BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011259
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative ...   129   2e-28
ref|XP_002278412.1| PREDICTED: U6 snRNA-associated Sm-like prote...   126   2e-27
ref|XP_002311269.1| predicted protein [Populus trichocarpa] gi|1...   126   2e-27
ref|XP_002316168.1| predicted protein [Populus trichocarpa] gi|1...   126   2e-27
ref|XP_004140401.1| PREDICTED: U6 snRNA-associated Sm-like prote...   126   2e-27

>ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative [Ricinus communis]
           gi|223525355|gb|EEF27977.1| small nuclear
           ribonucleoprotein f, putative [Ricinus communis]
          Length = 91

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/66 (95%), Positives = 63/66 (95%)
 Frame = -3

Query: 200 MSGGGEKGLGATKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 21
           MSGGGEKG   TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 1   MSGGGEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 20  GQLKNK 3
           GQLKNK
Sbjct: 61  GQLKNK 66


>ref|XP_002278412.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6 [Vitis
           vinifera] gi|296084324|emb|CBI24712.3| unnamed protein
           product [Vitis vinifera]
          Length = 91

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/66 (93%), Positives = 62/66 (93%)
 Frame = -3

Query: 200 MSGGGEKGLGATKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 21
           MS GGEKG   TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 1   MSTGGEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 20  GQLKNK 3
           GQLKNK
Sbjct: 61  GQLKNK 66


>ref|XP_002311269.1| predicted protein [Populus trichocarpa] gi|118483023|gb|ABK93423.1|
           unknown [Populus trichocarpa]
           gi|222851089|gb|EEE88636.1| predicted protein [Populus
           trichocarpa]
          Length = 91

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/66 (93%), Positives = 62/66 (93%)
 Frame = -3

Query: 200 MSGGGEKGLGATKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 21
           MS GGEKG   TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 1   MSTGGEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 20  GQLKNK 3
           GQLKNK
Sbjct: 61  GQLKNK 66


>ref|XP_002316168.1| predicted protein [Populus trichocarpa] gi|118482915|gb|ABK93371.1|
           unknown [Populus trichocarpa]
           gi|222865208|gb|EEF02339.1| predicted protein [Populus
           trichocarpa]
          Length = 91

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/66 (93%), Positives = 62/66 (93%)
 Frame = -3

Query: 200 MSGGGEKGLGATKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 21
           MS GGEKG   TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 1   MSSGGEKGSTTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 20  GQLKNK 3
           GQLKNK
Sbjct: 61  GQLKNK 66


>ref|XP_004140401.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Cucumis
           sativus] gi|449498381|ref|XP_004160523.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm6-like [Cucumis
           sativus]
          Length = 92

 Score =  126 bits (316), Expect = 2e-27
 Identities = 62/66 (93%), Positives = 63/66 (95%)
 Frame = -3

Query: 200 MSGGGEKGLGATKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 21
           MS GGEKG  +TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 1   MSIGGEKGSASTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 20  GQLKNK 3
           GQLKNK
Sbjct: 61  GQLKNK 66