BLASTX nr result

ID: Coptis25_contig00011256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011256
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516035.1| conserved hypothetical protein [Ricinus comm...    71   1e-10
ref|XP_002303288.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_002284175.1| PREDICTED: uncharacterized protein LOC100267...    69   5e-10
ref|XP_003542098.1| PREDICTED: uncharacterized protein LOC100789...    67   2e-09
ref|XP_003546436.1| PREDICTED: uncharacterized protein LOC100816...    66   3e-09

>ref|XP_002516035.1| conserved hypothetical protein [Ricinus communis]
           gi|223544940|gb|EEF46455.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 483

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/47 (68%), Positives = 39/47 (82%)
 Frame = +2

Query: 299 NGLQIPVAVGVTLFQAISLYNGKAVIASKGDTDTNWKVHQLILYSAC 439
           N LQIPVA+GV+ +QA+SLY GK  IASKG+  TNW+VHQL+LY AC
Sbjct: 300 NLLQIPVALGVSSYQAVSLYKGKRRIASKGEAGTNWRVHQLVLYCAC 346


>ref|XP_002303288.1| predicted protein [Populus trichocarpa] gi|222840720|gb|EEE78267.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/47 (65%), Positives = 38/47 (80%)
 Frame = +2

Query: 299 NGLQIPVAVGVTLFQAISLYNGKAVIASKGDTDTNWKVHQLILYSAC 439
           N LQIPVAVGV+ ++A+SLY G   IASKG+T TNW+ HQL+LY AC
Sbjct: 245 NLLQIPVAVGVSSYEAVSLYKGTRKIASKGETGTNWRAHQLVLYCAC 291


>ref|XP_002284175.1| PREDICTED: uncharacterized protein LOC100267889 [Vitis vinifera]
           gi|296081886|emb|CBI20891.3| unnamed protein product
           [Vitis vinifera]
          Length = 478

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/47 (63%), Positives = 40/47 (85%)
 Frame = +2

Query: 299 NGLQIPVAVGVTLFQAISLYNGKAVIASKGDTDTNWKVHQLILYSAC 439
           N +QIPV+VGV+L++A+SLY G+ +IASKGD  TN++VHQLILY  C
Sbjct: 295 NFMQIPVSVGVSLYEAVSLYKGRRIIASKGDAGTNFRVHQLILYCFC 341


>ref|XP_003542098.1| PREDICTED: uncharacterized protein LOC100789733 [Glycine max]
          Length = 487

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/47 (61%), Positives = 36/47 (76%)
 Frame = +2

Query: 299 NGLQIPVAVGVTLFQAISLYNGKAVIASKGDTDTNWKVHQLILYSAC 439
           N LQ+PVA+G T +QA+ LY GK VIASKGD  T W+ HQL+LY +C
Sbjct: 304 NLLQVPVALGATSYQAVLLYTGKRVIASKGDQRTQWRAHQLVLYCSC 350


>ref|XP_003546436.1| PREDICTED: uncharacterized protein LOC100816528 [Glycine max]
          Length = 476

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/47 (61%), Positives = 36/47 (76%)
 Frame = +2

Query: 299 NGLQIPVAVGVTLFQAISLYNGKAVIASKGDTDTNWKVHQLILYSAC 439
           N LQ+PVA+G T +QA+ LY GK VIASKGD  T W+ HQLI+Y +C
Sbjct: 293 NLLQVPVALGATSYQAVLLYTGKRVIASKGDQRTQWRAHQLIMYCSC 339


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