BLASTX nr result

ID: Coptis25_contig00011226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011226
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549542.1| PREDICTED: uncharacterized protein LOC100784...   165   4e-39
ref|XP_003519148.1| PREDICTED: uncharacterized protein LOC100783...   163   2e-38
ref|XP_003610315.1| hypothetical protein MTR_4g130830 [Medicago ...   161   6e-38
ref|XP_002278804.1| PREDICTED: uncharacterized protein LOC100263...   157   9e-37
emb|CAN82126.1| hypothetical protein VITISV_006558 [Vitis vinife...   157   9e-37

>ref|XP_003549542.1| PREDICTED: uncharacterized protein LOC100784843 [Glycine max]
          Length = 310

 Score =  165 bits (417), Expect = 4e-39
 Identities = 73/82 (89%), Positives = 81/82 (98%)
 Frame = +2

Query: 2   GDMRDA*PNARVRKNISLIRTFHGFKGDKQGTLEFLKLIFRALCLCWDRQTQDLHVDWVL 181
           GDMRDA P+ARVRKN+SLIRT+HGFKGDKQGTLEFLKLIFRALCLCWDRQTQDLH+DW+L
Sbjct: 201 GDMRDAWPSARVRKNVSLIRTYHGFKGDKQGTLEFLKLIFRALCLCWDRQTQDLHIDWIL 260

Query: 182 YRGRSLVPVSCEVVNDNIDGFY 247
           +RGRSL+PVSCEVVNDNIDG+Y
Sbjct: 261 FRGRSLIPVSCEVVNDNIDGYY 282


>ref|XP_003519148.1| PREDICTED: uncharacterized protein LOC100783799 [Glycine max]
          Length = 310

 Score =  163 bits (412), Expect = 2e-38
 Identities = 72/82 (87%), Positives = 80/82 (97%)
 Frame = +2

Query: 2   GDMRDA*PNARVRKNISLIRTFHGFKGDKQGTLEFLKLIFRALCLCWDRQTQDLHVDWVL 181
           GDMRDA P+ARVRKN+SLI T+HGFKGDKQGTLEFLKLIFRALCLCWDRQTQDLH+DW+L
Sbjct: 201 GDMRDAWPSARVRKNVSLIHTYHGFKGDKQGTLEFLKLIFRALCLCWDRQTQDLHIDWIL 260

Query: 182 YRGRSLVPVSCEVVNDNIDGFY 247
           +RGRSL+PVSCEVVNDNIDG+Y
Sbjct: 261 FRGRSLIPVSCEVVNDNIDGYY 282


>ref|XP_003610315.1| hypothetical protein MTR_4g130830 [Medicago truncatula]
           gi|355511370|gb|AES92512.1| hypothetical protein
           MTR_4g130830 [Medicago truncatula]
          Length = 167

 Score =  161 bits (407), Expect = 6e-38
 Identities = 72/82 (87%), Positives = 80/82 (97%)
 Frame = +2

Query: 2   GDMRDA*PNARVRKNISLIRTFHGFKGDKQGTLEFLKLIFRALCLCWDRQTQDLHVDWVL 181
           GDMRDA P+ARVRKN+SLIRT+HGFKGDKQGT+E+LKLIFRALCLCWDRQTQDLHVDW+L
Sbjct: 58  GDMRDAWPSARVRKNVSLIRTYHGFKGDKQGTVEYLKLIFRALCLCWDRQTQDLHVDWIL 117

Query: 182 YRGRSLVPVSCEVVNDNIDGFY 247
           +RGRSL+PVSCEVVNDNIDG Y
Sbjct: 118 FRGRSLIPVSCEVVNDNIDGCY 139


>ref|XP_002278804.1| PREDICTED: uncharacterized protein LOC100263811 [Vitis vinifera]
          Length = 310

 Score =  157 bits (397), Expect = 9e-37
 Identities = 71/82 (86%), Positives = 78/82 (95%)
 Frame = +2

Query: 2   GDMRDA*PNARVRKNISLIRTFHGFKGDKQGTLEFLKLIFRALCLCWDRQTQDLHVDWVL 181
           GDMRDA P+ARVRKN SLIRT+HGFKGDKQG +EFLKLIFRALCLCWDRQTQDLH+DWVL
Sbjct: 201 GDMRDAWPSARVRKNGSLIRTYHGFKGDKQGAVEFLKLIFRALCLCWDRQTQDLHIDWVL 260

Query: 182 YRGRSLVPVSCEVVNDNIDGFY 247
           +RGRSL+PV CEVVNDNIDG+Y
Sbjct: 261 FRGRSLIPVLCEVVNDNIDGYY 282


>emb|CAN82126.1| hypothetical protein VITISV_006558 [Vitis vinifera]
           gi|297743646|emb|CBI36529.3| unnamed protein product
           [Vitis vinifera]
          Length = 167

 Score =  157 bits (397), Expect = 9e-37
 Identities = 71/82 (86%), Positives = 78/82 (95%)
 Frame = +2

Query: 2   GDMRDA*PNARVRKNISLIRTFHGFKGDKQGTLEFLKLIFRALCLCWDRQTQDLHVDWVL 181
           GDMRDA P+ARVRKN SLIRT+HGFKGDKQG +EFLKLIFRALCLCWDRQTQDLH+DWVL
Sbjct: 58  GDMRDAWPSARVRKNGSLIRTYHGFKGDKQGAVEFLKLIFRALCLCWDRQTQDLHIDWVL 117

Query: 182 YRGRSLVPVSCEVVNDNIDGFY 247
           +RGRSL+PV CEVVNDNIDG+Y
Sbjct: 118 FRGRSLIPVLCEVVNDNIDGYY 139


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