BLASTX nr result

ID: Coptis25_contig00011166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011166
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003579376.1| PREDICTED: uncharacterized protein LOC100829...    65   6e-09
ref|XP_002268993.1| PREDICTED: NEDD8 ultimate buster 1 [Vitis vi...    65   8e-09
ref|XP_004173432.1| PREDICTED: LOW QUALITY PROTEIN: NEDD8 ultima...    62   5e-08
ref|XP_004139279.1| PREDICTED: NEDD8 ultimate buster 1-like [Cuc...    62   5e-08
ref|NP_178939.2| ubiquitin-associated (UBA)/TS-N domain-containi...    62   6e-08

>ref|XP_003579376.1| PREDICTED: uncharacterized protein LOC100829250 [Brachypodium
           distachyon]
          Length = 577

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/65 (50%), Positives = 42/65 (64%)
 Frame = -2

Query: 198 WSVELTDQAGLKAQLESESDYLGLMQGLMFHSMAKVLIAKKMYKEALDVLAIEEKAFSRC 19
           ++++L DQ+G K    S  D   L   LM H  AKVLI K MYKEALDVL + E+AFS C
Sbjct: 133 FNLDLEDQSGQKVMFGSVDDMKALKMALMLHQKAKVLIKKDMYKEALDVLIMAEEAFSLC 192

Query: 18  DTELL 4
           D +L+
Sbjct: 193 DPKLI 197


>ref|XP_002268993.1| PREDICTED: NEDD8 ultimate buster 1 [Vitis vinifera]
           gi|296084548|emb|CBI25569.3| unnamed protein product
           [Vitis vinifera]
          Length = 552

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 30/65 (46%), Positives = 48/65 (73%)
 Frame = -2

Query: 198 WSVELTDQAGLKAQLESESDYLGLMQGLMFHSMAKVLIAKKMYKEALDVLAIEEKAFSRC 19
           +++EL DQ+G K  L SE+D   +M GLM H+ AK +I K+ YK+AL+VL++ E+AFS C
Sbjct: 119 FNIELEDQSGQKVHLGSETDQRAVMMGLMLHANAKQMIKKENYKDALEVLSMGEEAFSLC 178

Query: 18  DTELL 4
           + +++
Sbjct: 179 NPKVI 183


>ref|XP_004173432.1| PREDICTED: LOW QUALITY PROTEIN: NEDD8 ultimate buster 1-like,
           partial [Cucumis sativus]
          Length = 382

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/65 (46%), Positives = 45/65 (69%)
 Frame = -2

Query: 198 WSVELTDQAGLKAQLESESDYLGLMQGLMFHSMAKVLIAKKMYKEALDVLAIEEKAFSRC 19
           +++EL DQ+G K    SE+D   +M GLM H+ AK LI K  YK+AL+VL + E+AF+ C
Sbjct: 20  FNMELEDQSGQKVNFGSETDQKAIMMGLMLHANAKQLIRKGNYKDALEVLVMGEEAFTLC 79

Query: 18  DTELL 4
           + +L+
Sbjct: 80  NPKLI 84


>ref|XP_004139279.1| PREDICTED: NEDD8 ultimate buster 1-like [Cucumis sativus]
          Length = 556

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/65 (46%), Positives = 45/65 (69%)
 Frame = -2

Query: 198 WSVELTDQAGLKAQLESESDYLGLMQGLMFHSMAKVLIAKKMYKEALDVLAIEEKAFSRC 19
           +++EL DQ+G K    SE+D   +M GLM H+ AK LI K  YK+AL+VL + E+AF+ C
Sbjct: 121 FNMELEDQSGQKVNFGSETDQKAIMMGLMLHANAKQLIRKGNYKDALEVLVMGEEAFTLC 180

Query: 18  DTELL 4
           + +L+
Sbjct: 181 NPKLI 185


>ref|NP_178939.2| ubiquitin-associated (UBA)/TS-N domain-containing protein
           [Arabidopsis thaliana] gi|63147404|gb|AAY34175.1|
           At2g12550 [Arabidopsis thaliana]
           gi|330251110|gb|AEC06204.1| ubiquitin-associated
           (UBA)/TS-N domain-containing protein [Arabidopsis
           thaliana]
          Length = 562

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/65 (44%), Positives = 44/65 (67%)
 Frame = -2

Query: 198 WSVELTDQAGLKAQLESESDYLGLMQGLMFHSMAKVLIAKKMYKEALDVLAIEEKAFSRC 19
           +++EL DQ G K Q  +E+D    M GLM H+ AK LI  +MY +A++VLA+ E++F  C
Sbjct: 119 YNIELEDQGGHKVQFGTETDQSAAMMGLMLHTKAKSLIEIEMYSDAVEVLAMAEESFLLC 178

Query: 18  DTELL 4
           D ++L
Sbjct: 179 DPKIL 183


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