BLASTX nr result

ID: Coptis25_contig00011269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011269
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635067.1| PREDICTED: uncharacterized protein LOC100246...   153   6e-35
ref|XP_002317257.1| predicted protein [Populus trichocarpa] gi|2...   145   2e-32
ref|XP_002524713.1| conserved hypothetical protein [Ricinus comm...   140   3e-31
ref|XP_002889864.1| hypothetical protein ARALYDRAFT_471274 [Arab...   137   3e-30
ref|NP_001242047.1| uncharacterized protein LOC100806189 [Glycin...   137   3e-30

>ref|XP_003635067.1| PREDICTED: uncharacterized protein LOC100246768 isoform 1 [Vitis
           vinifera] gi|297745662|emb|CBI40873.3| unnamed protein
           product [Vitis vinifera]
          Length = 249

 Score =  153 bits (386), Expect = 6e-35
 Identities = 79/145 (54%), Positives = 91/145 (62%)
 Frame = -3

Query: 832 DYESSGEFGGGVQRMWEGEILDCFEDRRIAVETACCPCYRFGKNMRRAGFGPCFIQGGVY 653
           D E SGEFGG V RMWEGE+LDCFEDRRIA++TACCPCYRFGKNMRRAGFG CFIQG VY
Sbjct: 55  DDEDSGEFGG-VFRMWEGELLDCFEDRRIAIQTACCPCYRFGKNMRRAGFGSCFIQGTVY 113

Query: 652 LILXXXXXXXXXXXXXXNQRGFLYLAIVLTVSSGTYLGFFRRQIRKQFNIGVHISSLISF 473
            IL               +  FLY+A+  T+S GTY+GFFR QI+K+FNI    SSL   
Sbjct: 114 FILSFSAFLSCIAFFVTKRHCFLYMAVAFTISIGTYMGFFRTQIKKKFNIRGGDSSLDD- 172

Query: 472 YSFDFLAGIMVAIYAFFLFIPCCVV 398
                          + L  PCC +
Sbjct: 173 -------------CVYHLICPCCTL 184


>ref|XP_002317257.1| predicted protein [Populus trichocarpa] gi|222860322|gb|EEE97869.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  145 bits (365), Expect = 2e-32
 Identities = 75/127 (59%), Positives = 86/127 (67%), Gaps = 3/127 (2%)
 Frame = -3

Query: 853 SREKLDDD---YESSGEFGGGVQRMWEGEILDCFEDRRIAVETACCPCYRFGKNMRRAGF 683
           S E+ DDD   Y + G  GGG  RMWEGE+LDCF+DRRIA+E+ CCPCYRFGKNMRRAGF
Sbjct: 30  SNEEEDDDLNRYNNGG--GGGGFRMWEGEVLDCFDDRRIAIESLCCPCYRFGKNMRRAGF 87

Query: 682 GPCFIQGGVYLILXXXXXXXXXXXXXXNQRGFLYLAIVLTVSSGTYLGFFRRQIRKQFNI 503
           G CF+QG  Y IL               +R FLYL+IV T S G YLGFFR Q+RK+FNI
Sbjct: 88  GSCFLQGIAYYILGLGALLNFIAFIVTKRRRFLYLSIVFTFSLGIYLGFFRTQMRKKFNI 147

Query: 502 GVHISSL 482
               SSL
Sbjct: 148 RGSDSSL 154


>ref|XP_002524713.1| conserved hypothetical protein [Ricinus communis]
           gi|223536074|gb|EEF37732.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 242

 Score =  140 bits (354), Expect = 3e-31
 Identities = 79/166 (47%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
 Frame = -3

Query: 874 QTGGGFSSREKLDDDYESS-------GEFGGGVQRMWEGEILDCFEDRRIAVETACCPCY 716
           QT G +   E  D D  S+       GEFGG V RMWEGE+LDCF+D RIA+E+ CCPCY
Sbjct: 41  QTQGKWRKLESNDFDGNSNNGGDIVGGEFGG-VFRMWEGEVLDCFDDHRIAIESLCCPCY 99

Query: 715 RFGKNMRRAGFGPCFIQGGVYLILXXXXXXXXXXXXXXNQRGFLYLAIVLTVSSGTYLGF 536
           RFGKNMRRAGFG CF+QG  Y IL               +  FLYLA+  TVS G YL F
Sbjct: 100 RFGKNMRRAGFGSCFLQGTAYCILALGALLNLIAFIVTKRHCFLYLAVAFTVSIGMYLSF 159

Query: 535 FRRQIRKQFNIGVHISSLISFYSFDFLAGIMVAIYAFFLFIPCCVV 398
           FR Q+R++FNI    SSL                  + LF PCC +
Sbjct: 160 FRTQMRQKFNIRGSDSSLDD--------------CIYHLFCPCCAL 191


>ref|XP_002889864.1| hypothetical protein ARALYDRAFT_471274 [Arabidopsis lyrata subsp.
           lyrata] gi|297335706|gb|EFH66123.1| hypothetical protein
           ARALYDRAFT_471274 [Arabidopsis lyrata subsp. lyrata]
          Length = 255

 Score =  137 bits (346), Expect = 3e-30
 Identities = 61/124 (49%), Positives = 82/124 (66%)
 Frame = -3

Query: 874 QTGGGFSSREKLDDDYESSGEFGGGVQRMWEGEILDCFEDRRIAVETACCPCYRFGKNMR 695
           QT G +   E  + +  +  ++GGGV R+WEG+++DCFEDR + +E+ACCPCYRFGKNM 
Sbjct: 58  QTQGKWRKLESSEGEDATEDDYGGGVLRLWEGDVMDCFEDRHLCIESACCPCYRFGKNMT 117

Query: 694 RAGFGPCFIQGGVYLILXXXXXXXXXXXXXXNQRGFLYLAIVLTVSSGTYLGFFRRQIRK 515
           R GFG CF+QG V++IL               +  FLYLAI   +  G+YLGFFR QIR+
Sbjct: 118 RTGFGSCFLQGAVHMILIAGFLFNVAAFAVTKRHCFLYLAIAFVLLIGSYLGFFRMQIRR 177

Query: 514 QFNI 503
           +FNI
Sbjct: 178 KFNI 181


>ref|NP_001242047.1| uncharacterized protein LOC100806189 [Glycine max]
           gi|255638959|gb|ACU19781.1| unknown [Glycine max]
          Length = 255

 Score =  137 bits (345), Expect = 3e-30
 Identities = 62/122 (50%), Positives = 80/122 (65%)
 Frame = -3

Query: 868 GGGFSSREKLDDDYESSGEFGGGVQRMWEGEILDCFEDRRIAVETACCPCYRFGKNMRRA 689
           G      E+ +++ E  GEFGG V RMWEGE+LDCF+D RIA+E+ CCPCYRFGKNM+RA
Sbjct: 49  GAEEEEEEEEEEEKEEGGEFGG-VLRMWEGEVLDCFDDHRIAIESTCCPCYRFGKNMKRA 107

Query: 688 GFGPCFIQGGVYLILXXXXXXXXXXXXXXNQRGFLYLAIVLTVSSGTYLGFFRRQIRKQF 509
           GFG C+IQ  +Y +L               +  +LYL +   VS G YLGFFR ++RK+F
Sbjct: 108 GFGSCYIQAAIYFLLAVGAFLNFIAFAVTRRHCYLYLTVAFVVSVGAYLGFFRTRLRKKF 167

Query: 508 NI 503
           NI
Sbjct: 168 NI 169


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