BLASTX nr result

ID: Coptis25_contig00011162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011162
         (1809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270614.1| PREDICTED: probable WRKY transcription facto...   246   3e-77
gb|AEQ29021.1| WRKY8, partial [Panax quinquefolius]                   231   9e-75
gb|AEQ29025.1| WRKY35 [Panax quinquefolius]                           230   9e-75
ref|XP_002306823.1| predicted protein [Populus trichocarpa] gi|2...   228   1e-74
gb|AFK46919.1| unknown [Medicago truncatula]                          226   1e-73

>ref|XP_002270614.1| PREDICTED: probable WRKY transcription factor 74-like [Vitis
            vinifera]
          Length = 362

 Score =  246 bits (629), Expect(2) = 3e-77
 Identities = 150/318 (47%), Positives = 179/318 (56%), Gaps = 11/318 (3%)
 Frame = -1

Query: 1560 SCHRVLDVLSKPLDQNGYRNLXXXXXXXXXXXXXXVSLLSNGLGHGRVRKLKNLQVQPPF 1381
            SCHRVL  L +P DQ  YRNL              VSLL+NG GH RVRK + L+     
Sbjct: 14   SCHRVLSFLCQPQDQVQYRNLMMETEEAVFKFKRVVSLLNNGFGHERVRKFRRLRSS--L 71

Query: 1380 PQNIFLDSPNTLPPDSSSTKPVQFLQSDYQKNQIIEVGGSVG-------KMFLENTALDM 1222
            PQ+IFL++PN  P  + S KP+Q L +++ +N + E+            K+FLE+ A D+
Sbjct: 72   PQSIFLETPNYKP--NPSPKPLQLLPTNFLENPLPEIDSKAKSSLQITPKIFLESQASDI 129

Query: 1221 GSVSKSTISFVHQRPSPTPYXXXXXXXXXXXXXXXXXXXXXXXXQ--MKFQADMIHRRSD 1048
             S  K  +  V Q+PS                            +  MK+QADM++ RS+
Sbjct: 130  VSSVKPPLQIVQQKPSQHYQFLQQQHHHHHHQQQQQQIQRIQFQKQQMKYQADMMYSRSN 189

Query: 1047 SGLSLKFDSSSCTPTMXXXXXXXXXXSLDGSVANLDGNSFHLIGAPQSS--NSHPTHXXX 874
            SG++LKFD SSCTPTM          S+DGSVANLDGNSFHLIG PQ S  NSH      
Sbjct: 190  SGINLKFDGSSCTPTMSSTRSFISSLSMDGSVANLDGNSFHLIGVPQLSDPNSHQPRRRC 249

Query: 873  XXXXXXXXXXXXXXXXXXXXXXXXKLRVKRSIKVPAISNKIADIPPDEYSWRKYGQKPIK 694
                                     LRVKRSIKVPAISNK+ADIPPDEYSWRKYGQKPIK
Sbjct: 250  SGRGEDGSVKCGSSGKCHCSKRRK-LRVKRSIKVPAISNKVADIPPDEYSWRKYGQKPIK 308

Query: 693  GSPHPRGYYKCSSMRGCP 640
            GSPHPRGYYKCSSMRGCP
Sbjct: 309  GSPHPRGYYKCSSMRGCP 326



 Score = 70.5 bits (171), Expect(2) = 3e-77
 Identities = 32/42 (76%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
 Frame = -2

Query: 569 SMRGCPARKHVERCLDEPAMLIVTYEGEHNHPR-MPTQVANT 447
           SMRGCPARKHVERCL++P+MLIVTYEGEHNH R + +Q A+T
Sbjct: 321 SMRGCPARKHVERCLEDPSMLIVTYEGEHNHSRLLSSQSAHT 362


>gb|AEQ29021.1| WRKY8, partial [Panax quinquefolius]
          Length = 342

 Score =  231 bits (590), Expect(2) = 9e-75
 Identities = 141/309 (45%), Positives = 177/309 (57%), Gaps = 2/309 (0%)
 Frame = -1

Query: 1560 SCHRVLDVLSKPLDQNGYRNLXXXXXXXXXXXXXXVSLLSNGLGHGRVRKLKNLQVQPPF 1381
            SCHRVL ++S+P DQ  YRNL              VSLL+ GLGH RVRK++  ++Q PF
Sbjct: 13   SCHRVLSLISQPQDQIQYRNLVVETGEAVLKFEKVVSLLNAGLGHARVRKIE--KIQTPF 70

Query: 1380 PQNIFLDSPNTLPPDSSSTKPVQFLQSDYQKNQIIEVGGSV-GKMFLENTALDMGSVSKS 1204
            PQNI LD+P   P      K +Q L ++     I + G +V   + L N++L++ S  K+
Sbjct: 71   PQNILLDNPIGRP--DYQPKAIQLLPANSLDTPIHDNGSNVRSTLTLGNSSLELSSNGKN 128

Query: 1203 TISFVHQRPSPTPYXXXXXXXXXXXXXXXXXXXXXXXXQMKFQADMIHRRSDSGLSLKFD 1024
            ++    Q P P+ Y                         +K QA+M+ RRS+SG++L FD
Sbjct: 129  SLQIPQQTP-PSNYHFLQQKFQLQQQQ------------LKQQAEMMFRRSNSGINLNFD 175

Query: 1023 SSSCTPTMXXXXXXXXXXSLDGSVANLDGNSFHLIGAPQS-SNSHPTHXXXXXXXXXXXX 847
            SS+CTPTM          S+DGSVAN++GN+FHLIGA +S   S   H            
Sbjct: 176  SSTCTPTMSSTRSFISSLSVDGSVANMEGNAFHLIGATRSLDQSSYQHKRRCSAKGDDGS 235

Query: 846  XXXXXXXXXXXXXXXKLRVKRSIKVPAISNKIADIPPDEYSWRKYGQKPIKGSPHPRGYY 667
                           K RVKRSIKVPAISNK+ADIPPDEYSWRKYGQKPIKGSPHPRGYY
Sbjct: 236  VKCGSSGRCHCSKKRKHRVKRSIKVPAISNKLADIPPDEYSWRKYGQKPIKGSPHPRGYY 295

Query: 666  KCSSMRGCP 640
            KCSSMRGCP
Sbjct: 296  KCSSMRGCP 304



 Score = 77.4 bits (189), Expect(2) = 9e-75
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = -2

Query: 569 SMRGCPARKHVERCLDEPAMLIVTYEGEHNHPRMPTQ 459
           SMRGCPARKHVERCL++P+MLIVTYEGEHNHPR+P Q
Sbjct: 299 SMRGCPARKHVERCLEDPSMLIVTYEGEHNHPRIPVQ 335


>gb|AEQ29025.1| WRKY35 [Panax quinquefolius]
          Length = 339

 Score =  230 bits (587), Expect(2) = 9e-75
 Identities = 141/309 (45%), Positives = 176/309 (56%), Gaps = 2/309 (0%)
 Frame = -1

Query: 1560 SCHRVLDVLSKPLDQNGYRNLXXXXXXXXXXXXXXVSLLSNGLGHGRVRKLKNLQVQPPF 1381
            SCHRVL ++S+P DQ  YRNL              VSLL+ GLGH RVRK++  ++Q PF
Sbjct: 13   SCHRVLSLISQPQDQIQYRNLVVETGEAVLKFEKVVSLLNAGLGHARVRKIE--KIQTPF 70

Query: 1380 PQNIFLDSPNTLPPDSSSTKPVQFLQSDYQKNQIIEVGGSV-GKMFLENTALDMGSVSKS 1204
            PQNI LD+P   P      K +Q L ++     I + G +V   + L N++L++ S  K+
Sbjct: 71   PQNILLDNPIGRP--DYQPKAIQLLPANSLDTPIHDNGSNVRSTLTLGNSSLELSSNGKN 128

Query: 1203 TISFVHQRPSPTPYXXXXXXXXXXXXXXXXXXXXXXXXQMKFQADMIHRRSDSGLSLKFD 1024
            ++    Q P P+ Y                         +K QA+M+ RRS+SG++L FD
Sbjct: 129  SLQIPQQTP-PSNYHFLQQKFQLQQQQ------------LKQQAEMMFRRSNSGVNLNFD 175

Query: 1023 SSSCTPTMXXXXXXXXXXSLDGSVANLDGNSFHLIGAPQS-SNSHPTHXXXXXXXXXXXX 847
            SS+CTPTM          S DGSVAN++GN+FHLIGA +S   S   H            
Sbjct: 176  SSTCTPTMSSTRSFISSSSADGSVANMEGNAFHLIGATRSLDQSSYQHKRRCSAKGDDGS 235

Query: 846  XXXXXXXXXXXXXXXKLRVKRSIKVPAISNKIADIPPDEYSWRKYGQKPIKGSPHPRGYY 667
                           K RVKRSIKVPAISNK+ADIPPDEYSWRKYGQKPIKGSPHPRGYY
Sbjct: 236  VKCGSSGRCYCSKKRKHRVKRSIKVPAISNKLADIPPDEYSWRKYGQKPIKGSPHPRGYY 295

Query: 666  KCSSMRGCP 640
            KCSSMRGCP
Sbjct: 296  KCSSMRGCP 304



 Score = 78.6 bits (192), Expect(2) = 9e-75
 Identities = 33/41 (80%), Positives = 37/41 (90%)
 Frame = -2

Query: 569 SMRGCPARKHVERCLDEPAMLIVTYEGEHNHPRMPTQVANT 447
           SMRGCPARKHVERCL++P+MLIVTYEGEHNHPR+P Q   T
Sbjct: 299 SMRGCPARKHVERCLEDPSMLIVTYEGEHNHPRIPVQSTTT 339


>ref|XP_002306823.1| predicted protein [Populus trichocarpa] gi|222856272|gb|EEE93819.1|
            predicted protein [Populus trichocarpa]
          Length = 347

 Score =  228 bits (580), Expect(2) = 1e-74
 Identities = 146/311 (46%), Positives = 177/311 (56%), Gaps = 4/311 (1%)
 Frame = -1

Query: 1560 SCHRVLDVLSKPLDQNGYRNLXXXXXXXXXXXXXXVSLLSNGLGHGRVRKLKNLQVQPPF 1381
            SCHRV+ +LS+P DQ  YRNL              VSLL+ GLGH RVRKLK L    P 
Sbjct: 14   SCHRVISLLSQPQDQVQYRNLMVETGEAVFRFKKVVSLLNTGLGHARVRKLKKLPT--PL 71

Query: 1380 PQNIFLDSPNTLPPDSSSTKPVQFLQSD-YQKNQIIEVGGSVGK--MFLENTALDMGSVS 1210
             Q+I LD+P  L      +K  QFLQS  Y ++Q I+  GS+ K  + L   +L++ S  
Sbjct: 72   SQSILLDNP--LSSTDHPSKTPQFLQSSSYLESQPIQELGSIAKNCLSLGTPSLELSSNG 129

Query: 1209 KSTISFVHQRPSPTPYXXXXXXXXXXXXXXXXXXXXXXXXQMKFQADMIHRRSDSGLSLK 1030
            K+ +    Q   PTP                         QMK QA+M+ R+S+SG+SL 
Sbjct: 130  KNPL----QLGQPTP----AAHYQFLQQQQLHRLQLQQQQQMKQQAEMMFRKSNSGISLN 181

Query: 1029 FDSSSCTPTMXXXXXXXXXXSLDGSVANLDGNSFHLIGAPQSSN-SHPTHXXXXXXXXXX 853
            FDSSSCTPTM          S+DG+VANL+G++FHL GA +SS+ S   H          
Sbjct: 182  FDSSSCTPTMSSTRSFISSLSIDGNVANLEGSAFHLTGAARSSDQSSQQHKRKCSGRGED 241

Query: 852  XXXXXXXXXXXXXXXXXKLRVKRSIKVPAISNKIADIPPDEYSWRKYGQKPIKGSPHPRG 673
                             K RVKRSIKVPAISNK+ADIPPD+YSWRKYGQKPIKGSPHPRG
Sbjct: 242  GSMKCGSSVRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRG 301

Query: 672  YYKCSSMRGCP 640
            YYKCSSMRGCP
Sbjct: 302  YYKCSSMRGCP 312



 Score = 80.9 bits (198), Expect(2) = 1e-74
 Identities = 34/41 (82%), Positives = 38/41 (92%)
 Frame = -2

Query: 569 SMRGCPARKHVERCLDEPAMLIVTYEGEHNHPRMPTQVANT 447
           SMRGCPARKHVERCL++P+MLIVTYEGEHNHPR+P Q  NT
Sbjct: 307 SMRGCPARKHVERCLEDPSMLIVTYEGEHNHPRIPAQSTNT 347


>gb|AFK46919.1| unknown [Medicago truncatula]
          Length = 360

 Score =  226 bits (576), Expect(2) = 1e-73
 Identities = 146/315 (46%), Positives = 177/315 (56%), Gaps = 8/315 (2%)
 Frame = -1

Query: 1560 SCHRVLDVLSKPLDQNGYRNLXXXXXXXXXXXXXXVSLLSNGLGHGRVRKLKNLQVQPPF 1381
            SCHRVL +LS+P DQ  +RNL              VSLL +GL H RVRKLKNLQ   P+
Sbjct: 14   SCHRVLSMLSQPRDQVHHRNLTVETGEAVNRFKKVVSLL-HGLDHSRVRKLKNLQ-NVPY 71

Query: 1380 PQNIFLDSPNTLPPD-SSSTKPVQFLQSDYQKNQIIEVGGSV-GKMFLENTALDMGSVSK 1207
            PQ  FLD+PN      +  TK V F Q+ Y +N + E+G ++   + L N +L++ S  K
Sbjct: 72   PQTAFLDNPNCKRNIINHHTKNVHFTQTTYPQNSVQELGSTLRNPLSLGNPSLELSSNGK 131

Query: 1206 STISFVHQRPSPTPYXXXXXXXXXXXXXXXXXXXXXXXXQ-----MKFQADMIHRRSDSG 1042
            S +    Q  S T Y                        Q     MK QA+M+ RR+ SG
Sbjct: 132  SPLHLAQQAAS-THYQFYQPQQQHHHQQQLQQQRLLMQQQQQQQQMKHQAEMMFRRNTSG 190

Query: 1041 LSLKFD-SSSCTPTMXXXXXXXXXXSLDGSVANLDGNSFHLIGAPQSSNSHPTHXXXXXX 865
            +SL FD ++S T TM          S+DGSVAN+DG+SFHLIGAP SS+ +  H      
Sbjct: 191  ISLNFDKATSSTLTMSSTRSFISSLSIDGSVANVDGSSFHLIGAPISSDQNSQHKRKCSA 250

Query: 864  XXXXXXXXXXXXXXXXXXXXXKLRVKRSIKVPAISNKIADIPPDEYSWRKYGQKPIKGSP 685
                                 K RVKRSIKVPAISNK+ADIPPD+YSWRKYGQKPIKGSP
Sbjct: 251  RGDEGSLKCSSSSKCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSP 310

Query: 684  HPRGYYKCSSMRGCP 640
            HPRGYYKCSSMRGCP
Sbjct: 311  HPRGYYKCSSMRGCP 325



 Score = 79.3 bits (194), Expect(2) = 1e-73
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = -2

Query: 569 SMRGCPARKHVERCLDEPAMLIVTYEGEHNHPRMPTQVAN 450
           SMRGCPARKHVERCLDEP ML+VTYEGEHNH ++PTQ AN
Sbjct: 320 SMRGCPARKHVERCLDEPTMLMVTYEGEHNHAKVPTQPAN 359


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