BLASTX nr result

ID: Coptis25_contig00011155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011155
         (1494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266063.2| PREDICTED: probable lysine-specific demethyl...   451   e-124
ref|XP_003555549.1| PREDICTED: probable lysine-specific demethyl...   438   e-120
ref|XP_003535393.1| PREDICTED: probable lysine-specific demethyl...   435   e-119
emb|CBI22382.3| unnamed protein product [Vitis vinifera]              432   e-118
ref|XP_002521976.1| transcription factor, putative [Ricinus comm...   422   e-115

>ref|XP_002266063.2| PREDICTED: probable lysine-specific demethylase JMJ14-like [Vitis
            vinifera]
          Length = 1271

 Score =  451 bits (1159), Expect = e-124
 Identities = 236/385 (61%), Positives = 277/385 (71%), Gaps = 13/385 (3%)
 Frame = +1

Query: 379  MGTECIRTCVKEEIVDPSVPPGFESLTSFILKKMDDCEVKMTSIPSVGVSESQPAEMAAK 558
            MGTE IR CVKEE +D  VPPGFESLTSF LK+++D E+    + S   SESQ  +M  +
Sbjct: 1    MGTELIRACVKEENLD--VPPGFESLTSFTLKRVEDNEITTPCLASTSGSESQSIKMETE 58

Query: 559  LDISDNAKLTRCLRRRPWINYNQLNNSSGEESDSEQIDQNIS-SRPQLPKGVVRGCTDCS 735
             DISD A ++R LRRRPWINY Q +NSS +ESDSE ++QN+   RP LPKGV+RGC +C 
Sbjct: 59   FDISDAANISRSLRRRPWINYGQFDNSSDDESDSEHLNQNLPFRRPCLPKGVIRGCLECI 118

Query: 736  NCQKVIARWHPKDACRPILGDAPVFYPTEEEFKDTLKYIASIRPRAERYGICRIVPPSSW 915
            +CQKV ARW P+DACRP L +APVFYP+EEEF+DTLKYIASIR RAE YGICRIVPPSSW
Sbjct: 119  HCQKVTARWCPEDACRPDLEEAPVFYPSEEEFEDTLKYIASIRSRAEPYGICRIVPPSSW 178

Query: 916  NPPCPLKEDNIWKHSRFSTRIQRVDKLQNRDSVVXXXXXXXXXXXXXXXCGEMGTDCGVN 1095
             PPCPLKE NIW+ S+F+TRIQRVDKLQNRDS+                C   G D G  
Sbjct: 179  KPPCPLKEKNIWEGSKFATRIQRVDKLQNRDSMRKMPRVQNQTRRKRRRCMGTGIDFGPG 238

Query: 1096 G----------GLMQPNGM-GSEFGFEPGPKITLEAFQEYANDFKGQYFQKEVDA-DSGG 1239
                       GL Q     G  FGFEPGP+ TL+AFQ+YA+DF+ QYF K  +A D  G
Sbjct: 239  TEDVLGTADVLGLGQVGSCDGETFGFEPGPEFTLDAFQKYADDFRAQYFSKNGNATDLRG 298

Query: 1240 SRNMLEKQWEPSVENIEGEYWRMVEKPTEEIEVLYGADLETGLFGSGFPKESSTMECSNY 1419
            +  + ++  EPSVENIEGEYWR+VEKPTEEIEVLYGADLETG FGSGFPK S+ +  S  
Sbjct: 299  NMTISQELREPSVENIEGEYWRIVEKPTEEIEVLYGADLETGDFGSGFPKVSNPVG-STS 357

Query: 1420 DNKYLNSGWNLNNFARLPGSVLSFE 1494
            D +Y  SGWNLNNF RLPGSVL+FE
Sbjct: 358  DERYTKSGWNLNNFPRLPGSVLAFE 382


>ref|XP_003555549.1| PREDICTED: probable lysine-specific demethylase JMJ14-like [Glycine
            max]
          Length = 1257

 Score =  438 bits (1127), Expect = e-120
 Identities = 226/383 (59%), Positives = 272/383 (71%), Gaps = 11/383 (2%)
 Frame = +1

Query: 379  MGTECIRTCVKEEIVD-PSVPPGFESLTSFILKKMDDCEVK----MTSIP-SVGVSESQP 540
            MGTE +R CVKE+  D PSVPPGFES TSF LKK+++ E +    MTS   S   SES  
Sbjct: 1    MGTELMRICVKEDNDDFPSVPPGFESYTSFSLKKVENNEKQDDKNMTSCSASTSASESPS 60

Query: 541  AEMAAKLDISDNAKLTRCLRRRPWINYNQLNNSSGEESDSEQIDQNISSRPQLPKGVVRG 720
             +    + + D AK+ R LRRRPWINY Q  N S E+ D E+ DQN SSRP LP+GV+RG
Sbjct: 61   TQAENDVQVGDTAKVPRSLRRRPWINYGQYENISDEDPDCERHDQNFSSRPCLPRGVIRG 120

Query: 721  CTDCSNCQKVIARWHPKDACRPILGDAPVFYPTEEEFKDTLKYIASIRPRAERYGICRIV 900
            C DCSNCQKV+ARW P+DA +P + DAPVFYPTEEEF+DTLKYI+SIR +AE YGICRIV
Sbjct: 121  CPDCSNCQKVVARWRPEDARKPNIEDAPVFYPTEEEFQDTLKYISSIRSKAEPYGICRIV 180

Query: 901  PPSSWNPPCPLKEDNIWKHSRFSTRIQRVDKLQNRDSVVXXXXXXXXXXXXXXXCGEMGT 1080
            PPSSW PPCPLKE +IW+ S+FSTR+QR+DKLQNRDS+                C  MG 
Sbjct: 181  PPSSWKPPCPLKEKSIWEGSKFSTRVQRIDKLQNRDSMRKMSKIQTNMKRKRRRCTRMGV 240

Query: 1081 D----CGVNGGLMQPNGMGSEFGFEPGPKITLEAFQEYANDFKGQYFQKEVDADS-GGSR 1245
            D     G N G  +       FGFEPGP+ TLE FQ YA DF+ +YF+K  +    G + 
Sbjct: 241  DNSTRTGPNAGFCEV----ERFGFEPGPEFTLETFQRYAEDFQLKYFRKNENVSHLGANT 296

Query: 1246 NMLEKQWEPSVENIEGEYWRMVEKPTEEIEVLYGADLETGLFGSGFPKESSTMECSNYDN 1425
             +L    EPSVENIEGEYWRMVE PTEEIEVLYGADLETG+FGSGFP +SS +  ++++ 
Sbjct: 297  TILNGTSEPSVENIEGEYWRMVESPTEEIEVLYGADLETGIFGSGFPSKSSQVGSASHE- 355

Query: 1426 KYLNSGWNLNNFARLPGSVLSFE 1494
            +Y+ SGWNLNNFARLPGS+LS+E
Sbjct: 356  QYIKSGWNLNNFARLPGSLLSYE 378


>ref|XP_003535393.1| PREDICTED: probable lysine-specific demethylase JMJ14-like [Glycine
            max]
          Length = 1257

 Score =  435 bits (1119), Expect = e-119
 Identities = 223/379 (58%), Positives = 268/379 (70%), Gaps = 7/379 (1%)
 Frame = +1

Query: 379  MGTECIRTCVKEEIVD-PSVPPGFESLTSFILKKMDDCEVK----MTSIP-SVGVSESQP 540
            MGTE +R CVKE+  D PSVPPGFES TSF LK+++  E +    MTS   S   SES  
Sbjct: 1    MGTELMRICVKEDNDDFPSVPPGFESYTSFSLKRVESNEKQDDKNMTSCSASTSASESPS 60

Query: 541  AEMAAKLDISDNAKLTRCLRRRPWINYNQLNNSSGEESDSEQIDQNISSRPQLPKGVVRG 720
             ++   +   D  K+ R LRRRPWINY Q  N S E+ D EQ+DQN SSRP LP+GV+RG
Sbjct: 61   TQVENDVQGGDTRKVPRSLRRRPWINYGQYENISDEDPDCEQLDQNFSSRPCLPRGVIRG 120

Query: 721  CTDCSNCQKVIARWHPKDACRPILGDAPVFYPTEEEFKDTLKYIASIRPRAERYGICRIV 900
            C DCS+CQKV+ARW P+DA RP + DAPVFYPTEEEF+DTLKYI+SIR RAE YGICRIV
Sbjct: 121  CPDCSHCQKVVARWRPEDARRPNIEDAPVFYPTEEEFQDTLKYISSIRSRAESYGICRIV 180

Query: 901  PPSSWNPPCPLKEDNIWKHSRFSTRIQRVDKLQNRDSVVXXXXXXXXXXXXXXXCGEMGT 1080
            PPSSW PPCPLKE +IW+ S+FSTR+QR+DKLQNR+S+                C  MG 
Sbjct: 181  PPSSWKPPCPLKEKSIWEGSKFSTRVQRIDKLQNRNSMRKMPKIQTNMKRKRRRCTRMGV 240

Query: 1081 DCGVNGGLMQPNGMGSEFGFEPGPKITLEAFQEYANDFKGQYFQKEVDADS-GGSRNMLE 1257
            D  +  G          FGFEPGP+ TLE FQ YA DF+ +YF+K  +    G +  +L 
Sbjct: 241  DNSIRTGPNAGFCEAERFGFEPGPEFTLETFQRYAEDFQLKYFRKNENVSHLGANTTILN 300

Query: 1258 KQWEPSVENIEGEYWRMVEKPTEEIEVLYGADLETGLFGSGFPKESSTMECSNYDNKYLN 1437
               EPSVENIEGEYWRMVE PTEEIEVLYGADLETG+FGSGFP +SS +  ++++ +Y+ 
Sbjct: 301  GTSEPSVENIEGEYWRMVESPTEEIEVLYGADLETGIFGSGFPSKSSQVGSASHE-QYIK 359

Query: 1438 SGWNLNNFARLPGSVLSFE 1494
            SGWNLNNFARLPGS+LS E
Sbjct: 360  SGWNLNNFARLPGSLLSHE 378


>emb|CBI22382.3| unnamed protein product [Vitis vinifera]
          Length = 1178

 Score =  432 bits (1110), Expect = e-118
 Identities = 225/373 (60%), Positives = 263/373 (70%), Gaps = 1/373 (0%)
 Frame = +1

Query: 379  MGTECIRTCVKEEIVDPSVPPGFESLTSFILKKMDDCEVKMTSIPSVGVSESQPAEMAAK 558
            MGTE IR CVKEE +D  VPPGFESLTSF LK+++D E+    + S   SESQ  +M  +
Sbjct: 1    MGTELIRACVKEENLD--VPPGFESLTSFTLKRVEDNEITTPCLASTSGSESQSIKMETE 58

Query: 559  LDISDNAKLTRCLRRRPWINYNQLNNSSGEESDSEQIDQNIS-SRPQLPKGVVRGCTDCS 735
             DISD A ++R LRRRPWINY Q +NSS +ESDSE ++QN+   RP LPKGV+RGC +C 
Sbjct: 59   FDISDAANISRSLRRRPWINYGQFDNSSDDESDSEHLNQNLPFRRPCLPKGVIRGCLECI 118

Query: 736  NCQKVIARWHPKDACRPILGDAPVFYPTEEEFKDTLKYIASIRPRAERYGICRIVPPSSW 915
            +CQKV ARW P+DACRP L +APVFYP+EEEF+DTLKYIASIR RAE YGICRIVPPSSW
Sbjct: 119  HCQKVTARWCPEDACRPDLEEAPVFYPSEEEFEDTLKYIASIRSRAEPYGICRIVPPSSW 178

Query: 916  NPPCPLKEDNIWKHSRFSTRIQRVDKLQNRDSVVXXXXXXXXXXXXXXXCGEMGTDCGVN 1095
             PPCPLKE NIW+ S+F+TRIQRVDKLQNRDS+                 G         
Sbjct: 179  KPPCPLKEKNIWEGSKFATRIQRVDKLQNRDSMRKMPRVQNQTRRKRRRFGSCD------ 232

Query: 1096 GGLMQPNGMGSEFGFEPGPKITLEAFQEYANDFKGQYFQKEVDADSGGSRNMLEKQWEPS 1275
                     G  FGFEPGP+ TL+AFQ+YA+DF+ QYF K  +A             +  
Sbjct: 233  ---------GETFGFEPGPEFTLDAFQKYADDFRAQYFSKNGNAT------------DLR 271

Query: 1276 VENIEGEYWRMVEKPTEEIEVLYGADLETGLFGSGFPKESSTMECSNYDNKYLNSGWNLN 1455
            VENIEGEYWR+VEKPTEEIEVLYGADLETG FGSGFPK S+ +  S  D +Y  SGWNLN
Sbjct: 272  VENIEGEYWRIVEKPTEEIEVLYGADLETGDFGSGFPKVSNPVG-STSDERYTKSGWNLN 330

Query: 1456 NFARLPGSVLSFE 1494
            NF RLPGSVL+FE
Sbjct: 331  NFPRLPGSVLAFE 343


>ref|XP_002521976.1| transcription factor, putative [Ricinus communis]
            gi|223538780|gb|EEF40380.1| transcription factor,
            putative [Ricinus communis]
          Length = 1202

 Score =  422 bits (1084), Expect = e-115
 Identities = 217/381 (56%), Positives = 265/381 (69%), Gaps = 14/381 (3%)
 Frame = +1

Query: 394  IRTCVKEEIVD-PSVPPGFESLTSFILKKMDDCE-------VKMTSIPSVGVSESQPAEM 549
            +R C+KEE  + PSVPPGFES  +F LK++ D E       V+ +S  S   SESQP +M
Sbjct: 1    MRVCIKEESDEIPSVPPGFESFAAFTLKRVQDSENHESQNIVRFSS--SSSASESQPVKM 58

Query: 550  AAKLDISDNAKLTRCLRRRPWINYNQLNNSSGEESDSEQIDQNISSRPQLPKGVVRGCTD 729
              + DI    K TR LRRR WINY QL N SG+ESDS +++Q+++ R  LPKGV+RGC  
Sbjct: 59   EMESDIGTVTKATRSLRRRAWINYGQLENCSGDESDSGKLNQDLTLRSHLPKGVIRGCAQ 118

Query: 730  CSNCQKVIARWHPKDACRPILGDAPVFYPTEEEFKDTLKYIASIRPRAERYGICRIVPPS 909
            C NCQKV ARWHP+ A +P L +APVFYPTEEEF+DT+KYIASIR +AE YGICRIVPP 
Sbjct: 119  CMNCQKVTARWHPEYARKPDLEEAPVFYPTEEEFEDTIKYIASIRLKAEPYGICRIVPPP 178

Query: 910  SWNPPCPLKEDNIWKHSRFSTRIQRVDKLQNRDSVVXXXXXXXXXXXXXXXCGEMGTDCG 1089
            SW PPCPLKE +IW+ S+F+TR+QRVDKLQNRDS+                C  M  DCG
Sbjct: 179  SWKPPCPLKEKSIWEGSKFATRVQRVDKLQNRDSMKKMSRMNNHTKKKRRRCMRMAVDCG 238

Query: 1090 VN----GGLMQPNGMGSE-FGFEPGPKITLEAFQEYANDFKGQYFQKEVDADSGG-SRNM 1251
             +     G +      +E FGFEPGP+ +L  FQ+YA+DFK QYF K     S   +   
Sbjct: 239  TDIGSISGCIDVGACEAESFGFEPGPQFSLNTFQKYADDFKAQYFTKNDSITSKAVNTAF 298

Query: 1252 LEKQWEPSVENIEGEYWRMVEKPTEEIEVLYGADLETGLFGSGFPKESSTMECSNYDNKY 1431
            L++ WEP+VENIEGEYWR+VEK TEEIEVLYGADLETG+FGSGFPK S  +  S+ + +Y
Sbjct: 299  LQENWEPTVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKTSGQVG-SDTNERY 357

Query: 1432 LNSGWNLNNFARLPGSVLSFE 1494
              SGWNLNNF RLPGSVLS+E
Sbjct: 358  AKSGWNLNNFPRLPGSVLSYE 378


Top