
Sbjct: 56  TIERVSDMSKDSTNSHTNPSSPLLSVSAVTSASQFPTKNAKKVVLFYCAETKALAEKIAA 115

Query: 340 ESDFIQLQNINWRKFEDGFPNLFIPNARGIRGEHVAFLASFSSPAVIFEQLSVIYALPKL 519
           E+D I+L++I+W KF DGFPN+FIPNA+GIRG HVAFLASFSSPAVIFEQ+ VIYALPKL
Sbjct: 116 ETDAIELRSISWGKFPDGFPNIFIPNAQGIRGMHVAFLASFSSPAVIFEQIPVIYALPKL 175

Query: 520 FISSFTLVLPFFPTGTSERVEEEGDIATAFALSRILSHIPISRGGPTSLVIFDIHALQER 699
           FI+SFTLVLPFFPTGTSER+E+EGDIATAF L+R+LS+IPISRGGPTSLV FDIHALQER
Sbjct: 176 FIASFTLVLPFFPTGTSERMEDEGDIATAFTLARLLSNIPISRGGPTSLVTFDIHALQER 235

Query: 700 FYFGDNVLPCFESGVPLLKNRLQQLPDSDNITIAFPDDGAWKRFHKQLQHFP 855
           FYFGDN+LPCFESG+PLLK RLQ LPDSDNI++AFPDDGAWKRFHKQLQHFP
Sbjct: 236 FYFGDNILPCFESGIPLLKRRLQDLPDSDNISVAFPDDGAWKRFHKQLQHFP 287



 Score =  206 bits (525), Expect(2) = e-150
 Identities = 97/115 (84%), Positives = 104/115 (90%)
 Frame = +3

Query: 924  VREGDQRIVRLKEGDPRGHHVVIVDDLVQSGGTLIECQKVLAAHGATKISAYVTHGIFPN 1103
            VREGDQRIVR+KEGDPRG H+VIVDDLVQSGGTLIECQKVLAAHGATKISAYVTHGIFPN
Sbjct: 294  VREGDQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGATKISAYVTHGIFPN 353

Query: 1104 RSWERFQHDNGGSPQDGLTYFWITDSCPLTVKQVRNRKPFEVLSLASSIEAAVQI 1268
            +SW RF HDNGG P+   TYFWITDSCPLTVK V NR PFE+LSLASSI A++QI
Sbjct: 354  KSWARFGHDNGGHPESAFTYFWITDSCPLTVKDVMNRPPFEILSLASSISASLQI 408


>ref|XP_002527916.1| Ribose-phosphate pyrophosphokinase, putative [Ricinus communis]
           gi|223532691|gb|EEF34473.1| Ribose-phosphate
           pyrophosphokinase, putative [Ricinus communis]
          Length = 407

 Score =  359 bits (921), Expect(2) = e-150
 Identities = 190/287 (66%), Positives = 219/287 (76%), Gaps = 16/287 (5%)
 Frame = +1

Query: 46  AASPLTSSSSLINPTLQK-------KINSSLSLPKPSEIK-LPIKCE--------LKRFR 177
           A SPL +  + I  T +        K++  L + +PS+ K L +KC+        LK   
Sbjct: 3   ATSPLRNPLNTITTTTKASSAAKSPKLSCFLQVNRPSKSKILTVKCDNNHPQNLSLKFLS 62

Query: 178 NTKNWSFDRVSEYSQRVGTMESTILNSSSSTRNSKKVCLFYCDEMKSLAERVAAESDFIQ 357
            T +         S+ V    ++   S+S T   K+VCLFYCDE K+LAERVAAESD I+
Sbjct: 63  GTDHIIQSSSLSLSKSVSMAAASAQESASKTM--KRVCLFYCDETKALAERVAAESDAIE 120

Query: 358 LQNINWRKFEDGFPNLFIPNARGIRGEHVAFLASFSSPAVIFEQLSVIYALPKLFISSFT 537
           L+ I WRKFEDGFPNLFIPNA+ IRG+HVAFLASFSSP VIFEQLS+IYALPKLFISSFT
Sbjct: 121 LRAITWRKFEDGFPNLFIPNAQAIRGQHVAFLASFSSPQVIFEQLSIIYALPKLFISSFT 180

Query: 538 LVLPFFPTGTSERVEEEGDIATAFALSRILSHIPISRGGPTSLVIFDIHALQERFYFGDN 717
           LVLPFFPTGTSER+E+EGD+ATAF L+RILS+IP SRGGPTSLVIFDIHALQERFYFGDN
Sbjct: 181 LVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTSLVIFDIHALQERFYFGDN 240

Query: 718 VLPCFESGVPLLKNRLQQLPDSDNITIAFPDDGAWKRFHKQLQHFPM 858
           +LP FESG+PLLKNRLQQLPDSDNI IAFPDDGAWKRFH QLQHFPM
Sbjct: 241 ILPFFESGIPLLKNRLQQLPDSDNIAIAFPDDGAWKRFHNQLQHFPM 287



 Score =  199 bits (507), Expect(2) = e-150
 Identities = 95/115 (82%), Positives = 105/115 (91%)
 Frame = +3

Query: 924  VREGDQRIVRLKEGDPRGHHVVIVDDLVQSGGTLIECQKVLAAHGATKISAYVTHGIFPN 1103
            VREG+QRIVR+KEGDP+G HVVIVDDLVQSGGTLIECQKVLA HGA +ISAYVTHGIFPN
Sbjct: 293  VREGNQRIVRIKEGDPQGRHVVIVDDLVQSGGTLIECQKVLADHGAARISAYVTHGIFPN 352

Query: 1104 RSWERFQHDNGGSPQDGLTYFWITDSCPLTVKQVRNRKPFEVLSLASSIEAAVQI 1268
            RSWERF+ DNGG P +GLTYFWITDSCP TV++V N+ PFEVLSLASSI AA+QI
Sbjct: 353  RSWERFEFDNGGHPGNGLTYFWITDSCPSTVREVMNKPPFEVLSLASSIAAALQI 407


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