BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011205
         (2454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277034.2| PREDICTED: zinc finger CCCH domain-containin...   431   e-118
ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus ...   424   e-116
ref|XP_002320858.1| predicted protein [Populus trichocarpa] gi|2...   422   e-115
ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containin...   411   e-112
ref|XP_002892071.1| zinc finger family protein [Arabidopsis lyra...   401   e-109

>ref|XP_002277034.2| PREDICTED: zinc finger CCCH domain-containing protein 1-like [Vitis
            vinifera] gi|297745423|emb|CBI40503.3| unnamed protein
            product [Vitis vinifera]
          Length = 331

 Score =  431 bits (1108), Expect = e-118
 Identities = 219/348 (62%), Positives = 243/348 (69%), Gaps = 1/348 (0%)
 Frame = +2

Query: 74   DSSEPQSSEQVCNFFRKPTKNKNIRKRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 253
            D+ E Q SE VCNFFRKPTKNKNIRKRT                                
Sbjct: 14   DTGEKQQSEPVCNFFRKPTKNKNIRKRT-------------------------------- 41

Query: 254  XXXXXXXXXXXXXXXSVTINRNKKQPKPDNKLVFSTGPIKKSDPXXXXXXXXXXXXIFQF 433
                           +  +++ KK PKPDNKL FSTG  +KS              IFQF
Sbjct: 42   ---HDEDENEDSKTGTSVLHQQKKPPKPDNKLYFSTGSSRKST---MDEPNKESEPIFQF 95

Query: 434  ESSSEIQVQNDSRATAISEIETDYTRDARAIRERMLKQAENTLKGKG-GDEKVYKGIHGY 610
            ESS EIQVQ+DSRATA  E ETD++RDARAIRER+LKQ+++ LKGK   DEK+YKGIHGY
Sbjct: 96   ESSKEIQVQHDSRATATLETETDFSRDARAIRERVLKQSQDALKGKNKSDEKLYKGIHGY 155

Query: 611  TDYKAGFRREQTIASEKAGGSHGPLRASAHIRASTRFDYQPDICKDYKETGYCGFGDACK 790
            TDYKAGFRREQT+ASEKAGG+HGPLRASAHIRAS RFDYQPDICKDYKETGYCGFGDACK
Sbjct: 156  TDYKAGFRREQTVASEKAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGFGDACK 215

Query: 791  FMHDRGDYKSGWQMEREWDEAEKVRKRNLAMGIMXXXXXXXXXXXXXXXXXXXKLPFACF 970
            FMHDRGDYKSGWQME+EW+EAEK RKRNLAMG                      LPFACF
Sbjct: 216  FMHDRGDYKSGWQMEKEWEEAEKARKRNLAMG---GDDADEGGGGQSDEDDDDALPFACF 272

Query: 971  ICREAFVDPVVTKCKHYFCEHCALKHHSKNKRCFVCNEPTLGIFNTAH 1114
            ICR+ FVDPVVTKCKH+FCEHCAL+HHSKNK+CFVCN+PTLG+FNTAH
Sbjct: 273  ICRQPFVDPVVTKCKHFFCEHCALRHHSKNKKCFVCNQPTLGMFNTAH 320


>ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus communis]
            gi|223538607|gb|EEF40210.1| RING finger protein 113A,
            putative [Ricinus communis]
          Length = 325

 Score =  424 bits (1089), Expect = e-116
 Identities = 215/352 (61%), Positives = 240/352 (68%), Gaps = 3/352 (0%)
 Frame = +2

Query: 68   MEDSSEPQSSEQVCNFFRKPTKNKNIRKRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 247
            M DS + +  E VCNFFRKP KNKNIRKRT                              
Sbjct: 1    MADSGQSEQPEPVCNFFRKPLKNKNIRKRTIEKDEEDDNSKTE----------------- 43

Query: 248  XXXXXXXXXXXXXXXXXSVTINRNKKQPKPDNKLVFSTGPIKKSDPXXXXXXXXXXXXIF 427
                             S  ++  KK PKPDNKL FSTGP K S              +F
Sbjct: 44   -----------------SSLLHNQKKAPKPDNKLYFSTGPSKNS-LSAAESVVESDRPVF 85

Query: 428  QFESSSEIQVQNDSRATAISEIETDYTRDARAIRERMLKQAENTLKGK---GGDEKVYKG 598
            QFESS EIQVQ+DSRATA  E ET++++DARAIRER LKQAE  LKGK    GD K+YKG
Sbjct: 86   QFESSKEIQVQHDSRATATLETETEFSKDARAIRERALKQAEEALKGKTLSSGDAKLYKG 145

Query: 599  IHGYTDYKAGFRREQTIASEKAGGSHGPLRASAHIRASTRFDYQPDICKDYKETGYCGFG 778
            IHGYTD+KAGFRREQTI+SEKAGGSHGPLRASAHIR S RFDYQPDICKDYKETGYCG+G
Sbjct: 146  IHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYG 205

Query: 779  DACKFMHDRGDYKSGWQMEREWDEAEKVRKRNLAMGIMXXXXXXXXXXXXXXXXXXXKLP 958
            D+CKFMHDRGDYKSGWQ+E+EWDEAEK+RKRNLA+G +                   +LP
Sbjct: 206  DSCKFMHDRGDYKSGWQLEKEWDEAEKIRKRNLALGEL---EGGTGENEEEDDDDEHELP 262

Query: 959  FACFICREAFVDPVVTKCKHYFCEHCALKHHSKNKRCFVCNEPTLGIFNTAH 1114
            FACFICR+ FVDPV TKCKHYFCEHCALKHH+KNK+CFVCN+PTLGIFNTAH
Sbjct: 263  FACFICRQPFVDPVTTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNTAH 314


>ref|XP_002320858.1| predicted protein [Populus trichocarpa] gi|222861631|gb|EEE99173.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  422 bits (1086), Expect = e-115
 Identities = 214/347 (61%), Positives = 240/347 (69%), Gaps = 3/347 (0%)
 Frame = +2

Query: 83   EPQSSEQVCNFFRKPTKNKNIRKRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 262
            EPQ +E VCNFFRKP KNKNIRKR                                    
Sbjct: 8    EPQQTEAVCNFFRKPMKNKNIRKRMIDEDEDEDSKTQ----------------------- 44

Query: 263  XXXXXXXXXXXXSVTINRNKKQPKPDNKLVFSTGPIKKSDPXXXXXXXXXXXXIFQFESS 442
                        +  ++  KK PK DNKL FSTGP+KKS              +FQFESS
Sbjct: 45   ------------TSLLHSQKKAPKADNKLYFSTGPLKKSSESNAEPERL----LFQFESS 88

Query: 443  SEIQVQNDSRATAISEIETDYTRDARAIRERMLKQAENTLKGK---GGDEKVYKGIHGYT 613
             EIQVQ+DSRATA  E ET++++DARAIRER LKQA++ LKGK    GDEK+YKGIHGYT
Sbjct: 89   KEIQVQHDSRATATLETETEFSKDARAIRERALKQADDALKGKKMSSGDEKLYKGIHGYT 148

Query: 614  DYKAGFRREQTIASEKAGGSHGPLRASAHIRASTRFDYQPDICKDYKETGYCGFGDACKF 793
            D+KAGFRREQTI+SEKAGGSHGPLRASAHIR S RFDYQPDICKDYKETGYCG+GD+CKF
Sbjct: 149  DHKAGFRREQTISSEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKF 208

Query: 794  MHDRGDYKSGWQMEREWDEAEKVRKRNLAMGIMXXXXXXXXXXXXXXXXXXXKLPFACFI 973
            MHDRGDYKSGWQME+EW+EAEK RKRNLA+G+                    +LPFACFI
Sbjct: 209  MHDRGDYKSGWQMEKEWEEAEKARKRNLALGM----DDEEVGGAGHDDDDEDELPFACFI 264

Query: 974  CREAFVDPVVTKCKHYFCEHCALKHHSKNKRCFVCNEPTLGIFNTAH 1114
            CRE FVDPV+TKCKHYFCEHCALKHH+KNK+CFVCNEPTLGIFN AH
Sbjct: 265  CRENFVDPVMTKCKHYFCEHCALKHHAKNKKCFVCNEPTLGIFNAAH 311


>ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containing protein 1-like [Cucumis
            sativus]
          Length = 322

 Score =  411 bits (1056), Expect = e-112
 Identities = 213/352 (60%), Positives = 237/352 (67%), Gaps = 3/352 (0%)
 Frame = +2

Query: 68   MEDSSEPQSSEQVCNFFRKPTKNKNIRKRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 247
            M D+ + Q SEQVC+FFRKPTKNKNIRKRT                              
Sbjct: 1    MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAET----------------- 43

Query: 248  XXXXXXXXXXXXXXXXXSVTINRNKKQPKPDNKLVFSTGPIKKSDPXXXXXXXXXXXXIF 427
                             S  +N+ KK PK ++KL FS+GP K S              IF
Sbjct: 44   -----------------SFLLNQ-KKAPKTESKLYFSSGPSKNSSSNESNVEPNKP--IF 83

Query: 428  QFESSSEIQVQNDSRATAISEIETDYTRDARAIRERMLKQAENTLKGKG---GDEKVYKG 598
            QFESS EIQV +DSRATA  E ETD++RDARAIRER+LKQAE  LKGKG   G EK+YKG
Sbjct: 84   QFESSKEIQVHHDSRATATLETETDFSRDARAIRERVLKQAEEALKGKGKSSGGEKLYKG 143

Query: 599  IHGYTDYKAGFRREQTIASEKAGGSHGPLRASAHIRASTRFDYQPDICKDYKETGYCGFG 778
            ++ Y DYKAGFRRE TI+SEKAGG+HGPLRASAHIRAS RFDYQPDICKDYKETGYCG+G
Sbjct: 144  VNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGYG 203

Query: 779  DACKFMHDRGDYKSGWQMEREWDEAEKVRKRNLAMGIMXXXXXXXXXXXXXXXXXXXKLP 958
            DACKFMHDRGDYKSGWQ+E+EW+E EK RKR LA   M                    LP
Sbjct: 204  DACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLA---MKSDDGDEDTSEQSDEDEEDALP 260

Query: 959  FACFICREAFVDPVVTKCKHYFCEHCALKHHSKNKRCFVCNEPTLGIFNTAH 1114
            FACFICRE FVDPVVTKCKHYFCEHCALKHH+KNK+CFVCN+PTLGIFNTAH
Sbjct: 261  FACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNTAH 312


>ref|XP_002892071.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297337913|gb|EFH68330.1| zinc finger family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score =  401 bits (1030), Expect = e-109
 Identities = 203/351 (57%), Positives = 233/351 (66%), Gaps = 3/351 (0%)
 Frame = +2

Query: 71   EDSSEPQSSEQVCNFFRKPTKNKNIRKRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 250
            + + E   S+QVC FF+KPTK+KNIRKR                                
Sbjct: 18   QPAGEETKSQQVCTFFKKPTKSKNIRKRAIDADEEDGDSKSE------------------ 59

Query: 251  XXXXXXXXXXXXXXXXSVTINRNKKQPKPDNKLVFSTGPIKKSDPXXXXXXXXXXXXIFQ 430
                            S  +   KK  KPD+KL FS+GP K S              +F 
Sbjct: 60   ----------------SSILQNLKKVAKPDSKLYFSSGPAKSSTTSEAAERP-----VFH 98

Query: 431  FESSSEIQVQNDSRATAISEIETDYTRDARAIRERMLKQAENTLKG---KGGDEKVYKGI 601
            ++SS EIQVQNDSRATA  E ETD+ +DARAIRER+LK+A+  LKG   K  DEK+YKGI
Sbjct: 99   YDSSKEIQVQNDSRATATLETETDFNQDARAIRERVLKKADEALKGNKKKASDEKLYKGI 158

Query: 602  HGYTDYKAGFRREQTIASEKAGGSHGPLRASAHIRASTRFDYQPDICKDYKETGYCGFGD 781
            HGYTD+KAGFRREQTI+SEKAGGSHGPLRASAHIR S RFDYQPDICKDYKETGYCG+GD
Sbjct: 159  HGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGD 218

Query: 782  ACKFMHDRGDYKSGWQMEREWDEAEKVRKRNLAMGIMXXXXXXXXXXXXXXXXXXXKLPF 961
            +CKF+HDRGDYK GWQ+E+EW+EAEKVRKRN AMG+                     LPF
Sbjct: 219  SCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGV----EDEDDEADNDSDEDENALPF 274

Query: 962  ACFICREAFVDPVVTKCKHYFCEHCALKHHSKNKRCFVCNEPTLGIFNTAH 1114
            ACFICRE FVDPVVTKCKHYFCEHCALKHH+KNK+CFVCN+PT+GIFN AH
Sbjct: 275  ACFICREPFVDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPTMGIFNAAH 325