BLASTX nr result

ID: Coptis25_contig00011182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011182
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253...   118   3e-36
ref|XP_002282376.2| PREDICTED: uncharacterized protein LOC100250...   100   9e-32
ref|XP_002282360.1| PREDICTED: uncharacterized protein LOC100260...   100   7e-31
ref|XP_002282384.2| PREDICTED: uncharacterized protein LOC100245...   102   2e-30
emb|CAN77048.1| hypothetical protein VITISV_027858 [Vitis vinifera]   101   4e-30

>ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253928 [Vitis vinifera]
          Length = 708

 Score =  118 bits (296), Expect(2) = 3e-36
 Identities = 68/154 (44%), Positives = 96/154 (62%), Gaps = 8/154 (5%)
 Frame = +1

Query: 208 KIVFQSPWNIIYAVPGLKYEYTQTGAVVKSCAKKTARK-KGGRYPTGYSSDVHFTMRVSN 384
           +IVFQ   N+   +PGLKYEYT+T ++ K+CAKK   K KG  YP G+S D+ F M V N
Sbjct: 185 RIVFQDTGNVQIDLPGLKYEYTETDSISKACAKKKGVKHKGQVYPDGHSLDMRFDMSVRN 244

Query: 385 SRGKHSWCYSGPLFVGDR-----VYERYSPIT--LAASVQVIDTHPKGLLNVSYSLSFTP 543
           S+G+  W ++ PLFVGD+     +Y ++ P +  L  S  ++ T    ++N+SY LSFTP
Sbjct: 245 SKGQVGWGHAFPLFVGDKFVGDQLYGKFRPHSPRLGGSEALVSTSHNSVVNISYKLSFTP 304

Query: 544 AFIGLSSKNVSLNYITPVEISAEGIYNPETGSLC 645
           +   +    +S +    VEISAEGIY+ ETG LC
Sbjct: 305 STSLMLVGKISSS--RSVEISAEGIYDKETGVLC 336



 Score = 59.3 bits (142), Expect(2) = 3e-36
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = +3

Query: 3   SIRLSLLFPAIASIKNRRRVVGQLWSNKTFNESGFFDKIVFQ 128
           SI+L+L FPA  SIKNR  +VGQ+WSN+T N+ G+F +IVFQ
Sbjct: 148 SIKLNLRFPATMSIKNRSTIVGQIWSNRTVNDLGYFGRIVFQ 189


>ref|XP_002282376.2| PREDICTED: uncharacterized protein LOC100250261 [Vitis vinifera]
          Length = 932

 Score =  100 bits (248), Expect(2) = 9e-32
 Identities = 72/172 (41%), Positives = 89/172 (51%), Gaps = 26/172 (15%)
 Frame = +1

Query: 208 KIVFQSPWNIIYAVPGLKYEYTQTGAVVKSCAKKT-ARKKGGRYPTGYSSDVHFTMRVSN 384
           KI+FQS  N +  +PG KYEYT+     K C KK  A KKG  YP GYSSD+   M V N
Sbjct: 400 KIMFQSIRNRMPGIPGSKYEYTEIERARKLCLKKKPAEKKGVAYPNGYSSDMQLDMSVRN 459

Query: 385 SRGKHSWCYSGPLFVGDRVYERY---------SPITLAAS----------VQVIDTHPKG 507
           S     W YS  + +GDR Y+RY         S + +A S              D+ P  
Sbjct: 460 STHLMGWAYSELITLGDRFYDRYAQSIVSLEESSVAVATSSASTPENSFETNASDSRP-- 517

Query: 508 LLNVSYSLSFT--PAF----IGLSSKNVSLNYITPVEISAEGIYNPETGSLC 645
            +NVSY +S T  P      + +S  N S  Y TPVEISAEGIY+ +TG LC
Sbjct: 518 -MNVSYRISLTLEPGVKFGDMIISPSNFSGIY-TPVEISAEGIYDAKTGFLC 567



 Score = 62.8 bits (151), Expect(2) = 9e-32
 Identities = 29/42 (69%), Positives = 35/42 (83%)
 Frame = +3

Query: 3   SIRLSLLFPAIASIKNRRRVVGQLWSNKTFNESGFFDKIVFQ 128
           SI+LSL FPAI SI+NR  VVGQ+WS+KT N+ GFF KI+FQ
Sbjct: 363 SIKLSLRFPAILSIRNRSTVVGQIWSDKTVNDPGFFSKIMFQ 404


>ref|XP_002282360.1| PREDICTED: uncharacterized protein LOC100260511 [Vitis vinifera]
           gi|302143014|emb|CBI20309.3| unnamed protein product
           [Vitis vinifera]
          Length = 916

 Score =  100 bits (249), Expect(2) = 7e-31
 Identities = 65/160 (40%), Positives = 92/160 (57%), Gaps = 14/160 (8%)
 Frame = +1

Query: 208 KIVFQSPWNIIYAVPGLKYEYTQTGAVVKSC-AKKTARKKGGRY--PTGYSSDVHFTMRV 378
           +I+FQSP NI   +PGLKYEYT+     K C  KK A  KG RY  P  +S D+ F M V
Sbjct: 403 RIMFQSPENIRLEIPGLKYEYTEIDRAGKLCQKKKCAENKGERYPNPNDFSFDMQFDMMV 462

Query: 379 SNSRGKHSWCYSGPLFVGDRVYERYSPITLAASVQ----VIDTHPKGL--LNVSYSLSFT 540
            NS G  +W  + P FVGD +Y+ +     ++S +    V++ + + +  +N+SY +SFT
Sbjct: 463 KNSTGVMAWGSAAPFFVGDNLYDPFEYGIPSSSSEPGSSVVEANARHISPVNISYKISFT 522

Query: 541 ----PAFIGLSSK-NVSLNYITPVEISAEGIYNPETGSLC 645
                 F G+ S  + SL     V+ISAEGIY+ +TG LC
Sbjct: 523 LEPGAEFGGIISPFSESLGRHMKVDISAEGIYDAKTGGLC 562



 Score = 59.3 bits (142), Expect(2) = 7e-31
 Identities = 26/42 (61%), Positives = 36/42 (85%)
 Frame = +3

Query: 3   SIRLSLLFPAIASIKNRRRVVGQLWSNKTFNESGFFDKIVFQ 128
           SIRLSL FPAI  I++R  +VGQ+WSNKT ++SG+F++I+FQ
Sbjct: 366 SIRLSLRFPAIWLIRSRSNIVGQIWSNKTIDDSGYFNRIMFQ 407


>ref|XP_002282384.2| PREDICTED: uncharacterized protein LOC100245140 [Vitis vinifera]
          Length = 946

 Score =  102 bits (253), Expect(2) = 2e-30
 Identities = 68/168 (40%), Positives = 87/168 (51%), Gaps = 22/168 (13%)
 Frame = +1

Query: 208 KIVFQSPWNIIYAVPGLKYEYTQTGAVVKSCA-KKTARKKGGRYPTGYSSDVHFTMRVSN 384
           +I FQS  N++  V G KYEYT+T      C  KK A  KG  YP GYSSD+ F M V N
Sbjct: 409 RIAFQSTQNVMLEVRGFKYEYTETDRARSLCQIKKPAGNKGVAYPNGYSSDMQFHMSVKN 468

Query: 385 SRGKHSWCYSGPLFVGDRVYERYS---PITLAASVQVIDTHPKGL-------------LN 516
           S+G  +W +S P  V  R+Y+ Y    P+++ +   V  + P                +N
Sbjct: 469 SKGVMAWGFSAPFVVDYRLYKPYQYAMPLSINSKSSVPVSRPMPANRVVEANTSNSIPMN 528

Query: 517 VSYSLSFT----PAFIG-LSSKNVSLNYITPVEISAEGIYNPETGSLC 645
           +SY +SF       F G +SS N S    T VEISAEGIYN  TG LC
Sbjct: 529 ISYKISFMLEPGVEFEGFVSSLNSSSLMHTQVEISAEGIYNARTGGLC 576



 Score = 56.2 bits (134), Expect(2) = 2e-30
 Identities = 25/42 (59%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   SIRLSLLFPAIASIKNRRRVVGQLWSNKTFNESGFFDKIVFQ 128
           S+RLSL F  I SI+N   ++GQ+WSNKT NESG+F++I FQ
Sbjct: 372 SVRLSLRFNTIWSIRNMSMMLGQIWSNKTVNESGYFERIAFQ 413


>emb|CAN77048.1| hypothetical protein VITISV_027858 [Vitis vinifera]
          Length = 1269

 Score =  101 bits (251), Expect(2) = 4e-30
 Identities = 70/168 (41%), Positives = 85/168 (50%), Gaps = 22/168 (13%)
 Frame = +1

Query: 208  KIVFQSPWNIIYAVPGLKYEYTQTGAVVKSCA-KKTARKKGGRYPTGYSSDVHFTMRVSN 384
            +I FQS  N++  V G KYEYT+T      C  KK A  KG  YP GYSSD+ F M V N
Sbjct: 732  RIAFQSTQNVMLEVRGFKYEYTETDRARSLCQIKKPAGNKGVAYPNGYSSDMQFHMSVKN 791

Query: 385  SRGKHSWCYSGPLFVGDRVYERYS-----PITLAASVQVIDTHPKGL-----------LN 516
            S+G  +W +S P  V  R+Y+ Y       I   +SV V    P              +N
Sbjct: 792  SKGVMAWGFSAPFVVDYRLYKPYQYAMPLSINSKSSVPVSRXMPANRVVEANTSNSIPMN 851

Query: 517  VSYSLSFT----PAFIG-LSSKNVSLNYITPVEISAEGIYNPETGSLC 645
            +SY +SF       F G +SS N S    T VEISAEGIYN  TG LC
Sbjct: 852  ISYKISFMLEPGVEFEGFVSSLNSSSLMHTQVEISAEGIYNARTGGLC 899



 Score = 56.2 bits (134), Expect(2) = 4e-30
 Identities = 25/42 (59%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   SIRLSLLFPAIASIKNRRRVVGQLWSNKTFNESGFFDKIVFQ 128
           S+RLSL F  I SI+N   ++GQ+WSNKT NESG+F++I FQ
Sbjct: 695 SVRLSLRFNTIWSIRNMSMMLGQIWSNKTVNESGYFERIAFQ 736



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
 Frame = +1

Query: 208 KIVFQSPWNIIYAVPGLKYEYTQTGAVVKSCAKKTARKKGGRYPTGYSSDVHFTMRVSNS 387
           +I+FQS    +  V GLKYEYT+       C KK    KG  YP  YS D+HF   V NS
Sbjct: 137 RIMFQSSNINLLGVQGLKYEYTKIDRAKNLCQKKKPEGKGLIYPNVYSIDMHFGTSVRNS 196

Query: 388 RGKHSWCYSGPLFVGDRVYERYS---PIT--LAASVQVIDTHP-----------KGLLNV 519
           +G  +W YS PLFVGD+  + Y    P++    +SV +  + P             LLN+
Sbjct: 197 KGVKAWGYSEPLFVGDKFCDPYKYAIPVSENSRSSVPISTSMPANSEVEANAGDSSLLNI 256

Query: 520 SYSLSF 537
           SY +SF
Sbjct: 257 SYKISF 262


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