BLASTX nr result

ID: Coptis25_contig00011154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011154
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319654.1| jumonji domain protein [Populus trichocarpa]...   123   8e-32
ref|XP_002325772.1| jumonji domain protein [Populus trichocarpa]...   121   8e-32
ref|XP_002521976.1| transcription factor, putative [Ricinus comm...   118   6e-30
ref|XP_003555549.1| PREDICTED: probable lysine-specific demethyl...   118   9e-30
ref|XP_002266063.2| PREDICTED: probable lysine-specific demethyl...   112   8e-29

>ref|XP_002319654.1| jumonji domain protein [Populus trichocarpa]
           gi|222858030|gb|EEE95577.1| jumonji domain protein
           [Populus trichocarpa]
          Length = 923

 Score =  123 bits (309), Expect(2) = 8e-32
 Identities = 59/91 (64%), Positives = 65/91 (71%)
 Frame = +1

Query: 1   FKDTLKYIASIRPKAE*YGICRIVPPSSWNPPCPLKEDNIWKHSRFSTRIQWVDKLQNRD 180
           F+DTLKYIASIRPKAE YGICRIVPP SW PPCPLKE  IW+ S F+TR+Q VDKLQNRD
Sbjct: 29  FEDTLKYIASIRPKAEQYGICRIVPPPSWKPPCPLKEKTIWEGSTFATRVQRVDKLQNRD 88

Query: 181 SVVKRSIMHTXXXXXXXXCGEMGTDCGVNRG 273
           S+ KRS M          C  M  DCG + G
Sbjct: 89  SMRKRSTMSNHTRKKRRRCMSMAVDCGTDIG 119



 Score = 38.5 bits (88), Expect(2) = 8e-32
 Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = +3

Query: 306 GFELDPKITLEAFQEYANDFK*QYF*K-EVSADSGG 410
           GFE  P  TL+ FQ+YA+DFK QYF K E + + GG
Sbjct: 136 GFEPGPLFTLDTFQKYADDFKAQYFRKNENTINKGG 171


>ref|XP_002325772.1| jumonji domain protein [Populus trichocarpa]
           gi|222862647|gb|EEF00154.1| jumonji domain protein
           [Populus trichocarpa]
          Length = 756

 Score =  121 bits (304), Expect(2) = 8e-32
 Identities = 57/91 (62%), Positives = 65/91 (71%)
 Frame = +1

Query: 1   FKDTLKYIASIRPKAE*YGICRIVPPSSWNPPCPLKEDNIWKHSRFSTRIQWVDKLQNRD 180
           F+DTLKYIASIRPKAE YGICRIVPP SW PPCPLKE+ +W+ S F+TR+Q VDKLQNRD
Sbjct: 29  FEDTLKYIASIRPKAEQYGICRIVPPPSWKPPCPLKEETVWEGSTFATRVQRVDKLQNRD 88

Query: 181 SVVKRSIMHTXXXXXXXXCGEMGTDCGVNRG 273
           S+ K S M          C  M  DCG + G
Sbjct: 89  SMRKMSTMSNHTRKKRRRCMRMAIDCGADIG 119



 Score = 40.4 bits (93), Expect(2) = 8e-32
 Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +3

Query: 306 GFELDPKITLEAFQEYANDFK*QYF*K-EVSADSGGSRNML 425
           GFE  P  TL+ FQ+YA+DF  QYF K E + + GGS  ML
Sbjct: 136 GFEPGPLFTLDKFQKYADDFMAQYFKKDENTINKGGSMTML 176


>ref|XP_002521976.1| transcription factor, putative [Ricinus communis]
           gi|223538780|gb|EEF40380.1| transcription factor,
           putative [Ricinus communis]
          Length = 1202

 Score =  118 bits (296), Expect(2) = 6e-30
 Identities = 56/91 (61%), Positives = 66/91 (72%)
 Frame = +1

Query: 1   FKDTLKYIASIRPKAE*YGICRIVPPSSWNPPCPLKEDNIWKHSRFSTRIQWVDKLQNRD 180
           F+DT+KYIASIR KAE YGICRIVPP SW PPCPLKE +IW+ S+F+TR+Q VDKLQNRD
Sbjct: 152 FEDTIKYIASIRLKAEPYGICRIVPPPSWKPPCPLKEKSIWEGSKFATRVQRVDKLQNRD 211

Query: 181 SVVKRSIMHTXXXXXXXXCGEMGTDCGVNRG 273
           S+ K S M+         C  M  DCG + G
Sbjct: 212 SMKKMSRMNNHTKKKRRRCMRMAVDCGTDIG 242



 Score = 37.4 bits (85), Expect(2) = 6e-30
 Identities = 18/33 (54%), Positives = 22/33 (66%)
 Frame = +3

Query: 306 GFELDPKITLEAFQEYANDFK*QYF*KEVSADS 404
           GFE  P+ +L  FQ+YA+DFK QYF K  S  S
Sbjct: 259 GFEPGPQFSLNTFQKYADDFKAQYFTKNDSITS 291


>ref|XP_003555549.1| PREDICTED: probable lysine-specific demethylase JMJ14-like [Glycine
           max]
          Length = 1257

 Score =  118 bits (296), Expect(2) = 9e-30
 Identities = 60/105 (57%), Positives = 70/105 (66%), Gaps = 4/105 (3%)
 Frame = +1

Query: 1   FKDTLKYIASIRPKAE*YGICRIVPPSSWNPPCPLKEDNIWKHSRFSTRIQWVDKLQNRD 180
           F+DTLKYI+SIR KAE YGICRIVPPSSW PPCPLKE +IW+ S+FSTR+Q +DKLQNRD
Sbjct: 157 FQDTLKYISSIRSKAEPYGICRIVPPSSWKPPCPLKEKSIWEGSKFSTRVQRIDKLQNRD 216

Query: 181 SVVKRSIMHTXXXXXXXXCGEMGTD----CGVNRGLMQPNGMGSE 303
           S+ K S + T        C  MG D     G N G  +    G E
Sbjct: 217 SMRKMSKIQTNMKRKRRRCTRMGVDNSTRTGPNAGFCEVERFGFE 261



 Score = 36.6 bits (83), Expect(2) = 9e-30
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +3

Query: 306 GFELDPKITLEAFQEYANDFK*QYF*KEVSADSGGSRNML 425
           GFE  P+ TLE FQ YA DF+ +YF K  +    G+   +
Sbjct: 259 GFEPGPEFTLETFQRYAEDFQLKYFRKNENVSHLGANTTI 298


>ref|XP_002266063.2| PREDICTED: probable lysine-specific demethylase JMJ14-like [Vitis
           vinifera]
          Length = 1271

 Score =  112 bits (279), Expect(2) = 8e-29
 Identities = 55/87 (63%), Positives = 62/87 (71%)
 Frame = +1

Query: 1   FKDTLKYIASIRPKAE*YGICRIVPPSSWNPPCPLKEDNIWKHSRFSTRIQWVDKLQNRD 180
           F+DTLKYIASIR +AE YGICRIVPPSSW PPCPLKE NIW+ S+F+TRIQ VDKLQNRD
Sbjct: 150 FEDTLKYIASIRSRAEPYGICRIVPPSSWKPPCPLKEKNIWEGSKFATRIQRVDKLQNRD 209

Query: 181 SVVKRSIMHTXXXXXXXXCGEMGTDCG 261
           S+ K   +          C   G D G
Sbjct: 210 SMRKMPRVQNQTRRKRRRCMGTGIDFG 236



 Score = 40.0 bits (92), Expect(2) = 8e-29
 Identities = 19/36 (52%), Positives = 26/36 (72%)
 Frame = +3

Query: 291 NGLGVGFELDPKITLEAFQEYANDFK*QYF*KEVSA 398
           +G   GFE  P+ TL+AFQ+YA+DF+ QYF K  +A
Sbjct: 258 DGETFGFEPGPEFTLDAFQKYADDFRAQYFSKNGNA 293


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