BLASTX nr result

ID: Coptis25_contig00011223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011223
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30946.3| unnamed protein product [Vitis vinifera]              266   2e-69
ref|XP_002279654.1| PREDICTED: putative hydrolase C777.06c-like ...   266   2e-69
dbj|BAJ92126.1| predicted protein [Hordeum vulgare subsp. vulgare]    258   5e-67
gb|EEC69678.1| hypothetical protein OsI_39116 [Oryza sativa Indi...   256   1e-66
ref|XP_002443564.1| hypothetical protein SORBIDRAFT_08g021620 [S...   255   2e-66

>emb|CBI30946.3| unnamed protein product [Vitis vinifera]
          Length = 406

 Score =  266 bits (679), Expect = 2e-69
 Identities = 122/161 (75%), Positives = 142/161 (88%), Gaps = 6/161 (3%)
 Frame = -3

Query: 467 ASNISENGKCDS------SSLIFLGTGCSSAVPNVLCLIQPSNPPCQVCTQSLSLPPQQN 306
           + N++ENG C        SSLI LGTGCSS VPN +CLIQPS+PPC VC QSLSLPP++N
Sbjct: 84  SGNLAENGHCSDAAGEPRSSLILLGTGCSSVVPNAMCLIQPSDPPCNVCFQSLSLPPERN 143

Query: 305 PNYRCNTSLLIDYCNDDGQHKYILIDVGKTFREQVLRWFTYHQIPQVDSIILTHEHADAL 126
           PNYRCNTSLLIDYC ++G+HKYILIDVGKTFREQV+RWFT+++IPQVDSIILTHEHADA+
Sbjct: 144 PNYRCNTSLLIDYCQNNGEHKYILIDVGKTFREQVIRWFTFYKIPQVDSIILTHEHADAV 203

Query: 125 LGLDDVRAVQPFSPTNDIQPTQIYLTQYAMDSVAEKFPYLV 3
           LGLDD+RAVQPFSPTNDI PT +YL+QYAM+S+A KFPYLV
Sbjct: 204 LGLDDMRAVQPFSPTNDISPTPVYLSQYAMESIATKFPYLV 244


>ref|XP_002279654.1| PREDICTED: putative hydrolase C777.06c-like isoform 1 [Vitis
           vinifera]
          Length = 325

 Score =  266 bits (679), Expect = 2e-69
 Identities = 122/161 (75%), Positives = 142/161 (88%), Gaps = 6/161 (3%)
 Frame = -3

Query: 467 ASNISENGKCDS------SSLIFLGTGCSSAVPNVLCLIQPSNPPCQVCTQSLSLPPQQN 306
           + N++ENG C        SSLI LGTGCSS VPN +CLIQPS+PPC VC QSLSLPP++N
Sbjct: 3   SGNLAENGHCSDAAGEPRSSLILLGTGCSSVVPNAMCLIQPSDPPCNVCFQSLSLPPERN 62

Query: 305 PNYRCNTSLLIDYCNDDGQHKYILIDVGKTFREQVLRWFTYHQIPQVDSIILTHEHADAL 126
           PNYRCNTSLLIDYC ++G+HKYILIDVGKTFREQV+RWFT+++IPQVDSIILTHEHADA+
Sbjct: 63  PNYRCNTSLLIDYCQNNGEHKYILIDVGKTFREQVIRWFTFYKIPQVDSIILTHEHADAV 122

Query: 125 LGLDDVRAVQPFSPTNDIQPTQIYLTQYAMDSVAEKFPYLV 3
           LGLDD+RAVQPFSPTNDI PT +YL+QYAM+S+A KFPYLV
Sbjct: 123 LGLDDMRAVQPFSPTNDISPTPVYLSQYAMESIATKFPYLV 163


>dbj|BAJ92126.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 337

 Score =  258 bits (658), Expect = 5e-67
 Identities = 118/144 (81%), Positives = 132/144 (91%)
 Frame = -3

Query: 434 SSSLIFLGTGCSSAVPNVLCLIQPSNPPCQVCTQSLSLPPQQNPNYRCNTSLLIDYCNDD 255
           SSSL+FLGTGCSSAVPN  CLIQPS+PPC VC+QSLS+PP+ NPNYRCNTSLLIDYC D+
Sbjct: 32  SSSLVFLGTGCSSAVPNARCLIQPSDPPCAVCSQSLSVPPELNPNYRCNTSLLIDYCQDE 91

Query: 254 GQHKYILIDVGKTFREQVLRWFTYHQIPQVDSIILTHEHADALLGLDDVRAVQPFSPTND 75
           G HKYI+IDVGKTFREQVLRWF  H+IP VDSIILTHEHADA+LGLDDVR VQPFSP+ND
Sbjct: 92  GAHKYIIIDVGKTFREQVLRWFVCHKIPCVDSIILTHEHADAILGLDDVRVVQPFSPSND 151

Query: 74  IQPTQIYLTQYAMDSVAEKFPYLV 3
           I PT IYL+QYAMDS+++KFPYLV
Sbjct: 152 IDPTPIYLSQYAMDSISQKFPYLV 175


>gb|EEC69678.1| hypothetical protein OsI_39116 [Oryza sativa Indica Group]
          Length = 337

 Score =  256 bits (654), Expect = 1e-66
 Identities = 118/144 (81%), Positives = 132/144 (91%)
 Frame = -3

Query: 434 SSSLIFLGTGCSSAVPNVLCLIQPSNPPCQVCTQSLSLPPQQNPNYRCNTSLLIDYCNDD 255
           SSSL+FLGTGCSSAVPN  CLIQP +PPC VC+QSLS+PP+ NPNYRCNTSLLIDYC D+
Sbjct: 26  SSSLVFLGTGCSSAVPNARCLIQPPDPPCAVCSQSLSVPPELNPNYRCNTSLLIDYCQDE 85

Query: 254 GQHKYILIDVGKTFREQVLRWFTYHQIPQVDSIILTHEHADALLGLDDVRAVQPFSPTND 75
             HKYILIDVGKTFREQVLRWF +H+IP VDSIILTHEHADA+LGLDDVR VQPFSPTND
Sbjct: 86  VAHKYILIDVGKTFREQVLRWFIHHKIPGVDSIILTHEHADAILGLDDVRIVQPFSPTND 145

Query: 74  IQPTQIYLTQYAMDSVAEKFPYLV 3
           I+PT IYL+Q+AMDS+A+KFPYLV
Sbjct: 146 IEPTPIYLSQFAMDSIAQKFPYLV 169


>ref|XP_002443564.1| hypothetical protein SORBIDRAFT_08g021620 [Sorghum bicolor]
           gi|241944257|gb|EES17402.1| hypothetical protein
           SORBIDRAFT_08g021620 [Sorghum bicolor]
          Length = 326

 Score =  255 bits (652), Expect = 2e-66
 Identities = 116/144 (80%), Positives = 131/144 (90%)
 Frame = -3

Query: 434 SSSLIFLGTGCSSAVPNVLCLIQPSNPPCQVCTQSLSLPPQQNPNYRCNTSLLIDYCNDD 255
           SSSL+FLGTGCSSAVPN  CLIQP +PPC VC+QSLS+PP+ NPNYRCNTSLLIDYC D+
Sbjct: 21  SSSLVFLGTGCSSAVPNARCLIQPPDPPCSVCSQSLSVPPELNPNYRCNTSLLIDYCQDE 80

Query: 254 GQHKYILIDVGKTFREQVLRWFTYHQIPQVDSIILTHEHADALLGLDDVRAVQPFSPTND 75
           G HKYI+IDVGKTFREQVLRWF  H+IP VDSI+LTHEHADA+LGLDDVR VQPFSPTND
Sbjct: 81  GAHKYIIIDVGKTFREQVLRWFVRHKIPCVDSILLTHEHADAILGLDDVRVVQPFSPTND 140

Query: 74  IQPTQIYLTQYAMDSVAEKFPYLV 3
           I PT IYL+Q+AMDS+++KFPYLV
Sbjct: 141 IDPTPIYLSQFAMDSISQKFPYLV 164


Top