BLASTX nr result

ID: Coptis25_contig00011206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011206
         (1152 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25124.3| unnamed protein product [Vitis vinifera]              264   3e-68
ref|XP_002275857.1| PREDICTED: dnaJ homolog subfamily C member 1...   264   3e-68
ref|XP_004163417.1| PREDICTED: LOW QUALITY PROTEIN: dnaJ homolog...   243   5e-62
ref|XP_004144862.1| PREDICTED: dnaJ homolog subfamily C member 1...   243   5e-62
ref|XP_002522773.1| Pre-mRNA-splicing factor cwc23, putative [Ri...   241   2e-61

>emb|CBI25124.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score =  264 bits (675), Expect = 3e-68
 Identities = 149/307 (48%), Positives = 196/307 (63%)
 Frame = +2

Query: 143  MEIEIDHYEILGLPSGEEGSKLTLDEIKTAYKKKSLKIHPDKNLNNPNAATEFKTLSASY 322
            M++ +DHY +LGLPSGEEG+KL+  EI  AY+ K+L++HPDK  ++P A   F+ L  SY
Sbjct: 56   MDMNVDHYNVLGLPSGEEGAKLSEKEISKAYRVKALELHPDKRPDDPQAHANFQKLKTSY 115

Query: 323  KILKDEAARKLYDDLLXXXXXXXXXXXXYEREKQQREAAYGVKRRTMMNDLEERERASFA 502
            +ILKDE ARKL+DDLL             +RE+  R+A Y VKRR M++DLEERERA+ A
Sbjct: 116  EILKDEKARKLFDDLL-----------RVKREQFHRQAQYDVKRRRMVSDLEERERAANA 164

Query: 503  VDPVGKXXXXXXXXXXXXXXXXXXXXXMHAKKSGMAGRKRSEPEGEKRXXXXXXXLDGEK 682
             DP  K                     MHA K     RK +    ++        L+ EK
Sbjct: 165  PDPASKAREEEERITKKLKEEIARIRAMHANKGASGSRKEAPGTRKESVADGGGGLNKEK 224

Query: 683  VLKVSWEGNEDAYSAERLKELFKEFGEVEDVVIRSNKKRRTRSALVVMANKDSAVFAMGS 862
            VLKVSWE   + Y+AE L+E+F +FGEVEDVV++S++K+   SALVVMA+K++AV A G+
Sbjct: 225  VLKVSWEKGGEDYTAEGLREVFAKFGEVEDVVLKSSRKK--GSALVVMASKEAAVAATGN 282

Query: 863  VCGDLKNPLLVMPLNKAAPVEGSSVFPPRHVEPEPYIPVANNLVGASYQAKEASILDKLM 1042
            VCG + NPLLV+PL  A  +E    FPPR +EPEP    ++NLVGA YQ+ E S+L KL 
Sbjct: 283  VCGHISNPLLVLPLEPAVVME----FPPRSMEPEP----SSNLVGAGYQSFEESVLKKLQ 334

Query: 1043 KAAEKQK 1063
            KAAEKQK
Sbjct: 335  KAAEKQK 341


>ref|XP_002275857.1| PREDICTED: dnaJ homolog subfamily C member 17-like [Vitis vinifera]
          Length = 286

 Score =  264 bits (675), Expect = 3e-68
 Identities = 149/307 (48%), Positives = 196/307 (63%)
 Frame = +2

Query: 143  MEIEIDHYEILGLPSGEEGSKLTLDEIKTAYKKKSLKIHPDKNLNNPNAATEFKTLSASY 322
            M++ +DHY +LGLPSGEEG+KL+  EI  AY+ K+L++HPDK  ++P A   F+ L  SY
Sbjct: 1    MDMNVDHYNVLGLPSGEEGAKLSEKEISKAYRVKALELHPDKRPDDPQAHANFQKLKTSY 60

Query: 323  KILKDEAARKLYDDLLXXXXXXXXXXXXYEREKQQREAAYGVKRRTMMNDLEERERASFA 502
            +ILKDE ARKL+DDLL             +RE+  R+A Y VKRR M++DLEERERA+ A
Sbjct: 61   EILKDEKARKLFDDLL-----------RVKREQFHRQAQYDVKRRRMVSDLEERERAANA 109

Query: 503  VDPVGKXXXXXXXXXXXXXXXXXXXXXMHAKKSGMAGRKRSEPEGEKRXXXXXXXLDGEK 682
             DP  K                     MHA K     RK +    ++        L+ EK
Sbjct: 110  PDPASKAREEEERITKKLKEEIARIRAMHANKGASGSRKEAPGTRKESVADGGGGLNKEK 169

Query: 683  VLKVSWEGNEDAYSAERLKELFKEFGEVEDVVIRSNKKRRTRSALVVMANKDSAVFAMGS 862
            VLKVSWE   + Y+AE L+E+F +FGEVEDVV++S++K+   SALVVMA+K++AV A G+
Sbjct: 170  VLKVSWEKGGEDYTAEGLREVFAKFGEVEDVVLKSSRKK--GSALVVMASKEAAVAATGN 227

Query: 863  VCGDLKNPLLVMPLNKAAPVEGSSVFPPRHVEPEPYIPVANNLVGASYQAKEASILDKLM 1042
            VCG + NPLLV+PL  A  +E    FPPR +EPEP    ++NLVGA YQ+ E S+L KL 
Sbjct: 228  VCGHISNPLLVLPLEPAVVME----FPPRSMEPEP----SSNLVGAGYQSFEESVLKKLQ 279

Query: 1043 KAAEKQK 1063
            KAAEKQK
Sbjct: 280  KAAEKQK 286


>ref|XP_004163417.1| PREDICTED: LOW QUALITY PROTEIN: dnaJ homolog subfamily C member
            17-like [Cucumis sativus]
          Length = 290

 Score =  243 bits (621), Expect = 5e-62
 Identities = 144/308 (46%), Positives = 190/308 (61%), Gaps = 3/308 (0%)
 Frame = +2

Query: 149  IEIDHYEILGLPSGEEGSKLTLDEIKTAYKKKSLKIHPDKNLNNPNAATEFKTLSASYKI 328
            +++DHY ILGLPSGE+G+KLT  EI  AY+ K+L++HPDK  ++PNA   F+TL +SY+I
Sbjct: 1    MDVDHYAILGLPSGEQGAKLTEKEISKAYRAKALELHPDKRPDDPNAHANFQTLKSSYEI 60

Query: 329  LKDEAARKLYDDLLXXXXXXXXXXXXYEREKQQREAAYGVKRRTMMNDLEERERASFAVD 508
            LKDE ARKL+DDLL             +RE+ +R++    KR+ MM DLE RER++FA D
Sbjct: 61   LKDEKARKLFDDLL-----------RVKREQHRRQSERDSKRQKMMTDLEARERSAFAPD 109

Query: 509  PVGKXXXXXXXXXXXXXXXXXXXXXMHAKKSG---MAGRKRSEPEGEKRXXXXXXXLDGE 679
            P  K                     MHAKK        +K +   G+K        +D E
Sbjct: 110  PAAKELEEEEXIARKLKEEIARIRAMHAKKGAPTTFPPKKETGGVGKKSDGDAGPTMDKE 169

Query: 680  KVLKVSWEGNEDAYSAERLKELFKEFGEVEDVVIRSNKKRRTRSALVVMANKDSAVFAMG 859
            ++LKVSWE   + Y+AE+L+E+F +FGEVEDVVIR NKK+   SA++VM++KD+AV +  
Sbjct: 170  RMLKVSWEKIGEDYTAEKLREMFSKFGEVEDVVIRHNKKK--GSAVIVMSSKDAAVASTR 227

Query: 860  SVCGDLKNPLLVMPLNKAAPVEGSSVFPPRHVEPEPYIPVANNLVGASYQAKEASILDKL 1039
            +V GDL NPLLV+PL   + VE  S       E  P     +NLVGA YQA E SIL KL
Sbjct: 228  AVLGDLSNPLLVLPLQPVSSVEMPS------AERSPEHNRLDNLVGAGYQAFEDSILKKL 281

Query: 1040 MKAAEKQK 1063
             KA EKQK
Sbjct: 282  QKAGEKQK 289


>ref|XP_004144862.1| PREDICTED: dnaJ homolog subfamily C member 17-like [Cucumis sativus]
          Length = 290

 Score =  243 bits (621), Expect = 5e-62
 Identities = 143/308 (46%), Positives = 189/308 (61%), Gaps = 3/308 (0%)
 Frame = +2

Query: 149  IEIDHYEILGLPSGEEGSKLTLDEIKTAYKKKSLKIHPDKNLNNPNAATEFKTLSASYKI 328
            +++DHY ILGLPSGE+G+KLT  EI  AY+ K+L++HPDK  ++PNA   F+TL +SY+I
Sbjct: 1    MDVDHYAILGLPSGEQGAKLTEKEISKAYRAKALELHPDKRPDDPNAHANFQTLKSSYEI 60

Query: 329  LKDEAARKLYDDLLXXXXXXXXXXXXYEREKQQREAAYGVKRRTMMNDLEERERASFAVD 508
            LKDE ARKL+DDLL             +RE+ +R++    KR+ MM DLE RER++FA D
Sbjct: 61   LKDEKARKLFDDLL-----------RVKREQHRRQSERDSKRQKMMTDLEARERSAFAPD 109

Query: 509  PVGKXXXXXXXXXXXXXXXXXXXXXMHAKKSG---MAGRKRSEPEGEKRXXXXXXXLDGE 679
            P  K                     MHAKK        +K +   G+K        +D E
Sbjct: 110  PAAKELEEEEKIARKLKEEIARIRAMHAKKGAPTTFPPKKETGGVGKKSDGDAGPTMDKE 169

Query: 680  KVLKVSWEGNEDAYSAERLKELFKEFGEVEDVVIRSNKKRRTRSALVVMANKDSAVFAMG 859
            ++LKVSWE   + Y+AE+L+E+F +FGEVEDVVIR NKK+   SA++VM++KD+AV +  
Sbjct: 170  RMLKVSWEKIGEDYTAEKLREMFSKFGEVEDVVIRHNKKK--GSAVIVMSSKDAAVASTR 227

Query: 860  SVCGDLKNPLLVMPLNKAAPVEGSSVFPPRHVEPEPYIPVANNLVGASYQAKEASILDKL 1039
            +V GDL NPLLV+PL   + VE  S       E  P     +NLVGA YQA E SIL KL
Sbjct: 228  AVLGDLSNPLLVLPLQPVSSVEMPS------AERSPEHNRLDNLVGAGYQAFEDSILKKL 281

Query: 1040 MKAAEKQK 1063
             KA EKQK
Sbjct: 282  QKAGEKQK 289


>ref|XP_002522773.1| Pre-mRNA-splicing factor cwc23, putative [Ricinus communis]
            gi|223538011|gb|EEF39624.1| Pre-mRNA-splicing factor
            cwc23, putative [Ricinus communis]
          Length = 289

 Score =  241 bits (616), Expect = 2e-61
 Identities = 149/303 (49%), Positives = 183/303 (60%)
 Frame = +2

Query: 143  MEIEIDHYEILGLPSGEEGSKLTLDEIKTAYKKKSLKIHPDKNLNNPNAATEFKTLSASY 322
            M+I+IDHYE+LGL SGEEG+KLT +EI  AYKKK+L++HPDK  ++P+A   F+ L +SY
Sbjct: 1    MDIDIDHYEVLGLASGEEGAKLTENEISKAYKKKALELHPDKRRDDPDAHANFQKLKSSY 60

Query: 323  KILKDEAARKLYDDLLXXXXXXXXXXXXYEREKQQREAAYGVKRRTMMNDLEERERASFA 502
            +ILKDE ARKL+DDLL             +RE+         KR+ M++DLE RERA+FA
Sbjct: 61   EILKDEKARKLFDDLL-----------RVKRERYVHSFQRDSKRQKMVSDLEARERAAFA 109

Query: 503  VDPVGKXXXXXXXXXXXXXXXXXXXXXMHAKKSGMAGRKRSEPEGEKRXXXXXXXLDGEK 682
             DPV K                     MHA K G      S+ E            D EK
Sbjct: 110  PDPVAKAREEEDMIARKLKEEIERIRAMHANK-GAHATSASKREAVGVARESVNNTDREK 168

Query: 683  VLKVSWEGNEDAYSAERLKELFKEFGEVEDVVIRSNKKRRTRSALVVMANKDSAVFAMGS 862
            +LKVSWE   + YSAERLKELF +FGEVEDVVI S+KK+  RSALV MA K++AV A GS
Sbjct: 169  MLKVSWEKGGEDYSAERLKELFSKFGEVEDVVISSSKKK--RSALVQMATKEAAVAATGS 226

Query: 863  VCGDLKNPLLVMPLNKAAPVEGSSVFPPRHVEPEPYIPVANNLVGASYQAKEASILDKLM 1042
            V GDL NPLLV+P+  A   E    FP    + E      NNLVG  Y+A E SIL+KL 
Sbjct: 227  VSGDLNNPLLVLPVKPAIATE----FPSFQQQSES--AHVNNLVGTGYKAYEDSILEKLQ 280

Query: 1043 KAA 1051
            KAA
Sbjct: 281  KAA 283


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