BLASTX nr result

ID: Coptis25_contig00011173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011173
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68624.1| hypothetical protein VITISV_010682 [Vitis vinifera]   163   4e-38
emb|CBI21048.3| unnamed protein product [Vitis vinifera]              162   6e-38
ref|XP_002285150.2| PREDICTED: uncharacterized protein LOC100266...   162   6e-38
ref|XP_002282244.1| PREDICTED: uncharacterized protein LOC100250...   160   3e-37
ref|XP_002527188.1| conserved hypothetical protein [Ricinus comm...   115   1e-23

>emb|CAN68624.1| hypothetical protein VITISV_010682 [Vitis vinifera]
          Length = 526

 Score =  163 bits (412), Expect = 4e-38
 Identities = 103/264 (39%), Positives = 135/264 (51%), Gaps = 14/264 (5%)
 Frame = -3

Query: 784 LVLGCTVRRASRSQRNNHPRAYLTPITQEPTPVSSRVAVNITHGGSSL------RPAHSV 623
           L LGC  RRASRSQRNN+PR YLTP TQEP  +S  +  N   G  +       R A  +
Sbjct: 137 LNLGCPQRRASRSQRNNNPRCYLTPSTQEPISISPSILENSPQGNHTTISQVMSRYATFI 196

Query: 622 KPTFSSHIVGS--PHTV--DNKPTVTHTFPFPLENLSPSASNQVSFGIHPSANVGRVYPL 455
           KP+  S I     PH+    N    T  F F  EN  PS +  +   ++P++N+  VYPL
Sbjct: 197 KPSSMSVIQPGLEPHSTAFHNNDCPTXKFLFSSENCPPSGNKCLQMEVYPASNLCAVYPL 256

Query: 454 YFGAHYQATDPQ----VVSHPPQGINSSEAVHGISQCQSIRRLTEKGFLQNFFMCDAVVN 287
           Y G   Q  + Q    V SHP         +               G +QN F     ++
Sbjct: 257 YDGNQLQCEESQCGFGVQSHPKSNPMEPAGM---------------GTIQNLF--SYAID 299

Query: 286 ASNRDTEAEWRRSAENSPVIECDLSLRLGPLSVPCASEETGCAHEVVDIGSSSSQEWDKS 107
            + + ++ ++    ENSP I+CDLSLRLGPLS+PC S E     E  D+GSS S+E  K 
Sbjct: 300 PTKKPSQTDFGHVTENSPKIDCDLSLRLGPLSIPCVSVENSWPQEFEDVGSSCSREGSKF 359

Query: 106 CDQSPRTSKEFCFFPRDSADDPLE 35
            D SPR  K+F FFPR + DDPL+
Sbjct: 360 SDLSPRVDKQFPFFPRGNTDDPLD 383


>emb|CBI21048.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  162 bits (411), Expect = 6e-38
 Identities = 103/264 (39%), Positives = 135/264 (51%), Gaps = 14/264 (5%)
 Frame = -3

Query: 784 LVLGCTVRRASRSQRNNHPRAYLTPITQEPTPVSSRVAVNITHGGSSL------RPAHSV 623
           L LGC  RRASRSQRNN+PR YLTP TQEP  +S  +  N   G  +       R A  +
Sbjct: 113 LNLGCPQRRASRSQRNNNPRCYLTPSTQEPISISPSILENSPQGNHTTISQVMSRYATFI 172

Query: 622 KPTFSSHIVGS--PHTV--DNKPTVTHTFPFPLENLSPSASNQVSFGIHPSANVGRVYPL 455
           KP+  S I     PH+    N    T  F F  EN  PS +  +   ++P++NV  VYPL
Sbjct: 173 KPSSMSVIQPGLEPHSTAFHNNDCPTSKFLFSSENCPPSGNKCLQMEVYPASNVCAVYPL 232

Query: 454 YFGAHYQATDPQ----VVSHPPQGINSSEAVHGISQCQSIRRLTEKGFLQNFFMCDAVVN 287
           Y G   Q  + Q    V SHP         +               G +QN F     ++
Sbjct: 233 YDGNQLQCEESQCGFGVQSHPKSNPMEPAGM---------------GTIQNLF--SYAID 275

Query: 286 ASNRDTEAEWRRSAENSPVIECDLSLRLGPLSVPCASEETGCAHEVVDIGSSSSQEWDKS 107
            + + ++ ++    ENSP I+CDLSLRLGPLS+PC S E     E  D+GSS S+E  K 
Sbjct: 276 PTKKPSQTDFGHVTENSPKIDCDLSLRLGPLSIPCVSVENSWPQEFEDVGSSCSREGSKF 335

Query: 106 CDQSPRTSKEFCFFPRDSADDPLE 35
            D SP+  K+F FFPR + DDPL+
Sbjct: 336 SDLSPQVDKQFPFFPRGNTDDPLD 359


>ref|XP_002285150.2| PREDICTED: uncharacterized protein LOC100266444 [Vitis vinifera]
          Length = 414

 Score =  162 bits (411), Expect = 6e-38
 Identities = 103/264 (39%), Positives = 135/264 (51%), Gaps = 14/264 (5%)
 Frame = -3

Query: 784 LVLGCTVRRASRSQRNNHPRAYLTPITQEPTPVSSRVAVNITHGGSSL------RPAHSV 623
           L LGC  RRASRSQRNN+PR YLTP TQEP  +S  +  N   G  +       R A  +
Sbjct: 113 LNLGCPQRRASRSQRNNNPRCYLTPSTQEPISISPSILENSPQGNHTTISQVMSRYATFI 172

Query: 622 KPTFSSHIVGS--PHTV--DNKPTVTHTFPFPLENLSPSASNQVSFGIHPSANVGRVYPL 455
           KP+  S I     PH+    N    T  F F  EN  PS +  +   ++P++NV  VYPL
Sbjct: 173 KPSSMSVIQPGLEPHSTAFHNNDCPTSKFLFSSENCPPSGNKCLQMEVYPASNVCAVYPL 232

Query: 454 YFGAHYQATDPQ----VVSHPPQGINSSEAVHGISQCQSIRRLTEKGFLQNFFMCDAVVN 287
           Y G   Q  + Q    V SHP         +               G +QN F     ++
Sbjct: 233 YDGNQLQCEESQCGFGVQSHPKSNPMEPAGM---------------GTIQNLF--SYAID 275

Query: 286 ASNRDTEAEWRRSAENSPVIECDLSLRLGPLSVPCASEETGCAHEVVDIGSSSSQEWDKS 107
            + + ++ ++    ENSP I+CDLSLRLGPLS+PC S E     E  D+GSS S+E  K 
Sbjct: 276 PTKKPSQTDFGHVTENSPKIDCDLSLRLGPLSIPCVSVENSWPQEFEDVGSSCSREGSKF 335

Query: 106 CDQSPRTSKEFCFFPRDSADDPLE 35
            D SP+  K+F FFPR + DDPL+
Sbjct: 336 SDLSPQVDKQFPFFPRGNTDDPLD 359


>ref|XP_002282244.1| PREDICTED: uncharacterized protein LOC100250879 [Vitis vinifera]
          Length = 424

 Score =  160 bits (405), Expect = 3e-37
 Identities = 102/260 (39%), Positives = 134/260 (51%), Gaps = 12/260 (4%)
 Frame = -3

Query: 784 LVLGCTVRRASRSQRNNHPRAYLTPITQEPTPVSSRVAVN-ITHGGSSLRPAHSVKP-TF 611
           L LGC   RASRSQR+N+PR+YLT  TQEPT VS RV  N +      L+P  +    TF
Sbjct: 113 LNLGCVPVRASRSQRHNNPRSYLTHRTQEPTSVSPRVLDNAVNERCPQLQPPSAGNQLTF 172

Query: 610 SSHIVGSPHTV---------DNKPTVTHTFPFPLENLSPSASNQVSFGIHPSANVGRVYP 458
               + S H V         +N    T  F FP EN    ++  ++   +   N G VYP
Sbjct: 173 GRLNMDSTHLVLDSDRHVTQNNSLATTRNFHFPYENFPLGSNQSMTVETNTPLNFGSVYP 232

Query: 457 LYFGAHYQATDPQVVSHPPQGINSSEAVHGISQCQSIRRLTEKGF-LQNFFMCDAVVNAS 281
           LY+G H+Q  +  +    P+  N++    G     SI   +E G  LQN F  D   N  
Sbjct: 233 LYYGTHFQNEESHLGFQMPETANANTVFVGAPIGTSIAEPSEMGIILQNLFSSDGTENVL 292

Query: 280 NRDTEAEWRRSAENSPVIECDLSLRLGPLSVPCASEETGCAHEVVDIGSSSSQEWDKSCD 101
           N++ +  +R +    PV ECDLSLRLG  S PC  +E   A +  D+GSSSSQE  K   
Sbjct: 293 NKNAQENFRDTCGKEPVAECDLSLRLGLSSDPCMRKEKCSAPDTEDVGSSSSQEGAKVSG 352

Query: 100 QSPRTSKEFCFFPRDSADDP 41
            SP  SK FCFFP ++A+ P
Sbjct: 353 LSPGKSKGFCFFPSETANSP 372


>ref|XP_002527188.1| conserved hypothetical protein [Ricinus communis]
           gi|223533453|gb|EEF35201.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 373

 Score =  115 bits (287), Expect = 1e-23
 Identities = 78/261 (29%), Positives = 124/261 (47%), Gaps = 13/261 (4%)
 Frame = -3

Query: 784 LVLGCTVRRASRSQRNNHPRAYLTPITQEPTPVSSRVA----------VNITHGGSSL-- 641
           L LGC   RASRSQR+++PR+YL+P   EP P + R+           ++     S L  
Sbjct: 113 LNLGCIPVRASRSQRHSNPRSYLSPRMHEPVPAALRIVERANDKQCPQLSPPQSSSQLNF 172

Query: 640 -RPAHSVKPTFSSHIVGSPHTVDNKPTVTHTFPFPLENLSPSASNQVSFGIHPSANVGRV 464
            RP  +V  T          T  +    + ++P   +N+S  +S  +S  I+   N+G V
Sbjct: 173 ARPTTAVNSTLPVSESNCHLTESSNIDASCSYPLLYDNISLGSSQLMSKEINKQLNLGSV 232

Query: 463 YPLYFGAHYQATDPQVVSHPPQGINSSEAVHGISQCQSIRRLTEKGFLQNFFMCDAVVNA 284
           YPLY+G +Y    P + S  P+  NS+    G     S     E     +F  C +   +
Sbjct: 233 YPLYYGNNYHIKQPHLASQVPEK-NSNTIFVGTPISTSAAEPAEMSVFHDFLTCPSAEIS 291

Query: 283 SNRDTEAEWRRSAENSPVIECDLSLRLGPLSVPCASEETGCAHEVVDIGSSSSQEWDKSC 104
           + R ++A+   + E    ++CDLSLRLG  +    + +     E  D+GSS+SQ+  KS 
Sbjct: 292 AKRISQADLGNTHEKPSGVQCDLSLRLGLFTDLSVNMKRSLVQETEDVGSSNSQDRSKSS 351

Query: 103 DQSPRTSKEFCFFPRDSADDP 41
           +   + +KE  F P  + +DP
Sbjct: 352 NFYLQKNKELFFSPSRNTNDP 372


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