BLASTX nr result

ID: Coptis25_contig00011170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011170
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...    57   4e-06
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    57   5e-06
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    56   8e-06

>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
 Frame = +2

Query: 380 LAYIEPIFNDGVLEIEE--EILEHGAKEWEDKVVGFFLDKKLPY----SIVEKKWSLKGQ 541
           L +  P   DG + +    ++ E G + W+  +VG F+ +KLPY    SI ++ WS  G 
Sbjct: 125 LHFAPPTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFMGQKLPYPVVNSIAKRIWSSYGL 184

Query: 542 LDI-SLDGDMFYFGFHNVEDRDYVLDEGYFHMMGKLFIIRKW 664
           L++ S D   F F F +V+    VL+   +HM     ++++W
Sbjct: 185 LEVLSSDNGFFIFNFDSVDRATNVLERAPWHMANMPLVLKRW 226


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
 Frame = +2

Query: 380 LAYIEPIFNDGVLEIEE--EILEHGAKEWEDKVVGFFLDKKLPY----SIVEKKWSLKGQ 541
           L +  P   DG +++    ++ E G + W+  +VG F+ +KLPY    SI ++ WS  G 
Sbjct: 125 LHFAPPTMTDGRVKVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGL 184

Query: 542 LDI-SLDGDMFYFGFHNVEDRDYVLDEGYFHMMGKLFIIRKW 664
            ++ S D   F F F +V+    VL+   +HM  +  ++++W
Sbjct: 185 SEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRW 226


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
 Frame = +2

Query: 380 LAYIEPIFNDGVLEIEE--EILEHGAKEWEDKVVGFFLDKKLPY----SIVEKKWSLKGQ 541
           L +  P   DG + +    ++ E G + W+  +VG F+ +KLPY    SI ++ WS  G 
Sbjct: 125 LHFAPPTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGL 184

Query: 542 LDI-SLDGDMFYFGFHNVEDRDYVLDEGYFHMMGKLFIIRKW 664
            ++ S D   F F F +V+    VL+   +HM  +  ++++W
Sbjct: 185 SEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRW 226


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