BLASTX nr result

ID: Coptis25_contig00011139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011139
         (774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA70968.2| amino acid transporter [Solanum tuberosum]            347   1e-93
emb|CAD92450.1| amino acid permease 6 [Brassica napus]                340   2e-91
ref|XP_002285557.1| PREDICTED: amino acid permease 6 [Vitis vini...   340   2e-91
ref|NP_199774.1| amino acid permease 6 [Arabidopsis thaliana] gi...   340   3e-91
ref|XP_002865746.1| hypothetical protein ARALYDRAFT_495022 [Arab...   339   4e-91

>emb|CAA70968.2| amino acid transporter [Solanum tuberosum]
          Length = 469

 Score =  347 bits (891), Expect = 1e-93
 Identities = 172/225 (76%), Positives = 197/225 (87%), Gaps = 1/225 (0%)
 Frame = +2

Query: 101 MASEQNKSSFYMEHEPVTMENGHGLKNFDDDGREKRTGTLMTASAHIITAVIGSGVLSLA 280
           MA E  K++ Y+ +E   +ENG   KNFDDDGREKRTGTL+TASAHIITAVIGSGVLSLA
Sbjct: 1   MAPEFQKNAMYVSNE---LENGDVQKNFDDDGREKRTGTLLTASAHIITAVIGSGVLSLA 57

Query: 281 WAIAQLGWVAGPAILMAFSMITWFTSTLLADCYRSPDPVTGKRNYTYMDVVKANLGGMKN 460
           WAIAQLGWVAGPA+L AFS IT+FTSTLLADCYRSP P++GKRNYTYMDVV+++LGG+K 
Sbjct: 58  WAIAQLGWVAGPAVLFAFSFITYFTSTLLADCYRSPGPISGKRNYTYMDVVRSHLGGVKV 117

Query: 461 KLCGVAQYGNLVGVTIGYTITASISMAAIKRSNCYHKNGHQ-GCSTSNNPFMIIFASIQI 637
            LCG+AQY NLVGVTIGYTITASISM A+KRSNC+HKNGH+  CS  + P+MIIFA IQI
Sbjct: 118 TLCGIAQYANLVGVTIGYTITASISMVAVKRSNCFHKNGHEASCSIESYPYMIIFAVIQI 177

Query: 638 ILSQIPNFHKLSWLSIVAAVMSFTYSGIGLGLSIAKLAENGHHVR 772
           +LSQIPNFHKLSWLSI+AAVMSFTY+ IGLGLSIAK +  GHHV+
Sbjct: 178 VLSQIPNFHKLSWLSILAAVMSFTYASIGLGLSIAKASGVGHHVK 222


>emb|CAD92450.1| amino acid permease 6 [Brassica napus]
          Length = 481

 Score =  340 bits (873), Expect = 2e-91
 Identities = 167/219 (76%), Positives = 189/219 (86%), Gaps = 1/219 (0%)
 Frame = +2

Query: 119 KSSFYMEHEPVTMENGHGLKNFDDDGREKRTGTLMTASAHIITAVIGSGVLSLAWAIAQL 298
           K S ++E      ++G   KNFDDDGR+KRTGT MT SAHIITAVIGSGVLSLAWAIAQL
Sbjct: 3   KKSMFIEQSFTDHKSGDMNKNFDDDGRQKRTGTWMTGSAHIITAVIGSGVLSLAWAIAQL 62

Query: 299 GWVAGPAILMAFSMITWFTSTLLADCYRSPDPVTGKRNYTYMDVVKANLGGMKNKLCGVA 478
           GWVAGPA+LMAFS IT+FTST+LADCYRSPDPVTGKRNYTYM+VV++ LGG K  LCG+A
Sbjct: 63  GWVAGPAVLMAFSFITYFTSTMLADCYRSPDPVTGKRNYTYMEVVRSYLGGRKVMLCGLA 122

Query: 479 QYGNLVGVTIGYTITASISMAAIKRSNCYHKNGHQ-GCSTSNNPFMIIFASIQIILSQIP 655
           QYGNL+G+TIGYTITASISM A+KRSNC+HKNGH   CSTSN PFMIIFA IQI+LSQIP
Sbjct: 123 QYGNLIGITIGYTITASISMVAVKRSNCFHKNGHNVKCSTSNTPFMIIFACIQIVLSQIP 182

Query: 656 NFHKLSWLSIVAAVMSFTYSGIGLGLSIAKLAENGHHVR 772
           NFH LSWLSI+AAVMSF+Y+ IG+GLSIAK+A  G H R
Sbjct: 183 NFHNLSWLSILAAVMSFSYASIGIGLSIAKVAGGGVHAR 221


>ref|XP_002285557.1| PREDICTED: amino acid permease 6 [Vitis vinifera]
           gi|302142129|emb|CBI19332.3| unnamed protein product
           [Vitis vinifera]
          Length = 483

 Score =  340 bits (873), Expect = 2e-91
 Identities = 163/222 (73%), Positives = 194/222 (87%), Gaps = 1/222 (0%)
 Frame = +2

Query: 101 MASEQNKSSFYMEHEPVTMENGHGLKNFDDDGREKRTGTLMTASAHIITAVIGSGVLSLA 280
           MA   + ++ ++E  P T+E G   KN DDDGR KRTGTL+TASAHIITAVIGSGVLSLA
Sbjct: 1   MAGNLSTNTLFVEQAPETIEKGDIGKNLDDDGRFKRTGTLLTASAHIITAVIGSGVLSLA 60

Query: 281 WAIAQLGWVAGPAILMAFSMITWFTSTLLADCYRSPDPVTGKRNYTYMDVVKANLGGMKN 460
           W+I+QLGW+AGP +L+ FS IT+FTSTLLADCYRSPDP+TGKRNYTYMDVV+ANLGGMK 
Sbjct: 61  WSISQLGWIAGPVVLVVFSFITYFTSTLLADCYRSPDPITGKRNYTYMDVVRANLGGMKV 120

Query: 461 KLCGVAQYGNLVGVTIGYTITASISMAAIKRSNCYHKNGHQG-CSTSNNPFMIIFASIQI 637
           +LCG+AQYGNL+GVTIGYTITASISM A++RSNCYHK+GHQ  C+ S+ P+MIIFA IQI
Sbjct: 121 QLCGIAQYGNLIGVTIGYTITASISMVAVRRSNCYHKHGHQAKCNPSDYPYMIIFACIQI 180

Query: 638 ILSQIPNFHKLSWLSIVAAVMSFTYSGIGLGLSIAKLAENGH 763
           +LSQIPNFHKLSWLSI+AAVMSF+Y+ IG+GLSIA++A   H
Sbjct: 181 VLSQIPNFHKLSWLSILAAVMSFSYASIGIGLSIARVAGGAH 222


>ref|NP_199774.1| amino acid permease 6 [Arabidopsis thaliana]
           gi|75220393|sp|P92934.1|AAP6_ARATH RecName: Full=Amino
           acid permease 6; AltName: Full=Amino acid transporter
           AAP6 gi|1769887|emb|CAA65051.1| amino acid permease 6
           [Arabidopsis thaliana] gi|8809686|dbj|BAA97227.1| amino
           acid permease 6 [Arabidopsis thaliana]
           gi|110738094|dbj|BAF00980.1| amino acid permease 6
           [Arabidopsis thaliana] gi|332008455|gb|AED95838.1| amino
           acid permease 6 [Arabidopsis thaliana]
          Length = 481

 Score =  340 bits (871), Expect = 3e-91
 Identities = 168/221 (76%), Positives = 189/221 (85%), Gaps = 1/221 (0%)
 Frame = +2

Query: 113 QNKSSFYMEHEPVTMENGHGLKNFDDDGREKRTGTLMTASAHIITAVIGSGVLSLAWAIA 292
           + K S ++E      E G   KNFD+DGR+KRTGT MT SAHIITAVIGSGVLSLAWAIA
Sbjct: 2   EKKKSMFVEQSFPEHEIGDTNKNFDEDGRDKRTGTWMTGSAHIITAVIGSGVLSLAWAIA 61

Query: 293 QLGWVAGPAILMAFSMITWFTSTLLADCYRSPDPVTGKRNYTYMDVVKANLGGMKNKLCG 472
           QLGWVAGPA+LMAFS IT+FTST+LADCYRSPDPVTGKRNYTYM+VV++ LGG K +LCG
Sbjct: 62  QLGWVAGPAVLMAFSFITYFTSTMLADCYRSPDPVTGKRNYTYMEVVRSYLGGRKVQLCG 121

Query: 473 VAQYGNLVGVTIGYTITASISMAAIKRSNCYHKNGHQ-GCSTSNNPFMIIFASIQIILSQ 649
           +AQYGNL+G+TIGYTITASISM A+KRSNC+HKNGH   C+TSN PFMIIFA IQIILSQ
Sbjct: 122 LAQYGNLIGITIGYTITASISMVAVKRSNCFHKNGHNVKCATSNTPFMIIFAIIQIILSQ 181

Query: 650 IPNFHKLSWLSIVAAVMSFTYSGIGLGLSIAKLAENGHHVR 772
           IPNFH LSWLSI+AAVMSF Y+ IG+GLSIAK A  G HVR
Sbjct: 182 IPNFHNLSWLSILAAVMSFCYASIGVGLSIAKAAGGGEHVR 222


>ref|XP_002865746.1| hypothetical protein ARALYDRAFT_495022 [Arabidopsis lyrata subsp.
           lyrata] gi|297311581|gb|EFH42005.1| hypothetical protein
           ARALYDRAFT_495022 [Arabidopsis lyrata subsp. lyrata]
          Length = 507

 Score =  339 bits (869), Expect = 4e-91
 Identities = 168/221 (76%), Positives = 188/221 (85%), Gaps = 1/221 (0%)
 Frame = +2

Query: 113 QNKSSFYMEHEPVTMENGHGLKNFDDDGREKRTGTLMTASAHIITAVIGSGVLSLAWAIA 292
           + K S  +E      E G   KNFDDDGREKR+GT MT SAHIITAVIGSGVLSLAWAIA
Sbjct: 2   EKKKSMSVEQSYTDHEIGDINKNFDDDGREKRSGTWMTGSAHIITAVIGSGVLSLAWAIA 61

Query: 293 QLGWVAGPAILMAFSMITWFTSTLLADCYRSPDPVTGKRNYTYMDVVKANLGGMKNKLCG 472
           QLGWVAGPA+LMAFS IT+FTST+LADCYRSPDPVTGKRNYTYM+VV++ LGG K +LCG
Sbjct: 62  QLGWVAGPAVLMAFSFITYFTSTMLADCYRSPDPVTGKRNYTYMEVVRSYLGGRKVQLCG 121

Query: 473 VAQYGNLVGVTIGYTITASISMAAIKRSNCYHKNGHQ-GCSTSNNPFMIIFASIQIILSQ 649
           +AQYGNL+G+TIGYTITASISM A+KRSNC+HKNGH   C+TSN PFMI+FA IQIILSQ
Sbjct: 122 LAQYGNLIGITIGYTITASISMVAVKRSNCFHKNGHNVKCATSNTPFMIVFAIIQIILSQ 181

Query: 650 IPNFHKLSWLSIVAAVMSFTYSGIGLGLSIAKLAENGHHVR 772
           IPNFH LSWLSI+AAVMSF Y+ IG+GLSIAK A  G HVR
Sbjct: 182 IPNFHNLSWLSILAAVMSFCYASIGVGLSIAKAAGGGEHVR 222


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