BLASTX nr result
ID: Coptis25_contig00011288
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00011288 (565 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001142472.1| uncharacterized protein LOC100274682 [Zea ma... 55 6e-06 >ref|NP_001142472.1| uncharacterized protein LOC100274682 [Zea mays] gi|195604762|gb|ACG24211.1| hypothetical protein [Zea mays] Length = 544 Score = 55.5 bits (132), Expect = 6e-06 Identities = 33/100 (33%), Positives = 49/100 (49%) Frame = -3 Query: 563 KYDLKKTYFDGKDPE*VRTMEAPKDIPLEDWRAFVDLCNSNDFKAKSVKNKINRTKQTEP 384 +Y LKK YF G VRT + + WR V + +S + K VKNK+NR K P Sbjct: 310 RYRLKKKYFTGVPANQVRTTSPVSCMTDDQWRELVQMWSSPNHKNNCVKNKLNREKVQFP 369 Query: 383 NCSGRTPAQLVRHKIAKERGVPDVEVFRGDLYLGMHSHGK 264 C+G + + + + + ++ DVE DL+ MH K Sbjct: 370 QCTG-SQSYVAKAYVVRQEKYKDVEPSAIDLFKEMHCSKK 408