BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011207
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236730.1| uncharacterized protein LOC100500095 [Glycin...    65   6e-09
ref|XP_002532875.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_002309971.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
gb|AFK42853.1| unknown [Medicago truncatula]                           62   5e-08
ref|XP_003614099.1| Mediator of RNA polymerase II transcription ...    62   5e-08

>ref|NP_001236730.1| uncharacterized protein LOC100500095 [Glycine max]
           gi|255629097|gb|ACU14893.1| unknown [Glycine max]
          Length = 217

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/47 (74%), Positives = 37/47 (78%)
 Frame = -3

Query: 380 AAVSSFCEYLAPLLHLSKPGVSAGVVPTXXXXXXXASLMSDRGGKNL 240
           +AVSSFCEYLAPLLHLSKPG+S GVVPT       ASLMSD GG NL
Sbjct: 173 SAVSSFCEYLAPLLHLSKPGISTGVVPT--AAAAAASLMSDGGGTNL 217


>ref|XP_002532875.1| conserved hypothetical protein [Ricinus communis]
           gi|223527360|gb|EEF29504.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 217

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/47 (76%), Positives = 36/47 (76%)
 Frame = -3

Query: 380 AAVSSFCEYLAPLLHLSKPGVSAGVVPTXXXXXXXASLMSDRGGKNL 240
           AAVSSFCEYLAPLLHLSKPGVS GVVPT       ASLMSD GG  L
Sbjct: 173 AAVSSFCEYLAPLLHLSKPGVSTGVVPT--AAAAAASLMSDGGGTTL 217


>ref|XP_002309971.1| predicted protein [Populus trichocarpa] gi|222852874|gb|EEE90421.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/47 (76%), Positives = 36/47 (76%)
 Frame = -3

Query: 380 AAVSSFCEYLAPLLHLSKPGVSAGVVPTXXXXXXXASLMSDRGGKNL 240
           AAVSSFCEYLAPLLHLSKPGVS GVVPT       ASLMSD GG  L
Sbjct: 172 AAVSSFCEYLAPLLHLSKPGVSTGVVPT--AAAAAASLMSDGGGTTL 216


>gb|AFK42853.1| unknown [Medicago truncatula]
          Length = 217

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/47 (74%), Positives = 35/47 (74%)
 Frame = -3

Query: 380 AAVSSFCEYLAPLLHLSKPGVSAGVVPTXXXXXXXASLMSDRGGKNL 240
           AAV SFCEYLAPLLHLSKPGVS GVVPT       ASLMSD GG  L
Sbjct: 173 AAVQSFCEYLAPLLHLSKPGVSTGVVPT--AAAAAASLMSDGGGTPL 217


>ref|XP_003614099.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355515434|gb|AES97057.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 225

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/47 (74%), Positives = 35/47 (74%)
 Frame = -3

Query: 380 AAVSSFCEYLAPLLHLSKPGVSAGVVPTXXXXXXXASLMSDRGGKNL 240
           AAV SFCEYLAPLLHLSKPGVS GVVPT       ASLMSD GG  L
Sbjct: 181 AAVQSFCEYLAPLLHLSKPGVSTGVVPT--AAAAAASLMSDGGGTPL 225