BLASTX nr result
ID: Coptis25_contig00011182
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011182
(646 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253... 118 3e-36
ref|XP_002282376.2| PREDICTED: uncharacterized protein LOC100250... 100 9e-32
ref|XP_002282360.1| PREDICTED: uncharacterized protein LOC100260... 100 7e-31
ref|XP_002282384.2| PREDICTED: uncharacterized protein LOC100245... 102 2e-30
emb|CAN77048.1| hypothetical protein VITISV_027858 [Vitis vinifera] 101 4e-30
>ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253928 [Vitis vinifera]
Length = 708
Score = 118 bits (296), Expect(2) = 3e-36
Identities = 68/154 (44%), Positives = 96/154 (62%), Gaps = 8/154 (5%)
Frame = +1
Query: 208 KIVFQSPWNIIYAVPGLKYEYTQTGAVVKSCAKKTARK-KGGRYPTGYSSDVHFTMRVSN 384
+IVFQ N+ +PGLKYEYT+T ++ K+CAKK K KG YP G+S D+ F M V N
Sbjct: 185 RIVFQDTGNVQIDLPGLKYEYTETDSISKACAKKKGVKHKGQVYPDGHSLDMRFDMSVRN 244
Query: 385 SRGKHSWCYSGPLFVGDR-----VYERYSPIT--LAASVQVIDTHPKGLLNVSYSLSFTP 543
S+G+ W ++ PLFVGD+ +Y ++ P + L S ++ T ++N+SY LSFTP
Sbjct: 245 SKGQVGWGHAFPLFVGDKFVGDQLYGKFRPHSPRLGGSEALVSTSHNSVVNISYKLSFTP 304
Query: 544 AFIGLSSKNVSLNYITPVEISAEGIYNPETGSLC 645
+ + +S + VEISAEGIY+ ETG LC
Sbjct: 305 STSLMLVGKISSS--RSVEISAEGIYDKETGVLC 336
Score = 59.3 bits (142), Expect(2) = 3e-36
Identities = 26/42 (61%), Positives = 34/42 (80%)
Frame = +3
Query: 3 SIRLSLLFPAIASIKNRRRVVGQLWSNKTFNESGFFDKIVFQ 128
SI+L+L FPA SIKNR +VGQ+WSN+T N+ G+F +IVFQ
Sbjct: 148 SIKLNLRFPATMSIKNRSTIVGQIWSNRTVNDLGYFGRIVFQ 189
>ref|XP_002282376.2| PREDICTED: uncharacterized protein LOC100250261 [Vitis vinifera]
Length = 932
Score = 100 bits (248), Expect(2) = 9e-32
Identities = 72/172 (41%), Positives = 89/172 (51%), Gaps = 26/172 (15%)
Frame = +1
Query: 208 KIVFQSPWNIIYAVPGLKYEYTQTGAVVKSCAKKT-ARKKGGRYPTGYSSDVHFTMRVSN 384
KI+FQS N + +PG KYEYT+ K C KK A KKG YP GYSSD+ M V N
Sbjct: 400 KIMFQSIRNRMPGIPGSKYEYTEIERARKLCLKKKPAEKKGVAYPNGYSSDMQLDMSVRN 459
Query: 385 SRGKHSWCYSGPLFVGDRVYERY---------SPITLAAS----------VQVIDTHPKG 507
S W YS + +GDR Y+RY S + +A S D+ P
Sbjct: 460 STHLMGWAYSELITLGDRFYDRYAQSIVSLEESSVAVATSSASTPENSFETNASDSRP-- 517
Query: 508 LLNVSYSLSFT--PAF----IGLSSKNVSLNYITPVEISAEGIYNPETGSLC 645
+NVSY +S T P + +S N S Y TPVEISAEGIY+ +TG LC
Sbjct: 518 -MNVSYRISLTLEPGVKFGDMIISPSNFSGIY-TPVEISAEGIYDAKTGFLC 567
Score = 62.8 bits (151), Expect(2) = 9e-32
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = +3
Query: 3 SIRLSLLFPAIASIKNRRRVVGQLWSNKTFNESGFFDKIVFQ 128
SI+LSL FPAI SI+NR VVGQ+WS+KT N+ GFF KI+FQ
Sbjct: 363 SIKLSLRFPAILSIRNRSTVVGQIWSDKTVNDPGFFSKIMFQ 404
>ref|XP_002282360.1| PREDICTED: uncharacterized protein LOC100260511 [Vitis vinifera]
gi|302143014|emb|CBI20309.3| unnamed protein product
[Vitis vinifera]
Length = 916
Score = 100 bits (249), Expect(2) = 7e-31
Identities = 65/160 (40%), Positives = 92/160 (57%), Gaps = 14/160 (8%)
Frame = +1
Query: 208 KIVFQSPWNIIYAVPGLKYEYTQTGAVVKSC-AKKTARKKGGRY--PTGYSSDVHFTMRV 378
+I+FQSP NI +PGLKYEYT+ K C KK A KG RY P +S D+ F M V
Sbjct: 403 RIMFQSPENIRLEIPGLKYEYTEIDRAGKLCQKKKCAENKGERYPNPNDFSFDMQFDMMV 462
Query: 379 SNSRGKHSWCYSGPLFVGDRVYERYSPITLAASVQ----VIDTHPKGL--LNVSYSLSFT 540
NS G +W + P FVGD +Y+ + ++S + V++ + + + +N+SY +SFT
Sbjct: 463 KNSTGVMAWGSAAPFFVGDNLYDPFEYGIPSSSSEPGSSVVEANARHISPVNISYKISFT 522
Query: 541 ----PAFIGLSSK-NVSLNYITPVEISAEGIYNPETGSLC 645
F G+ S + SL V+ISAEGIY+ +TG LC
Sbjct: 523 LEPGAEFGGIISPFSESLGRHMKVDISAEGIYDAKTGGLC 562
Score = 59.3 bits (142), Expect(2) = 7e-31
Identities = 26/42 (61%), Positives = 36/42 (85%)
Frame = +3
Query: 3 SIRLSLLFPAIASIKNRRRVVGQLWSNKTFNESGFFDKIVFQ 128
SIRLSL FPAI I++R +VGQ+WSNKT ++SG+F++I+FQ
Sbjct: 366 SIRLSLRFPAIWLIRSRSNIVGQIWSNKTIDDSGYFNRIMFQ 407
>ref|XP_002282384.2| PREDICTED: uncharacterized protein LOC100245140 [Vitis vinifera]
Length = 946
Score = 102 bits (253), Expect(2) = 2e-30
Identities = 68/168 (40%), Positives = 87/168 (51%), Gaps = 22/168 (13%)
Frame = +1
Query: 208 KIVFQSPWNIIYAVPGLKYEYTQTGAVVKSCA-KKTARKKGGRYPTGYSSDVHFTMRVSN 384
+I FQS N++ V G KYEYT+T C KK A KG YP GYSSD+ F M V N
Sbjct: 409 RIAFQSTQNVMLEVRGFKYEYTETDRARSLCQIKKPAGNKGVAYPNGYSSDMQFHMSVKN 468
Query: 385 SRGKHSWCYSGPLFVGDRVYERYS---PITLAASVQVIDTHPKGL-------------LN 516
S+G +W +S P V R+Y+ Y P+++ + V + P +N
Sbjct: 469 SKGVMAWGFSAPFVVDYRLYKPYQYAMPLSINSKSSVPVSRPMPANRVVEANTSNSIPMN 528
Query: 517 VSYSLSFT----PAFIG-LSSKNVSLNYITPVEISAEGIYNPETGSLC 645
+SY +SF F G +SS N S T VEISAEGIYN TG LC
Sbjct: 529 ISYKISFMLEPGVEFEGFVSSLNSSSLMHTQVEISAEGIYNARTGGLC 576
Score = 56.2 bits (134), Expect(2) = 2e-30
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +3
Query: 3 SIRLSLLFPAIASIKNRRRVVGQLWSNKTFNESGFFDKIVFQ 128
S+RLSL F I SI+N ++GQ+WSNKT NESG+F++I FQ
Sbjct: 372 SVRLSLRFNTIWSIRNMSMMLGQIWSNKTVNESGYFERIAFQ 413
>emb|CAN77048.1| hypothetical protein VITISV_027858 [Vitis vinifera]
Length = 1269
Score = 101 bits (251), Expect(2) = 4e-30
Identities = 70/168 (41%), Positives = 85/168 (50%), Gaps = 22/168 (13%)
Frame = +1
Query: 208 KIVFQSPWNIIYAVPGLKYEYTQTGAVVKSCA-KKTARKKGGRYPTGYSSDVHFTMRVSN 384
+I FQS N++ V G KYEYT+T C KK A KG YP GYSSD+ F M V N
Sbjct: 732 RIAFQSTQNVMLEVRGFKYEYTETDRARSLCQIKKPAGNKGVAYPNGYSSDMQFHMSVKN 791
Query: 385 SRGKHSWCYSGPLFVGDRVYERYS-----PITLAASVQVIDTHPKGL-----------LN 516
S+G +W +S P V R+Y+ Y I +SV V P +N
Sbjct: 792 SKGVMAWGFSAPFVVDYRLYKPYQYAMPLSINSKSSVPVSRXMPANRVVEANTSNSIPMN 851
Query: 517 VSYSLSFT----PAFIG-LSSKNVSLNYITPVEISAEGIYNPETGSLC 645
+SY +SF F G +SS N S T VEISAEGIYN TG LC
Sbjct: 852 ISYKISFMLEPGVEFEGFVSSLNSSSLMHTQVEISAEGIYNARTGGLC 899
Score = 56.2 bits (134), Expect(2) = 4e-30
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +3
Query: 3 SIRLSLLFPAIASIKNRRRVVGQLWSNKTFNESGFFDKIVFQ 128
S+RLSL F I SI+N ++GQ+WSNKT NESG+F++I FQ
Sbjct: 695 SVRLSLRFNTIWSIRNMSMMLGQIWSNKTVNESGYFERIAFQ 736
Score = 78.2 bits (191), Expect = 1e-12
Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Frame = +1
Query: 208 KIVFQSPWNIIYAVPGLKYEYTQTGAVVKSCAKKTARKKGGRYPTGYSSDVHFTMRVSNS 387
+I+FQS + V GLKYEYT+ C KK KG YP YS D+HF V NS
Sbjct: 137 RIMFQSSNINLLGVQGLKYEYTKIDRAKNLCQKKKPEGKGLIYPNVYSIDMHFGTSVRNS 196
Query: 388 RGKHSWCYSGPLFVGDRVYERYS---PIT--LAASVQVIDTHP-----------KGLLNV 519
+G +W YS PLFVGD+ + Y P++ +SV + + P LLN+
Sbjct: 197 KGVKAWGYSEPLFVGDKFCDPYKYAIPVSENSRSSVPISTSMPANSEVEANAGDSSLLNI 256
Query: 520 SYSLSF 537
SY +SF
Sbjct: 257 SYKISF 262