BLASTX nr result

ID: Coptis25_contig00011211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011211
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275793.1| PREDICTED: ganglioside-induced differentiati...   139   2e-31
ref|XP_002531499.1| conserved hypothetical protein [Ricinus comm...   137   7e-31
ref|XP_002307993.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
gb|ABK94010.1| unknown [Populus trichocarpa]                          134   1e-29
ref|NP_001242373.1| uncharacterized protein LOC100810365 [Glycin...   132   4e-29

>ref|XP_002275793.1| PREDICTED: ganglioside-induced differentiation-associated-protein 2
           [Vitis vinifera] gi|297739900|emb|CBI30082.3| unnamed
           protein product [Vitis vinifera]
          Length = 247

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/78 (83%), Positives = 70/78 (89%)
 Frame = +3

Query: 39  QAFLVQGLDKSGNRILRIVGKYFPAPIISAERLKKYVFHKIFSELQEGPFCIVYIHSTVQ 218
           Q   +QG DKSGNRILRIVGKY PAP++S ERLKKYVFHKI SEL EGPFCIVY+HSTVQ
Sbjct: 58  QFIRIQGSDKSGNRILRIVGKYLPAPVVSGERLKKYVFHKIVSELPEGPFCIVYMHSTVQ 117

Query: 219 KEDNSPGMTILRWIYEEL 272
           KEDNSPG+TILRWIYEEL
Sbjct: 118 KEDNSPGLTILRWIYEEL 135


>ref|XP_002531499.1| conserved hypothetical protein [Ricinus communis]
           gi|223528886|gb|EEF30886.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/78 (80%), Positives = 71/78 (91%)
 Frame = +3

Query: 39  QAFLVQGLDKSGNRILRIVGKYFPAPIISAERLKKYVFHKIFSELQEGPFCIVYIHSTVQ 218
           Q F +QG DKSGNRI R++GKYFPA +ISAERLKKY+FHK+ SEL EGPFCIVY+HSTVQ
Sbjct: 72  QFFRLQGSDKSGNRIFRVIGKYFPAQVISAERLKKYIFHKMCSELPEGPFCIVYMHSTVQ 131

Query: 219 KEDNSPGMTILRWIYEEL 272
           KEDNSPG+TILRWIYEEL
Sbjct: 132 KEDNSPGITILRWIYEEL 149


>ref|XP_002307993.1| predicted protein [Populus trichocarpa] gi|222853969|gb|EEE91516.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score =  135 bits (340), Expect = 3e-30
 Identities = 62/78 (79%), Positives = 69/78 (88%)
 Frame = +3

Query: 39  QAFLVQGLDKSGNRILRIVGKYFPAPIISAERLKKYVFHKIFSELQEGPFCIVYIHSTVQ 218
           Q F +QG DKSGNR+ RIVGKYFPA ++S ERLKKY+FHKI SEL EGP CIVY+HSTVQ
Sbjct: 63  QFFTLQGSDKSGNRVFRIVGKYFPAQVVSGERLKKYIFHKICSELPEGPLCIVYMHSTVQ 122

Query: 219 KEDNSPGMTILRWIYEEL 272
           KEDNSPG+TILRWIYEEL
Sbjct: 123 KEDNSPGVTILRWIYEEL 140


>gb|ABK94010.1| unknown [Populus trichocarpa]
          Length = 252

 Score =  134 bits (336), Expect = 1e-29
 Identities = 62/78 (79%), Positives = 68/78 (87%)
 Frame = +3

Query: 39  QAFLVQGLDKSGNRILRIVGKYFPAPIISAERLKKYVFHKIFSELQEGPFCIVYIHSTVQ 218
           Q F +QG DKSGNR+ RIVGKYFPA ++S ERLKKY+FHKI SEL EGP CIVY HSTVQ
Sbjct: 63  QFFTLQGSDKSGNRVFRIVGKYFPAQVVSGERLKKYIFHKICSELPEGPLCIVYKHSTVQ 122

Query: 219 KEDNSPGMTILRWIYEEL 272
           KEDNSPG+TILRWIYEEL
Sbjct: 123 KEDNSPGVTILRWIYEEL 140


>ref|NP_001242373.1| uncharacterized protein LOC100810365 [Glycine max]
           gi|255634536|gb|ACU17631.1| unknown [Glycine max]
          Length = 246

 Score =  132 bits (331), Expect = 4e-29
 Identities = 62/78 (79%), Positives = 69/78 (88%)
 Frame = +3

Query: 39  QAFLVQGLDKSGNRILRIVGKYFPAPIISAERLKKYVFHKIFSELQEGPFCIVYIHSTVQ 218
           Q   +QG DK+ NRILRIVGKYFPA ++SAERLK+YVFHKI SEL EGPFCIVY+HSTVQ
Sbjct: 57  QFLRLQGSDKNSNRILRIVGKYFPATVVSAERLKRYVFHKICSELPEGPFCIVYMHSTVQ 116

Query: 219 KEDNSPGMTILRWIYEEL 272
           KEDNSPG+TIL WIYEEL
Sbjct: 117 KEDNSPGITILSWIYEEL 134


Top