BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011172
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...    83   2e-14
emb|CBI41008.3| unnamed protein product [Vitis vinifera]               83   2e-14
emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]    83   2e-14
ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...    82   5e-14
gb|AFK44188.1| unknown [Medicago truncatula]                           74   1e-11

>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial [Vitis vinifera]
          Length = 383

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 9/85 (10%)
 Frame = -2

Query: 230 KNLTTLVENFKKCSEIGRFRSPHLAYEKTIARQ---------QQVLEHQKKKFDDIKQGF 78
           +NL  LV+ FKK SE+ RFR+    YE+T+ R          +++LE QKK  D  ++GF
Sbjct: 37  RNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGF 96

Query: 77  AMRLISLYWKAGMFDHALKLFDELP 3
           A+RLISLY K+GMFDHA K+FDE+P
Sbjct: 97  AVRLISLYGKSGMFDHAFKVFDEMP 121


>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 9/85 (10%)
 Frame = -2

Query: 230 KNLTTLVENFKKCSEIGRFRSPHLAYEKTIARQ---------QQVLEHQKKKFDDIKQGF 78
           +NL  LV+ FKK SE+ RFR+    YE+T+ R          +++LE QKK  D  ++GF
Sbjct: 45  RNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGF 104

Query: 77  AMRLISLYWKAGMFDHALKLFDELP 3
           A+RLISLY K+GMFDHA K+FDE+P
Sbjct: 105 AVRLISLYGKSGMFDHAFKVFDEMP 129


>emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
          Length = 383

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 9/85 (10%)
 Frame = -2

Query: 230 KNLTTLVENFKKCSEIGRFRSPHLAYEKTIARQ---------QQVLEHQKKKFDDIKQGF 78
           +NL  LV+ FKK SE+ RFR+    YE+T+ R          +++LE QKK  D  ++GF
Sbjct: 37  RNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGF 96

Query: 77  AMRLISLYWKAGMFDHALKLFDELP 3
           A+RLISLY K+GMFDHA K+FDE+P
Sbjct: 97  AVRLISLYGKSGMFDHAFKVFDEMP 121


>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Vitis vinifera]
          Length = 382

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 9/85 (10%)
 Frame = -2

Query: 230 KNLTTLVENFKKCSEIGRFRSPHLAYEKTIARQ---------QQVLEHQKKKFDDIKQGF 78
           +NL  LV+ FKK SE+ RFR+    YE+T+ R          +++LE QKK  D  ++GF
Sbjct: 37  RNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGF 96

Query: 77  AMRLISLYWKAGMFDHALKLFDELP 3
           A+RLI+LY K+GMFDHA K+FDE+P
Sbjct: 97  AVRLITLYGKSGMFDHAFKVFDEMP 121


>gb|AFK44188.1| unknown [Medicago truncatula]
          Length = 376

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 40/85 (47%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
 Frame = -2

Query: 230 KNLTTLVENFKKCSEIGRFRSPHLAYEKTIARQ---------QQVLEHQKKKFDDIKQGF 78
           +NL TLVE FKK S+I RFR  +  YE T+ R          + ++EHQK   D   +GF
Sbjct: 31  QNLKTLVEKFKKASDIDRFRKKNGIYEDTVRRLAGAKRFRWVRDIIEHQKSYADISNEGF 90

Query: 77  AMRLISLYWKAGMFDHALKLFDELP 3
           + RLI+LY K+ M  HA KLFDE+P
Sbjct: 91  SARLITLYGKSNMHRHAQKLFDEMP 115