BLASTX nr result

ID: Coptis25_contig00011279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011279
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612270.1| Senescence-associated protein DIN1 [Medicago...    83   2e-14
ref|NP_001235646.1| uncharacterized protein LOC100305968 [Glycin...    77   1e-12
ref|XP_002530729.1| Senescence-associated protein DIN1, putative...    77   1e-12
dbj|BAD61695.1| putative Ntdin [Oryza sativa Japonica Group] gi|...    75   4e-12
ref|NP_001058618.1| Os06g0725000 [Oryza sativa Japonica Group] g...    75   4e-12

>ref|XP_003612270.1| Senescence-associated protein DIN1 [Medicago truncatula]
           gi|217071246|gb|ACJ83983.1| unknown [Medicago
           truncatula] gi|355513605|gb|AES95228.1|
           Senescence-associated protein DIN1 [Medicago truncatula]
           gi|388495624|gb|AFK35878.1| unknown [Medicago
           truncatula]
          Length = 185

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 45/83 (54%), Positives = 56/83 (67%)
 Frame = +1

Query: 259 TFSKSQKQCQLHQLHLIGNKPHAFSNSRLMAMASGENADRIEVPRSVPVRVAHELLQAGH 438
           +F KS K  ++H+  ++  K   FSN R M    G   + + VP SVPVRVAHELL AGH
Sbjct: 33  SFIKSSKFNKVHRSVVVQPK---FSNFRTMCGLKGNLEEVVGVPTSVPVRVAHELLLAGH 89

Query: 439 RYLDVRTAEEFSAGHPLGAVNIP 507
           +YLDVRT EEF+AGH  GA+NIP
Sbjct: 90  KYLDVRTTEEFNAGHAPGAINIP 112


>ref|NP_001235646.1| uncharacterized protein LOC100305968 [Glycine max]
           gi|255627141|gb|ACU13915.1| unknown [Glycine max]
          Length = 186

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/63 (65%), Positives = 44/63 (69%)
 Frame = +1

Query: 319 PHAFSNSRLMAMASGENADRIEVPRSVPVRVAHELLQAGHRYLDVRTAEEFSAGHPLGAV 498
           P  F N R  A   G N + I VP SVPVRVA+ELL AGHRYLDVRT EEF AGH  GA+
Sbjct: 52  PPKFPNFRREASLQG-NLEAIRVPTSVPVRVAYELLLAGHRYLDVRTPEEFDAGHAPGAI 110

Query: 499 NIP 507
           NIP
Sbjct: 111 NIP 113


>ref|XP_002530729.1| Senescence-associated protein DIN1, putative [Ricinus communis]
           gi|223529693|gb|EEF31635.1| Senescence-associated
           protein DIN1, putative [Ricinus communis]
          Length = 182

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/47 (76%), Positives = 40/47 (85%)
 Frame = +1

Query: 367 NADRIEVPRSVPVRVAHELLQAGHRYLDVRTAEEFSAGHPLGAVNIP 507
           N + + VP SVPVRVAHELL AGHRYLDVRT EEFSAGH +GA+NIP
Sbjct: 63  NLEAVGVPTSVPVRVAHELLLAGHRYLDVRTPEEFSAGHVVGAINIP 109


>dbj|BAD61695.1| putative Ntdin [Oryza sativa Japonica Group]
           gi|218198906|gb|EEC81333.1| hypothetical protein
           OsI_24507 [Oryza sativa Indica Group]
          Length = 170

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/41 (85%), Positives = 37/41 (90%)
 Frame = +1

Query: 385 VPRSVPVRVAHELLQAGHRYLDVRTAEEFSAGHPLGAVNIP 507
           VPRSVPVRVAHEL QAGHRYLDVRT  EF+ GHP+GAVNIP
Sbjct: 57  VPRSVPVRVAHELQQAGHRYLDVRTEGEFAGGHPVGAVNIP 97


>ref|NP_001058618.1| Os06g0725000 [Oryza sativa Japonica Group]
           gi|54291018|dbj|BAD61696.1| putative Ntdin [Oryza sativa
           Japonica Group] gi|113596658|dbj|BAF20532.1|
           Os06g0725000 [Oryza sativa Japonica Group]
           gi|215767194|dbj|BAG99422.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 116

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/41 (85%), Positives = 37/41 (90%)
 Frame = +1

Query: 385 VPRSVPVRVAHELLQAGHRYLDVRTAEEFSAGHPLGAVNIP 507
           VPRSVPVRVAHEL QAGHRYLDVRT  EF+ GHP+GAVNIP
Sbjct: 3   VPRSVPVRVAHELQQAGHRYLDVRTEGEFAGGHPVGAVNIP 43


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