BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011163
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274917.2| PREDICTED: dihydroorotase, mitochondrial-lik...   239   1e-61
emb|CBI21866.3| unnamed protein product [Vitis vinifera]              227   9e-58
ref|XP_002517898.1| Dihydroorotase, mitochondrial precursor, put...   222   2e-56
gb|ABQ41358.1| mitochondrial dihydroorotase [Brassica napus]          219   3e-55
ref|XP_002869797.1| mitochondrial dihydroorotase [Arabidopsis ly...   214   5e-54

>ref|XP_002274917.2| PREDICTED: dihydroorotase, mitochondrial-like [Vitis vinifera]
          Length = 377

 Score =  239 bits (611), Expect = 1e-61
 Identities = 117/151 (77%), Positives = 131/151 (86%), Gaps = 1/151 (0%)
 Frame = +2

Query: 77  PCKVLNFPYGKVGWPRRVNTR-VRMEVSLTKPDDWHLHLRDGDLLETVVSHSASHFGRAI 253
           PCK    P+ ++  P +V  +  RME+SLT+PDDWHLHLRDGDLLE VVSHSASHFGR I
Sbjct: 8   PCKASILPFARIEVPNQVKVKGARMELSLTQPDDWHLHLRDGDLLEAVVSHSASHFGRGI 67

Query: 254 VMPNLKPPVTTTAAALAYRESILKALPSSSDFEPLMTLYLTDKTHPDEIKHARNSGMVFA 433
           VMPNLKPP+TTTAAA+AYRESILKALP++ DF PLMTLYLTDKT P+EIK ARNSG+VFA
Sbjct: 68  VMPNLKPPITTTAAAVAYRESILKALPANCDFTPLMTLYLTDKTSPNEIKLARNSGVVFA 127

Query: 434 VKLYPAGATTNSQDGVTDLIGNCLPVLKEMV 526
           VKLYPAGATTNSQDGVTDL G CLPVL+EMV
Sbjct: 128 VKLYPAGATTNSQDGVTDLFGKCLPVLEEMV 158


>emb|CBI21866.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  227 bits (578), Expect = 9e-58
 Identities = 110/127 (86%), Positives = 119/127 (93%)
 Frame = +2

Query: 146 MEVSLTKPDDWHLHLRDGDLLETVVSHSASHFGRAIVMPNLKPPVTTTAAALAYRESILK 325
           ME+SLT+PDDWHLHLRDGDLLE VVSHSASHFGR IVMPNLKPP+TTTAAA+AYRESILK
Sbjct: 1   MELSLTQPDDWHLHLRDGDLLEAVVSHSASHFGRGIVMPNLKPPITTTAAAVAYRESILK 60

Query: 326 ALPSSSDFEPLMTLYLTDKTHPDEIKHARNSGMVFAVKLYPAGATTNSQDGVTDLIGNCL 505
           ALP++ DF PLMTLYLTDKT P+EIK ARNSG+VFAVKLYPAGATTNSQDGVTDL G CL
Sbjct: 61  ALPANCDFTPLMTLYLTDKTSPNEIKLARNSGVVFAVKLYPAGATTNSQDGVTDLFGKCL 120

Query: 506 PVLKEMV 526
           PVL+EMV
Sbjct: 121 PVLEEMV 127


>ref|XP_002517898.1| Dihydroorotase, mitochondrial precursor, putative [Ricinus
           communis] gi|223542880|gb|EEF44416.1| Dihydroorotase,
           mitochondrial precursor, putative [Ricinus communis]
          Length = 398

 Score =  222 bits (566), Expect = 2e-56
 Identities = 109/150 (72%), Positives = 125/150 (83%), Gaps = 4/150 (2%)
 Frame = +2

Query: 89  LNFPYGKVGWPRRVNTRV----RMEVSLTKPDDWHLHLRDGDLLETVVSHSASHFGRAIV 256
           L FPY   G  +++  R      ME+++T+PDDWHLHLRDG++LE VV HSASHFGRAI+
Sbjct: 30  LKFPYTNNGGFKQLKCRASLLSNMELTITRPDDWHLHLRDGEMLEAVVPHSASHFGRAII 89

Query: 257 MPNLKPPVTTTAAALAYRESILKALPSSSDFEPLMTLYLTDKTHPDEIKHARNSGMVFAV 436
           MPNLKPP+TT  AALAYRESILKALP++SDF PLMTLYLTD T P+EIK AR SG+VFAV
Sbjct: 90  MPNLKPPITTAVAALAYRESILKALPANSDFSPLMTLYLTDTTSPNEIKLARRSGVVFAV 149

Query: 437 KLYPAGATTNSQDGVTDLIGNCLPVLKEMV 526
           KLYPAGATTNSQDGVTDL G CLPVL+EMV
Sbjct: 150 KLYPAGATTNSQDGVTDLFGKCLPVLEEMV 179


>gb|ABQ41358.1| mitochondrial dihydroorotase [Brassica napus]
          Length = 374

 Score =  219 bits (557), Expect = 3e-55
 Identities = 104/129 (80%), Positives = 117/129 (90%)
 Frame = +2

Query: 140 VRMEVSLTKPDDWHLHLRDGDLLETVVSHSASHFGRAIVMPNLKPPVTTTAAALAYRESI 319
           VRM +++T+PDDWHLHLRDGDLL+ VV HS SHF RAIVMPNLKPPVT+TAAA+ YRESI
Sbjct: 34  VRMGLTITQPDDWHLHLRDGDLLQAVVPHSVSHFRRAIVMPNLKPPVTSTAAAITYRESI 93

Query: 320 LKALPSSSDFEPLMTLYLTDKTHPDEIKHARNSGMVFAVKLYPAGATTNSQDGVTDLIGN 499
           +KALP+ S F+PLMTLYLTDKTHPDEIK AR SG+V+AVKLYPAGATTNSQDGVTDL G 
Sbjct: 94  MKALPTGSSFDPLMTLYLTDKTHPDEIKLARESGVVYAVKLYPAGATTNSQDGVTDLFGK 153

Query: 500 CLPVLKEMV 526
           CLPVL+EMV
Sbjct: 154 CLPVLEEMV 162


>ref|XP_002869797.1| mitochondrial dihydroorotase [Arabidopsis lyrata subsp. lyrata]
           gi|297315633|gb|EFH46056.1| mitochondrial dihydroorotase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 378

 Score =  214 bits (546), Expect = 5e-54
 Identities = 107/135 (79%), Positives = 119/135 (88%), Gaps = 1/135 (0%)
 Frame = +2

Query: 125 RVNTR-VRMEVSLTKPDDWHLHLRDGDLLETVVSHSASHFGRAIVMPNLKPPVTTTAAAL 301
           +V TR VRME+++T+PDDWHLHLRD DLL  VV HSAS F RAIVMPNLKPPVTTTAAA+
Sbjct: 26  KVKTRAVRMELTITQPDDWHLHLRDADLLHAVVPHSASIFKRAIVMPNLKPPVTTTAAAV 85

Query: 302 AYRESILKALPSSSDFEPLMTLYLTDKTHPDEIKHARNSGMVFAVKLYPAGATTNSQDGV 481
           AYR+SI+KALP  S F+PLMTLYLTDKT PDEIK AR SG+V+AVKLYPAGATTNSQDGV
Sbjct: 86  AYRDSIMKALPYGSSFDPLMTLYLTDKTQPDEIKLARESGVVYAVKLYPAGATTNSQDGV 145

Query: 482 TDLIGNCLPVLKEMV 526
           TDL G CLPVL+EMV
Sbjct: 146 TDLFGKCLPVLEEMV 160