BLASTX nr result

ID: Coptis25_contig00011252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011252
         (1280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315922.1| predicted protein [Populus trichocarpa] gi|2...   287   4e-75
ref|XP_002282799.1| PREDICTED: uncharacterized protein LOC100249...   283   7e-74
ref|XP_002311471.1| predicted protein [Populus trichocarpa] gi|2...   278   2e-72
gb|AFK38730.1| unknown [Medicago truncatula]                          272   2e-70
ref|XP_003555918.1| PREDICTED: uncharacterized protein LOC100781...   270   8e-70

>ref|XP_002315922.1| predicted protein [Populus trichocarpa] gi|222864962|gb|EEF02093.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  287 bits (735), Expect = 4e-75
 Identities = 141/199 (70%), Positives = 168/199 (84%), Gaps = 2/199 (1%)
 Frame = +3

Query: 381 MAMSISILAIVTSLSLIAFVLAIGAESRRSNSKVVPDQYDERTYCKYTSDASTVYGLSAF 560
           MA+S+SILA++TSL LIAFVLAIGAE RRS +KVVPDQYDERTYC Y +DASTVYGL+AF
Sbjct: 1   MAVSVSILAVITSLHLIAFVLAIGAERRRSTAKVVPDQYDERTYCVYDTDASTVYGLAAF 60

Query: 561 GLLLLSHALVNSVTRCLCFGKGLMDGSMKVI-TVIFFTLSWAGFLAAEACLLAGSARNAY 737
           GL+L+S  ++N VTRCLCFGKGL+ GS      +IFF  SW  FL AEACLLAGSARNAY
Sbjct: 61  GLILISQMILNGVTRCLCFGKGLVTGSCSTTCAIIFFIFSWLSFLGAEACLLAGSARNAY 120

Query: 738 HTKYRGWFGAQALSCATLRKGVFSAGAALTLISMISSILYYWAHSKADTGGWQKHRNEGL 917
           HTKYRG F    LSCATLRKGVF+AGAALTL+S+I SILYY+AHS+ADTGGW+KH+N G+
Sbjct: 121 HTKYRGLFNQGELSCATLRKGVFAAGAALTLLSLIGSILYYFAHSRADTGGWEKHQNVGV 180

Query: 918 GMTS-TFQEEQERKDFEKV 971
           GMTS ++ ++Q+  +FEKV
Sbjct: 181 GMTSASYPQQQQTSEFEKV 199


>ref|XP_002282799.1| PREDICTED: uncharacterized protein LOC100249231 [Vitis vinifera]
           gi|147792362|emb|CAN76984.1| hypothetical protein
           VITISV_027945 [Vitis vinifera]
           gi|297737776|emb|CBI26977.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  283 bits (724), Expect = 7e-74
 Identities = 133/197 (67%), Positives = 165/197 (83%)
 Frame = +3

Query: 381 MAMSISILAIVTSLSLIAFVLAIGAESRRSNSKVVPDQYDERTYCKYTSDASTVYGLSAF 560
           MA+S+S++AI+ SL LIAFVLA+G+E RRS +KVVPD+YDERTYC Y++DASTVYGL+AF
Sbjct: 1   MAVSVSLMAIIISLHLIAFVLAVGSERRRSTAKVVPDKYDERTYCVYSTDASTVYGLTAF 60

Query: 561 GLLLLSHALVNSVTRCLCFGKGLMDGSMKVITVIFFTLSWAGFLAAEACLLAGSARNAYH 740
           GLLL+S  ++N VT+CLCFG+GL+ G      V FF  SW  FL AEACLLAGSA+NAYH
Sbjct: 61  GLLLISQTVLNGVTKCLCFGRGLIGGGSTTCAVFFFIFSWVSFLGAEACLLAGSAKNAYH 120

Query: 741 TKYRGWFGAQALSCATLRKGVFSAGAALTLISMISSILYYWAHSKADTGGWQKHRNEGLG 920
           TKYRG FG Q LSCATLRKGVF+AGAAL+L+S++ SILYYWAHS+ADTGGW+KHR+EGLG
Sbjct: 121 TKYRGVFGGQDLSCATLRKGVFAAGAALSLLSLLGSILYYWAHSRADTGGWEKHRSEGLG 180

Query: 921 MTSTFQEEQERKDFEKV 971
           MT    ++Q+  +F K+
Sbjct: 181 MT----QQQQNNEFGKL 193


>ref|XP_002311471.1| predicted protein [Populus trichocarpa] gi|222851291|gb|EEE88838.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  278 bits (712), Expect = 2e-72
 Identities = 136/181 (75%), Positives = 155/181 (85%), Gaps = 1/181 (0%)
 Frame = +3

Query: 390 SISILAIVTSLSLIAFVLAIGAESRRSNSKVVPDQYDERTYCKYTSDASTVYGLSAFGLL 569
           SISI  I+TSL L+AFVLAIGAESRRS +KVVPDQYDE TYC Y +DASTVYGL+AFGLL
Sbjct: 1   SISISVIITSLHLVAFVLAIGAESRRSTAKVVPDQYDESTYCVYDTDASTVYGLAAFGLL 60

Query: 570 LLSHALVNSVTRCLCFGKGLMDGSMKVI-TVIFFTLSWAGFLAAEACLLAGSARNAYHTK 746
           L+S  +VN VTRCLCFGKGL+ GS      +IFF +SW  FL AEACLLAGSARNAYHTK
Sbjct: 61  LISQMIVNGVTRCLCFGKGLVTGSCSTTCAIIFFIVSWLSFLGAEACLLAGSARNAYHTK 120

Query: 747 YRGWFGAQALSCATLRKGVFSAGAALTLISMISSILYYWAHSKADTGGWQKHRNEGLGMT 926
           YRG+F    LSCATLR+GVF+AGAALTL+S+I SILYYWAHS+ADTGGW+KH+NEG+GMT
Sbjct: 121 YRGFFRQGDLSCATLRRGVFAAGAALTLLSLIGSILYYWAHSRADTGGWEKHQNEGVGMT 180

Query: 927 S 929
           S
Sbjct: 181 S 181


>gb|AFK38730.1| unknown [Medicago truncatula]
          Length = 193

 Score =  272 bits (695), Expect = 2e-70
 Identities = 129/183 (70%), Positives = 155/183 (84%)
 Frame = +3

Query: 381 MAMSISILAIVTSLSLIAFVLAIGAESRRSNSKVVPDQYDERTYCKYTSDASTVYGLSAF 560
           M +S++I+ ++ SL L+AFV AIGAE RRS +KVVPD+YDERT+C YT+DASTVYG++AF
Sbjct: 1   MGVSVTIIVLIISLHLLAFVFAIGAERRRSEAKVVPDEYDERTFCVYTTDASTVYGVAAF 60

Query: 561 GLLLLSHALVNSVTRCLCFGKGLMDGSMKVITVIFFTLSWAGFLAAEACLLAGSARNAYH 740
            LLLLS  ++N+VTRCLC GKGL+ G      VIFF LSW GFLAAEACLLAGSARNAYH
Sbjct: 61  SLLLLSQTVLNAVTRCLCCGKGLISGCSTTCAVIFFILSWTGFLAAEACLLAGSARNAYH 120

Query: 741 TKYRGWFGAQALSCATLRKGVFSAGAALTLISMISSILYYWAHSKADTGGWQKHRNEGLG 920
           TKYRG F A  LSCATLRKGVF+AGAALTL SM++SILYYWAH+KADTG W+KH+NEG+G
Sbjct: 121 TKYRGNFVAHDLSCATLRKGVFAAGAALTLFSMLASILYYWAHAKADTGFWEKHQNEGIG 180

Query: 921 MTS 929
           + +
Sbjct: 181 LAT 183


>ref|XP_003555918.1| PREDICTED: uncharacterized protein LOC100781729 [Glycine max]
          Length = 196

 Score =  270 bits (689), Expect = 8e-70
 Identities = 129/189 (68%), Positives = 154/189 (81%)
 Frame = +3

Query: 381 MAMSISILAIVTSLSLIAFVLAIGAESRRSNSKVVPDQYDERTYCKYTSDASTVYGLSAF 560
           MA+S++IL ++ +L LIAFV AIGAE RRS +KVVPD+YD+RT+C YT+DAS+VYGL+A 
Sbjct: 1   MAVSVTILVLIIALHLIAFVFAIGAERRRSEAKVVPDEYDDRTFCVYTTDASSVYGLAAV 60

Query: 561 GLLLLSHALVNSVTRCLCFGKGLMDGSMKVITVIFFTLSWAGFLAAEACLLAGSARNAYH 740
            LLLLSH ++N VTRCLC GKGL+ G      V  F LSW  FLAAEACLLAGSARNAYH
Sbjct: 61  ALLLLSHTVLNGVTRCLCCGKGLVSGCSATCAVFSFILSWISFLAAEACLLAGSARNAYH 120

Query: 741 TKYRGWFGAQALSCATLRKGVFSAGAALTLISMISSILYYWAHSKADTGGWQKHRNEGLG 920
           TKYRG+F    LSCATLRKGVF+AGAALTL+SM+++ILYYWAHSKADTG W+KHRNEGLG
Sbjct: 121 TKYRGYFVKHDLSCATLRKGVFAAGAALTLLSMLTAILYYWAHSKADTGFWEKHRNEGLG 180

Query: 921 MTSTFQEEQ 947
           + +     Q
Sbjct: 181 LATQHHHHQ 189


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