BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011251
         (1192 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD24601.1| putative non-LTR retroelement reverse transcripta...    46   1e-06

>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1319

 Score = 46.2 bits (108), Expect(2) = 1e-06
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = -2

Query: 807  NSWYKKIWAKYIHPTTSCLAWKLIQKAVPTDDRVKKAGVRLASRCHYCHHDEETLQHRL 631
            N  + K+W+    P      WK ++ A+  +DR++  G+R A  C +C  + ET+ H L
Sbjct: 992  NPLFDKVWSLETVPKIKVFMWKALKGALAVEDRLRSRGIRTADGCLFCKEEIETINHLL 1050



 Score = 33.5 bits (75), Expect(2) = 1e-06
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = -3

Query: 959  LAEVFSRLGIDLSTIQPPSGEVEDSRVWKPETDGLFTVKSDFENERKK 816
            L E+F    + L   Q P    EDS  W    +GL+TVKS +E   ++
Sbjct: 929  LTELFHEKDVQLIMHQRPLISSEDSYCWAGTNNGLYTVKSGYERSSRE 976