BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011221
         (1175 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi...   266   6e-69
emb|CBI21323.3| unnamed protein product [Vitis vinifera]              253   7e-65
ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containi...   252   1e-64
ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containi...   243   5e-62
ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containi...   240   6e-61

>ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
            [Vitis vinifera]
          Length = 660

 Score =  266 bits (681), Expect = 6e-69
 Identities = 130/246 (52%), Positives = 176/246 (71%)
 Frame = +1

Query: 1    AYAGIQEMKKKGFGPDVFSYNSVMEACCREDLLPPAKRLWDEMFANGCCGNLKTYNILIR 180
            AY  +QEMKK G  PD+ SYN +MEACCREDLL PAKRLWDEMFA+G   NLKTYNILI+
Sbjct: 417  AYGVLQEMKKNGLDPDISSYNCLMEACCREDLLRPAKRLWDEMFASGYGVNLKTYNILIQ 476

Query: 181  KLSKMGEVEEARCLFNHMLENGLAPDIVTYTSLIKGLCQEAKVGAACEIFKMSVEQDITL 360
            K S++G+++EA+ LF HMLE G+ PD  TYTSL++GLCQE K  +A E+FK SVEQD+ L
Sbjct: 477  KFSEIGQIQEAQWLFQHMLEKGVNPDATTYTSLLEGLCQEKKFESAFEVFKKSVEQDVML 536

Query: 361  AQLILTALVHSLCKEGNSLAASRLIRGLPPDIIDHECHVVLLKGLSDSGDTGMALEHIQW 540
            AQ IL   +  +CKEGN L AS+L+ GL  D+   + HV+ LK L+D+ +   A+EHI+W
Sbjct: 537  AQTILNTFILYICKEGNFLFASKLLCGLTYDVGHSDSHVIFLKYLADASEISTAIEHIKW 596

Query: 541  VGDNSPSILKAVSAELVTSLSSSLKPGPVVQLIRVMMGKGLVSYDDTWMDICDEISLTRC 720
            VGD  PS+L  +S EL   L+SS KP P++Q++  M  K  + Y+D+W ++ +++     
Sbjct: 597  VGDTLPSMLPTISTELFALLASSSKPEPILQMLLAMQEKSPLPYNDSWKELSNQLF---- 652

Query: 721  *SGHTL 738
             +GH+L
Sbjct: 653  -TGHSL 657


>emb|CBI21323.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  253 bits (646), Expect = 7e-65
 Identities = 123/216 (56%), Positives = 159/216 (73%)
 Frame = +1

Query: 1    AYAGIQEMKKKGFGPDVFSYNSVMEACCREDLLPPAKRLWDEMFANGCCGNLKTYNILIR 180
            AY  +QEMKK G  PD+ SYN +MEACCREDLL PAKRLWDEMFA+G   NLKTYNILI+
Sbjct: 417  AYGVLQEMKKNGLDPDISSYNCLMEACCREDLLRPAKRLWDEMFASGYGVNLKTYNILIQ 476

Query: 181  KLSKMGEVEEARCLFNHMLENGLAPDIVTYTSLIKGLCQEAKVGAACEIFKMSVEQDITL 360
            K S++G+++EA+ LF HMLE G+ PD  TYTSL++GLCQE K  +A E+FK SVEQD+ L
Sbjct: 477  KFSEIGQIQEAQWLFQHMLEKGVNPDATTYTSLLEGLCQEKKFESAFEVFKKSVEQDVML 536

Query: 361  AQLILTALVHSLCKEGNSLAASRLIRGLPPDIIDHECHVVLLKGLSDSGDTGMALEHIQW 540
            AQ IL   +  +CKEGN L AS+L+ GL  D+   + HV+ LK L+D+ +   A+EHI+W
Sbjct: 537  AQTILNTFILYICKEGNFLFASKLLCGLTYDVGHSDSHVIFLKYLADASEISTAIEHIKW 596

Query: 541  VGDNSPSILKAVSAELVTSLSSSLKPGPVVQLIRVM 648
            VGD  PS+L  +S EL   L+SS KP P++Q++  M
Sbjct: 597  VGDTLPSMLPTISTELFALLASSSKPEPILQMLLAM 632


>ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080-like
            [Cucumis sativus]
          Length = 640

 Score =  252 bits (644), Expect = 1e-64
 Identities = 116/216 (53%), Positives = 161/216 (74%)
 Frame = +1

Query: 1    AYAGIQEMKKKGFGPDVFSYNSVMEACCREDLLPPAKRLWDEMFANGCCGNLKTYNILIR 180
            AY  +QEMKK GF PDV  YNSV+EACCREDLL PA++LWDEMFA GCCGNLKTY+ILI+
Sbjct: 417  AYGVLQEMKKNGFDPDVSFYNSVLEACCREDLLRPARKLWDEMFAGGCCGNLKTYSILIQ 476

Query: 181  KLSKMGEVEEARCLFNHMLENGLAPDIVTYTSLIKGLCQEAKVGAACEIFKMSVEQDITL 360
            K SK  ++EEA  L++HML   + PDI  YTSL++GLCQ++++ AA E+F  SVEQD+ L
Sbjct: 477  KFSKSNQIEEALVLYSHMLGKNVEPDIAIYTSLLQGLCQDSQLEAAFEVFSKSVEQDVNL 536

Query: 361  AQLILTALVHSLCKEGNSLAASRLIRGLPPDIIDHECHVVLLKGLSDSGDTGMALEHIQW 540
            A  +L+  +  LCK G+ LAAS+L+RGL  D+   + HV LLKG +D+G+  +A +H++W
Sbjct: 537  AATLLSTFILCLCKVGHFLAASKLLRGLASDVAHPDSHVTLLKGFADAGEVSLAKQHVEW 596

Query: 541  VGDNSPSILKAVSAELVTSLSSSLKPGPVVQLIRVM 648
            V + SPS+L  +S EL+  L SS K  P++++++ +
Sbjct: 597  VQETSPSMLSVISTELLAFLPSSPKADPILEILQTV 632


>ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080-like
            [Glycine max]
          Length = 647

 Score =  243 bits (621), Expect = 5e-62
 Identities = 114/213 (53%), Positives = 166/213 (77%)
 Frame = +1

Query: 4    YAGIQEMKKKGFGPDVFSYNSVMEACCREDLLPPAKRLWDEMFANGCCGNLKTYNILIRK 183
            Y+ +QEMKKKGF P+V SYN +MEACC+EDLL PA++LWDEMF++GCCGNLKTYNILI+K
Sbjct: 414  YSVLQEMKKKGFRPNVTSYNYIMEACCKEDLLRPARKLWDEMFSSGCCGNLKTYNILIQK 473

Query: 184  LSKMGEVEEARCLFNHMLENGLAPDIVTYTSLIKGLCQEAKVGAACEIFKMSVEQDITLA 363
             S++G+ EEA  LF HML+ G+ PD+ +YT L++GLCQE K+ AA E++  SV+QDI LA
Sbjct: 474  FSEVGQAEEAHMLFYHMLDKGVEPDVTSYTLLLEGLCQEDKLEAAFELYNKSVKQDIILA 533

Query: 364  QLILTALVHSLCKEGNSLAASRLIRGLPPDIIDHECHVVLLKGLSDSGDTGMALEHIQWV 543
            + IL++ + SLC++G+ +AAS+L+  L  DI   E HV+LL+ L+++ +  +A+EH++WV
Sbjct: 534  RDILSSFISSLCRKGHLMAASKLLCSLNHDIGCAESHVILLESLANAQEIPIAIEHLKWV 593

Query: 544  GDNSPSILKAVSAELVTSLSSSLKPGPVVQLIR 642
             + SPSIL+ +   L+ SLSS+  P P++Q ++
Sbjct: 594  QEKSPSILQDICTGLLASLSSATCPEPILQFLK 626


>ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080-like
            [Cucumis sativus]
          Length = 635

 Score =  240 bits (612), Expect = 6e-61
 Identities = 114/216 (52%), Positives = 159/216 (73%)
 Frame = +1

Query: 1    AYAGIQEMKKKGFGPDVFSYNSVMEACCREDLLPPAKRLWDEMFANGCCGNLKTYNILIR 180
            AY  +QEMKK GF PDV  YNSV+EACCREDLL PA++LWDEMFA GCCGNLKTY+ILI+
Sbjct: 417  AYGVLQEMKKNGFDPDVSFYNSVLEACCREDLLRPARKLWDEMFAGGCCGNLKTYSILIQ 476

Query: 181  KLSKMGEVEEARCLFNHMLENGLAPDIVTYTSLIKGLCQEAKVGAACEIFKMSVEQDITL 360
            K SK  ++EEA  L++HML   + PDI  YTSL++GLCQ++++ AA E+F  SVEQD+ L
Sbjct: 477  KFSKSNQIEEALVLYSHMLGKNVEPDIAIYTSLLQGLCQDSQLEAAFEVFSKSVEQDVNL 536

Query: 361  AQLILTALVHSLCKEGNSLAASRLIRGLPPDIIDHECHVVLLKGLSDSGDTGMALEHIQW 540
            A  +L+  +  LC   + LAAS+L+RGL  D+   + HV LLKG +D+G+  +A +H++W
Sbjct: 537  AATLLSTFI--LC---HFLAASKLLRGLASDVAHPDSHVTLLKGFADAGEVSLAKQHVEW 591

Query: 541  VGDNSPSILKAVSAELVTSLSSSLKPGPVVQLIRVM 648
            V + SPS+L  +S EL+  L SS K  P++++++ +
Sbjct: 592  VQETSPSMLSVISTELLAFLPSSPKADPILEILQTV 627