BLASTX nr result

ID: Coptis25_contig00011175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011175
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281252.1| PREDICTED: uncharacterized protein LOC100260...   150   3e-34
ref|XP_002329519.1| predicted protein [Populus trichocarpa] gi|2...   146   6e-33
ref|XP_002326716.1| predicted protein [Populus trichocarpa] gi|2...   145   1e-32
ref|XP_002519833.1| conserved hypothetical protein [Ricinus comm...   144   3e-32
ref|XP_004148488.1| PREDICTED: uncharacterized protein LOC101221...   131   2e-28

>ref|XP_002281252.1| PREDICTED: uncharacterized protein LOC100260742 [Vitis vinifera]
           gi|297742127|emb|CBI33914.3| unnamed protein product
           [Vitis vinifera]
          Length = 155

 Score =  150 bits (380), Expect = 3e-34
 Identities = 82/159 (51%), Positives = 110/159 (69%), Gaps = 4/159 (2%)
 Frame = +3

Query: 132 MRFLKRIAGIFGLLKDE----RELESEESGDTHDREIKEELPLPLPRGQRKGFSVQVPVH 299
           M FL+RIAGI G  KDE    R+++ +E+    DR  +EE+ +   R  RKGFSV   V 
Sbjct: 1   MGFLRRIAGILGFAKDEPHETRDVD-DENDVVRDRTSREEVEVEDTRLPRKGFSVPAQVV 59

Query: 300 NQLGPLLTPSNNLNDGGVQGLRWYARRLRIDEDGDVADEFLDEIVPEVVEMPSNMDDQRP 479
            + GPLL P  +  +GGVQGL+WYA+RLR+DEDGDVADEF+DE+ P+     S  D +RP
Sbjct: 60  IERGPLLVPCTS-GEGGVQGLKWYAKRLRVDEDGDVADEFIDEVSPDT--SSSAEDHRRP 116

Query: 480 VSKFEVKYRTRPAKVRKQVISIDGKLQQSVEYQGRLQFV 596
           + +F+V YR R AKVR Q +S+DGK+QQ +E+QGRL +V
Sbjct: 117 LPRFQVNYRNRAAKVRNQKMSLDGKIQQGLEFQGRLMWV 155


>ref|XP_002329519.1| predicted protein [Populus trichocarpa] gi|222870228|gb|EEF07359.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  146 bits (369), Expect = 6e-33
 Identities = 87/173 (50%), Positives = 113/173 (65%), Gaps = 18/173 (10%)
 Frame = +3

Query: 132 MRFLKRIAGIFGLLKDER------ELESEESGDTHD--------REIKEELPLPLPRGQR 269
           MRF KR+AG  G  KD+       + E EE  + H         R   +E  LP     R
Sbjct: 1   MRFFKRLAGFLGFAKDDGGHEVKDQQEQEEDEEDHHQHPNQAPFRSNFQETGLP-----R 55

Query: 270 KGFSVQVPV---HNQLGPLLTPSNNLNDGGVQGLRWYARRLRIDEDGDVADEFLDEIVPE 440
           KGFSV + V     QLGP++   N+  DGGVQGLRWYA+RLRIDEDGDVADEF DE++P+
Sbjct: 56  KGFSVPLQVAVERPQLGPVIVSCNS-GDGGVQGLRWYAKRLRIDEDGDVADEFFDEVLPD 114

Query: 441 VVEMPSNMDDQ-RPVSKFEVKYRTRPAKVRKQVISIDGKLQQSVEYQGRLQFV 596
                S++D+Q +P+ +FEVKY TRPAK++ Q++S DGK+QQ VE+QGRLQ+V
Sbjct: 115 T---SSSVDEQHKPLLRFEVKYSTRPAKIKTQMMSHDGKIQQRVEHQGRLQWV 164


>ref|XP_002326716.1| predicted protein [Populus trichocarpa] gi|222834038|gb|EEE72515.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  145 bits (366), Expect = 1e-32
 Identities = 87/173 (50%), Positives = 115/173 (66%), Gaps = 18/173 (10%)
 Frame = +3

Query: 132 MRFLKRIAGIFGL--------LKDERELESEESGD-THDREIK-----EELPLPLPRGQR 269
           MRF KRIAG  G         +KD+++ E+EE  D  H   ++     +E  LP     R
Sbjct: 1   MRFFKRIAGFLGFAKDDGGYEVKDQQQEEAEEQDDHQHPNHVRFRSNFQETGLP-----R 55

Query: 270 KGFSVQVPV---HNQLGPLLTPSNNLNDGGVQGLRWYARRLRIDEDGDVADEFLDEIVPE 440
           KGF V V V     QLGPL+    +  DGG+QGLRWYA+RLRIDEDGDVADEF DE++P 
Sbjct: 56  KGFGVPVQVAVERPQLGPLIVSCIS-GDGGLQGLRWYAKRLRIDEDGDVADEFFDEVLPN 114

Query: 441 VVEMPSNMDDQ-RPVSKFEVKYRTRPAKVRKQVISIDGKLQQSVEYQGRLQFV 596
                S++D+Q +P+ +FEVK+ TRPAK++KQ++S DGK+QQ VE+QGRLQ+V
Sbjct: 115 T---SSSVDEQHKPLPRFEVKHSTRPAKIKKQMMSHDGKIQQCVEHQGRLQWV 164


>ref|XP_002519833.1| conserved hypothetical protein [Ricinus communis]
           gi|223540879|gb|EEF42437.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 158

 Score =  144 bits (363), Expect = 3e-32
 Identities = 86/167 (51%), Positives = 113/167 (67%), Gaps = 12/167 (7%)
 Frame = +3

Query: 132 MRFLKRIAGIFGLLKDE---RELESEESGDTHDREIK-----EELPLPLPRGQRKGFSVQ 287
           MR L+RIAG  G +KDE   + LE EE+   H  + +     +E  LP     RKGF V 
Sbjct: 1   MRLLRRIAGFLGFVKDESRDQPLEEEENDSDHYNQPRFSSNFQESGLP-----RKGFGVP 55

Query: 288 VPV---HNQLGPLLTPSNNLNDGGVQGLRWYARRLRIDEDGDVADEFLDEIVPEVVEMPS 458
           V V     QLGPLL PS++  DGGVQGLRWYA+RL+IDEDGDVADEFL+E+  E     S
Sbjct: 56  VQVAVDRPQLGPLLVPSSS-GDGGVQGLRWYAKRLKIDEDGDVADEFLEEVSRET---SS 111

Query: 459 NMDDQ-RPVSKFEVKYRTRPAKVRKQVISIDGKLQQSVEYQGRLQFV 596
           ++D+Q + + +F+ KY  RPA+++ QVI+ DGK+QQ VE+QGRLQ+V
Sbjct: 112 SVDNQHKSLPRFQFKYNARPARIKNQVITNDGKIQQCVEHQGRLQWV 158


>ref|XP_004148488.1| PREDICTED: uncharacterized protein LOC101221247 [Cucumis sativus]
           gi|449529407|ref|XP_004171691.1| PREDICTED:
           uncharacterized protein LOC101227854 [Cucumis sativus]
          Length = 156

 Score =  131 bits (330), Expect = 2e-28
 Identities = 77/164 (46%), Positives = 103/164 (62%), Gaps = 9/164 (5%)
 Frame = +3

Query: 132 MRFLKRIAGIFGLLKDE----RELESEESGDTH--DREIKEELPLPLPRGQRKGFSVQVP 293
           MRF ++IAGI G  KD+    +  + +   DTH  DR   +   LP     R+GF V V 
Sbjct: 1   MRFFRKIAGILGFSKDDSHDVKNEDDDVDSDTHPPDRVHMQATGLP-----RRGFGVPVQ 55

Query: 294 V---HNQLGPLLTPSNNLNDGGVQGLRWYARRLRIDEDGDVADEFLDEIVPEVVEMPSNM 464
           V    +  GP+L PS++  DGGVQGL WYA+ LRIDEDGDVA++FL+E++PEV    S  
Sbjct: 56  VAVNRSNPGPILLPSSS-GDGGVQGLTWYAKGLRIDEDGDVAEQFLEEVIPEV--QTSTT 112

Query: 465 DDQRPVSKFEVKYRTRPAKVRKQVISIDGKLQQSVEYQGRLQFV 596
           +  +P  +F++  R RPAKV  QVI  +GKLQQ +E+QGRL  V
Sbjct: 113 NHPKPFPRFQINNRNRPAKVENQVILKEGKLQQCIEHQGRLLLV 156


Top