BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011186
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307523.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|NP_001042234.1| Os01g0184500 [Oryza sativa Japonica Group] g...    91   1e-16
emb|CBI29363.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    91   1e-16
emb|CAN60389.1| hypothetical protein VITISV_010912 [Vitis vinifera]    91   1e-16

>ref|XP_002307523.1| predicted protein [Populus trichocarpa] gi|222856972|gb|EEE94519.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 53/76 (69%), Positives = 64/76 (84%), Gaps = 2/76 (2%)
 Frame = +2

Query: 2   TGRTARMGAKGKVTSLVAKKDTSLAARIEEAIRKNESLESLTVDNFRMASDKARVS-LKG 178
           TGRTARMGAKGKVTSLVA+KD  LAARIEEA+RKNESLESLTVDN R    +AR++  +G
Sbjct: 463 TGRTARMGAKGKVTSLVARKDQQLAARIEEAMRKNESLESLTVDNVRRDIARARITEQQG 522

Query: 179 KSS-TVRASNQKSKSE 223
           KS+  ++ASNQKS ++
Sbjct: 523 KSAKLIKASNQKSNNK 538


>ref|NP_001042234.1| Os01g0184500 [Oryza sativa Japonica Group]
           gi|75321764|sp|Q5VRY0.1|RH39_ORYSJ RecName:
           Full=DEAD-box ATP-dependent RNA helicase 39
           gi|55295927|dbj|BAD67795.1| putative VASA [Oryza sativa
           Japonica Group] gi|113531765|dbj|BAF04148.1|
           Os01g0184500 [Oryza sativa Japonica Group]
           gi|222617875|gb|EEE54007.1| hypothetical protein
           OsJ_00660 [Oryza sativa Japonica Group]
          Length = 625

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 51/94 (54%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
 Frame = +2

Query: 2   TGRTARMGAKGKVTSLVAKKDTSLAARIEEAIRKNESLESLTVDNFRMAS-DKARVSLKG 178
           TGRTARMGAKGKVTSLVAKKD +LA RIEEA++KNESLE+LT +N R A+ +    S KG
Sbjct: 457 TGRTARMGAKGKVTSLVAKKDVTLATRIEEAMKKNESLEALTTNNVRRAAVNPQYTSTKG 516

Query: 179 KSSTVRASNQKSKSELAKPSRGRGKVVAVDTSRR 280
           + S ++  NQK +  +A  ++    V    +SRR
Sbjct: 517 RPSALKVVNQKGRRGVALQTKSSRIVKDTTSSRR 550


>emb|CBI29363.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
 Frame = +2

Query: 2   TGRTARMGAKGKVTSLVAKKDTSLAARIEEAIRKNESLESLTVDNFRMASDKARVS-LKG 178
           TGRTARMGAKGKVTSLVAKKD  LA RIEEAIRKNESLE+LT DN R    +A++S  K 
Sbjct: 336 TGRTARMGAKGKVTSLVAKKDLLLATRIEEAIRKNESLEALTADNLRRDVARAKISEQKA 395

Query: 179 KSST-VRASNQKSKSELAKPSRGRGKVVAVDTSRR 280
           K++  V+ S QK+K+++ +  +   K  +  TS R
Sbjct: 396 KNANLVKVSKQKNKTKV-ESMKSSSKAASTQTSGR 429


>ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Vitis vinifera]
          Length = 635

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
 Frame = +2

Query: 2   TGRTARMGAKGKVTSLVAKKDTSLAARIEEAIRKNESLESLTVDNFRMASDKARVS-LKG 178
           TGRTARMGAKGKVTSLVAKKD  LA RIEEAIRKNESLE+LT DN R    +A++S  K 
Sbjct: 466 TGRTARMGAKGKVTSLVAKKDLLLATRIEEAIRKNESLEALTADNLRRDVARAKISEQKA 525

Query: 179 KSST-VRASNQKSKSELAKPSRGRGKVVAVDTSRR 280
           K++  V+ S QK+K+++ +  +   K  +  TS R
Sbjct: 526 KNANLVKVSKQKNKTKV-ESMKSSSKAASTQTSGR 559


>emb|CAN60389.1| hypothetical protein VITISV_010912 [Vitis vinifera]
          Length = 297

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
 Frame = +2

Query: 2   TGRTARMGAKGKVTSLVAKKDTSLAARIEEAIRKNESLESLTVDNFRMASDKARVS-LKG 178
           TGRTARMGAKGKVTSLVAKKD  LA RIEEAIRKNESLE+LT DN R    +A++S  K 
Sbjct: 128 TGRTARMGAKGKVTSLVAKKDLLLATRIEEAIRKNESLEALTADNLRRDVARAKISEQKA 187

Query: 179 KSST-VRASNQKSKSELAKPSRGRGKVVAVDTSRR 280
           K++  V+ S QK+K+++ +  +   K  +  TS R
Sbjct: 188 KNANLVKVSKQKNKTKV-ESMKSSSKAASTQTSGR 221