BLASTX nr result

ID: Coptis25_contig00011160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011160
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312461.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002525997.1| conserved hypothetical protein [Ricinus comm...    67   2e-09
ref|XP_002284995.1| PREDICTED: protein VAC14 homolog [Vitis vini...    66   3e-09
emb|CAN65293.1| hypothetical protein VITISV_014540 [Vitis vinifera]    66   3e-09
ref|XP_003530883.1| PREDICTED: protein VAC14 homolog [Glycine max]     65   8e-09

>ref|XP_002312461.1| predicted protein [Populus trichocarpa] gi|222852281|gb|EEE89828.1|
           predicted protein [Populus trichocarpa]
          Length = 725

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/52 (73%), Positives = 43/52 (82%), Gaps = 2/52 (3%)
 Frame = -3

Query: 218 FRQLVVFLVHKFWDDHSLLEKRGALIIRRLCVLLDAEQVGQVLG--LAGQVD 69
           FRQLVVFLVH F +DHSLLEKRGALIIRRLCVLLDAE++ + L   L G+ D
Sbjct: 411 FRQLVVFLVHNFRNDHSLLEKRGALIIRRLCVLLDAERIYRELSTILEGEAD 462


>ref|XP_002525997.1| conserved hypothetical protein [Ricinus communis]
           gi|223534729|gb|EEF36421.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 728

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/52 (73%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
 Frame = -3

Query: 218 FRQLVVFLVHKFWDDHSLLEKRGALIIRRLCVLLDAEQVGQVLG--LAGQVD 69
           FRQLVVFLVH F  D SLLEKRGALIIRRLCVLLDAE+V + L   L G+ D
Sbjct: 413 FRQLVVFLVHNFRIDISLLEKRGALIIRRLCVLLDAERVYRELSTILEGEAD 464


>ref|XP_002284995.1| PREDICTED: protein VAC14 homolog [Vitis vinifera]
           gi|297737634|emb|CBI26835.3| unnamed protein product
           [Vitis vinifera]
          Length = 727

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/52 (71%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
 Frame = -3

Query: 218 FRQLVVFLVHKFWDDHSLLEKRGALIIRRLCVLLDAEQVGQVLG--LAGQVD 69
           FR LVVFLVH F  D+SLLEKRGALIIRRLCVLLDAE+V + L   L G+ D
Sbjct: 412 FRHLVVFLVHNFRVDNSLLEKRGALIIRRLCVLLDAERVYRELSMILEGEAD 463


>emb|CAN65293.1| hypothetical protein VITISV_014540 [Vitis vinifera]
          Length = 727

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/52 (71%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
 Frame = -3

Query: 218 FRQLVVFLVHKFWDDHSLLEKRGALIIRRLCVLLDAEQVGQVLG--LAGQVD 69
           FR LVVFLVH F  D+SLLEKRGALIIRRLCVLLDAE+V + L   L G+ D
Sbjct: 412 FRHLVVFLVHNFRVDNSLLEKRGALIIRRLCVLLDAERVYRELSMILEGEAD 463


>ref|XP_003530883.1| PREDICTED: protein VAC14 homolog [Glycine max]
          Length = 722

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = -3

Query: 218 FRQLVVFLVHKFWDDHSLLEKRGALIIRRLCVLLDAEQV 102
           FRQLVVFLVH F  D+SLLEKRGALIIRRLCVLL+AE+V
Sbjct: 413 FRQLVVFLVHNFRVDNSLLEKRGALIIRRLCVLLNAERV 451


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