BLASTX nr result

ID: Coptis25_contig00011209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011209
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD39604.1|AC007454_3 F23M19.3 [Arabidopsis thaliana]               58   9e-07
ref|NP_174692.1| uncharacterized protein [Arabidopsis thaliana] ...    58   9e-07
ref|XP_002891095.1| hypothetical protein ARALYDRAFT_473586 [Arab...    58   9e-07
emb|CBI21643.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002534019.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>gb|AAD39604.1|AC007454_3 F23M19.3 [Arabidopsis thaliana]
          Length = 609

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -3

Query: 360 KEELTVTQIKAEMEKTLQWLVPIATNTTK 274
           KEELTV QIKAEMEKTLQWLVP+ATNTTK
Sbjct: 388 KEELTVPQIKAEMEKTLQWLVPVATNTTK 416


>ref|NP_174692.1| uncharacterized protein [Arabidopsis thaliana]
           gi|37202044|gb|AAQ89637.1| At1g34320 [Arabidopsis
           thaliana] gi|51970944|dbj|BAD44164.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|51971088|dbj|BAD44236.1| hypothetical protein
           [Arabidopsis thaliana] gi|332193576|gb|AEE31697.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 657

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -3

Query: 360 KEELTVTQIKAEMEKTLQWLVPIATNTTK 274
           KEELTV QIKAEMEKTLQWLVP+ATNTTK
Sbjct: 436 KEELTVPQIKAEMEKTLQWLVPVATNTTK 464


>ref|XP_002891095.1| hypothetical protein ARALYDRAFT_473586 [Arabidopsis lyrata subsp.
           lyrata] gi|297336937|gb|EFH67354.1| hypothetical protein
           ARALYDRAFT_473586 [Arabidopsis lyrata subsp. lyrata]
          Length = 662

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -3

Query: 360 KEELTVTQIKAEMEKTLQWLVPIATNTTK 274
           KEELTV QIKAEMEKTLQWLVP+ATNTTK
Sbjct: 441 KEELTVPQIKAEMEKTLQWLVPVATNTTK 469


>emb|CBI21643.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = -3

Query: 360 KEELTVTQIKAEMEKTLQWLVPIATNTTK 274
           KEELT+T+IKAEMEKTLQWLVPIATNT K
Sbjct: 358 KEELTITEIKAEMEKTLQWLVPIATNTAK 386


>ref|XP_002534019.1| conserved hypothetical protein [Ricinus communis]
           gi|223525970|gb|EEF28360.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 637

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -3

Query: 360 KEELTVTQIKAEMEKTLQWLVPIATNTTK 274
           KEELTV QIKAEME+TLQWLVPIATNTTK
Sbjct: 423 KEELTVAQIKAEMEQTLQWLVPIATNTTK 451


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