BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011131
         (1658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529306.1| PREDICTED: mitochondrial inner membrane prot...   410   e-112
ref|XP_003529495.1| PREDICTED: mitochondrial inner membrane prot...   404   e-110
ref|XP_003542770.1| PREDICTED: mitochondrial inner membrane prot...   398   e-108
ref|XP_003622394.1| Mitochondrial inner membrane protein OXA1 [M...   398   e-108
ref|XP_002297976.1| inner membrane protein [Populus trichocarpa]...   391   e-106

>ref|XP_003529306.1| PREDICTED: mitochondrial inner membrane protein OXA1-like [Glycine
            max]
          Length = 431

 Score =  410 bits (1055), Expect = e-112
 Identities = 229/425 (53%), Positives = 283/425 (66%), Gaps = 6/425 (1%)
 Frame = -1

Query: 1529 MAYRRSLSIRVGFLRQRFNPSFTYILHDDDDKCQPSAADISRPQNRSFLQRGYHNSSMNT 1350
            MAYRR L IR   + +R +PSF+Y+LH D  K + +    S   +  F Q     SS+N 
Sbjct: 1    MAYRRCLLIRGNLVDRRCHPSFSYVLHSDQGKHENTNEKSSSGGDGDFTQTRSFGSSLN- 59

Query: 1349 ASAGIDSLFRRNGYXXXXXXXXXXXCNYSSNAIGEEADKIE-EYLNGVTEIISEKSVE-V 1176
               G    F  +             C Y S  + + +DKI  + +  V ++++  +++ V
Sbjct: 60   ---GPMGFFAHSRDRFLSPCSRYGFCRYMST-VNQGSDKISSDVMTDVADVLTNTTMDAV 115

Query: 1175 VSQVPXXXXXXXXXADSYFPVAALQYIIDGVHSFTGLNWWASIVLTTFMIRGCTVPLLIN 996
            VSQ P         ADS+ PV ALQY+ID VHS+TGLNWWA+IVLTT +IR  TVPLLIN
Sbjct: 116  VSQAPVVNEVAIAAADSFLPVQALQYVIDAVHSYTGLNWWAAIVLTTLLIRTATVPLLIN 175

Query: 995  QLKASSKLAKMRPELEEIKDQMQNMASDPKAVAEGQQRMSALFKQHGVTPFTPLKGILIS 816
            QLKA+SKL  MRP LEEIK QM+ +  DP AVA+GQQ+M  LFK++GV+PFTPLKG+ I 
Sbjct: 176  QLKATSKLTLMRPHLEEIKQQMEGLTMDPVAVAKGQQQMKKLFKEYGVSPFTPLKGLFIQ 235

Query: 815  GPIFVSFFLAISNMAEKVPSFKQGGAFWFTDLTTPDALYVFPILTALSFLITVEFNMQEG 636
            GPIFVSFFLAI+NMAEKVPSFK GGA WF DL+TPDALY+FP LTALSFLITVE NMQEG
Sbjct: 236  GPIFVSFFLAITNMAEKVPSFKHGGASWFIDLSTPDALYIFPALTALSFLITVECNMQEG 295

Query: 635  MEGNPMARTMKTFSRILGVLTVPFTMSFPKAIFCYWITSNIFSLMYGIVIKRPDVKKFLN 456
            MEGNP+A TMK  SR L VLTVPFTM FPKAIFCYW+TSN+FSL+YG+V+K P VKK L 
Sbjct: 296  MEGNPVAGTMKNVSRGLAVLTVPFTMGFPKAIFCYWVTSNLFSLVYGLVLKVPGVKKTLG 355

Query: 455  LPAFPVA---STPAPKPAFSVLSALKM-SNPAAEGPASLNTENXXXXXXXXXXXXXXSQR 288
            +P  PVA   +T AP+  FS+  ALK  ++    G +S+  E               SQR
Sbjct: 356  IPEIPVAPPTTTSAPQSPFSIFPALKQATSSTTNGQSSIPEEASKHSNKKISSSSVISQR 415

Query: 287  LRTLE 273
            LR+LE
Sbjct: 416  LRSLE 420


>ref|XP_003529495.1| PREDICTED: mitochondrial inner membrane protein OXA1-like [Glycine
            max]
          Length = 430

 Score =  404 bits (1038), Expect = e-110
 Identities = 215/406 (52%), Positives = 273/406 (67%), Gaps = 10/406 (2%)
 Frame = -1

Query: 1529 MAYRRSLSIRVGFLRQRFNPSFTYILHDDDDKCQ-PSAADISRPQNRSFLQRGYHNSSMN 1353
            MA+RR L IR   + ++ +PSF+Y+LH ++ K + P     S   + S  +R + NS   
Sbjct: 1    MAHRRCLLIRGNLMNRKCHPSFSYVLHSNEGKRECPDEKSSSAGISNSIQRRMFGNS--- 57

Query: 1352 TASAGIDSLFRRNGYXXXXXXXXXXXCNYSS-------NAIGEEADKIEEYLNGVTEIIS 1194
                 +D   R   Y             YS        + + + +DKI+  +  + +++ 
Sbjct: 58   -----VDGSMRFVSYSGQRMHSNRFLSPYSGYNFCRHMSTVNQGSDKID-IMTDIADVLK 111

Query: 1193 EKSVEVV-SQVPXXXXXXXXXADSYFPVAALQYIIDGVHSFTGLNWWASIVLTTFMIRGC 1017
            + +VE V SQ P         ADS  PV ALQYIID VHS+TGLNWWASIVLTT +IR  
Sbjct: 112  DTTVEAVTSQAPIVKEVAIAAADSALPVKALQYIIDAVHSYTGLNWWASIVLTTLLIRSA 171

Query: 1016 TVPLLINQLKASSKLAKMRPELEEIKDQMQNMASDPKAVAEGQQRMSALFKQHGVTPFTP 837
            TVPLLINQLKA+SKL  MRP +E+IK ++++ A DP AVAEGQ+RM  LFK++G +PFTP
Sbjct: 172  TVPLLINQLKATSKLTIMRPHMEKIKQEIEDKAMDPVAVAEGQKRMKKLFKEYGASPFTP 231

Query: 836  LKGILISGPIFVSFFLAISNMAEKVPSFKQGGAFWFTDLTTPDALYVFPILTALSFLITV 657
            LKG+ I GP+F+SFFLAI NMAEK+PSFK GGA+WF DLTTPD+LY+ P+LTALSFLITV
Sbjct: 232  LKGLFIQGPVFISFFLAIRNMAEKMPSFKHGGAYWFVDLTTPDSLYILPVLTALSFLITV 291

Query: 656  EFNMQEGMEGNPMARTMKTFSRILGVLTVPFTMSFPKAIFCYWITSNIFSLMYGIVIKRP 477
            E NMQEG+EGNP+A TMK FSR L VLTVPFTM FPKAIFCYWITSN+FSL+YG+V+K P
Sbjct: 292  ECNMQEGLEGNPVAGTMKKFSRGLAVLTVPFTMGFPKAIFCYWITSNLFSLVYGLVLKFP 351

Query: 476  DVKKFLNLPAFP-VASTPAPKPAFSVLSALKMSNPAAEGPASLNTE 342
             VKK L +P  P  A T  P+  FS+  ALK +  A  GP S+  E
Sbjct: 352  GVKKALRIPIIPQAAPTSGPQSPFSIFPALKQATSATNGPNSMPVE 397


>ref|XP_003542770.1| PREDICTED: mitochondrial inner membrane protein OXA1-like [Glycine
            max]
          Length = 431

 Score =  398 bits (1023), Expect = e-108
 Identities = 225/425 (52%), Positives = 280/425 (65%), Gaps = 6/425 (1%)
 Frame = -1

Query: 1529 MAYRRSLSIRVGFLRQRFNPSFTYILHDDDDKCQPSAADISRPQNRSFLQRGYHNSSMNT 1350
            MAYRR L IR   + +R + SF+Y+LH ++ K + +    S      F Q     SS+N 
Sbjct: 1    MAYRRCLLIRGSLVDRRCHLSFSYVLHSNEGKRERTNEKSSSGGVGDFTQTRSFGSSLN- 59

Query: 1349 ASAGIDSLFRRNGYXXXXXXXXXXXCNYSSNAIGEEADKI-EEYLNGVTEIISEKSVE-V 1176
               G    F  +             C Y S  +   +DKI  + +  V +++++ +++ V
Sbjct: 60   ---GQMGFFSPSRDRFLSPCTGYGFCQYMST-VNRGSDKIGSDVMTDVADVLADTTMDSV 115

Query: 1175 VSQVPXXXXXXXXXADSYFPVAALQYIIDGVHSFTGLNWWASIVLTTFMIRGCTVPLLIN 996
             SQ P         ADS+ PV ALQY+ID VH +TGLNWWA+IVLTT +IR  TVPLLIN
Sbjct: 116  ASQAPVVNEVAIAAADSFLPVQALQYVIDAVHFYTGLNWWAAIVLTTLLIRTATVPLLIN 175

Query: 995  QLKASSKLAKMRPELEEIKDQMQNMASDPKAVAEGQQRMSALFKQHGVTPFTPLKGILIS 816
            QLKA+SKL  MRP LEEIK +M+ +  DP AVA+GQQ+M  LFK++GV+PFTPLKG+ I 
Sbjct: 176  QLKATSKLTLMRPHLEEIKQEMEGLTMDPVAVAKGQQQMKKLFKEYGVSPFTPLKGLFIQ 235

Query: 815  GPIFVSFFLAISNMAEKVPSFKQGGAFWFTDLTTPDALYVFPILTALSFLITVEFNMQEG 636
            GPIFVSFFLAI+NMAEKVPSFK GGA WF DL+TPDALYVFP+LTALSFLITVE NMQEG
Sbjct: 236  GPIFVSFFLAITNMAEKVPSFKHGGASWFIDLSTPDALYVFPVLTALSFLITVECNMQEG 295

Query: 635  MEGNPMARTMKTFSRILGVLTVPFTMSFPKAIFCYWITSNIFSLMYGIVIKRPDVKKFLN 456
            MEGNP+A TMK  SR L VLTVPFTM FPKAIFCYW+TSN+FSL+YG+V+K P VKK L 
Sbjct: 296  MEGNPVAGTMKNVSRGLAVLTVPFTMGFPKAIFCYWVTSNLFSLVYGLVLKVPGVKKTLG 355

Query: 455  LPAFPVA---STPAPKPAFSVLSALKMSNPAA-EGPASLNTENXXXXXXXXXXXXXXSQR 288
            +P  PVA   +T A +  FS+  ALK +  A   G +S+  E               SQR
Sbjct: 356  IPEIPVAPPTTTSATQSPFSIFPALKQATSATRNGSSSIPDEASKHSNKKISSASVISQR 415

Query: 287  LRTLE 273
            LR+LE
Sbjct: 416  LRSLE 420


>ref|XP_003622394.1| Mitochondrial inner membrane protein OXA1 [Medicago truncatula]
            gi|355497409|gb|AES78612.1| Mitochondrial inner membrane
            protein OXA1 [Medicago truncatula]
          Length = 446

 Score =  398 bits (1022), Expect = e-108
 Identities = 213/401 (53%), Positives = 265/401 (66%), Gaps = 7/401 (1%)
 Frame = -1

Query: 1529 MAYRRSLSIR-VGFLRQRFNPSFTYILHDDDDKCQPSAADISRPQNRSFLQR---GYHNS 1362
            MAYRR L  R    + +R NPSFTYILH DD+  Q    D +   + SF Q    G+ NS
Sbjct: 1    MAYRRCLLQRGKNLIDRRCNPSFTYILHSDDEGKQRDQPDSAGRISNSFTQTRSFGFGNS 60

Query: 1361 SMNTASAGIDSLFRRNGYXXXXXXXXXXXCNYSSNAIGEEADKIEEYLNGVTEIISEKSV 1182
               +      S F    Y               S    +  DKI E    V  ++S+ +V
Sbjct: 61   LNGSMGFSPSSPFAAGYYNNFCRNM--------STTPDQGFDKITELTTDVAHVLSDTAV 112

Query: 1181 EVVSQ--VPXXXXXXXXXADSYFPVAALQYIIDGVHSFTGLNWWASIVLTTFMIRGCTVP 1008
            + +S    P         ADS+ PV  LQY ID VH++TGLNWW++IV+TT +IR  TVP
Sbjct: 113  DAISSQAAPVVSEVAIAAADSFLPVQVLQYAIDAVHTYTGLNWWSAIVVTTLLIRIATVP 172

Query: 1007 LLINQLKASSKLAKMRPELEEIKDQMQNMASDPKAVAEGQQRMSALFKQHGVTPFTPLKG 828
            LLINQLK +SKL  MRP LEE+K +M     DP+AVAEGQ++M  LFK++GVTPF+PLKG
Sbjct: 173  LLINQLKTTSKLTIMRPRLEELKAEMDGKTFDPQAVAEGQEKMKQLFKEYGVTPFSPLKG 232

Query: 827  ILISGPIFVSFFLAISNMAEKVPSFKQGGAFWFTDLTTPDALYVFPILTALSFLITVEFN 648
            +LI GP+F+SFFLAI+NMAEK+PSFK GGAFWFTDLTTPDALYVFP+LTALSFL+ VEFN
Sbjct: 233  LLIQGPVFISFFLAITNMAEKMPSFKHGGAFWFTDLTTPDALYVFPVLTALSFLVVVEFN 292

Query: 647  MQEGMEGNPMARTMKTFSRILGVLTVPFTMSFPKAIFCYWITSNIFSLMYGIVIKRPDVK 468
            MQEGMEGNPM  TMK FSR+L  L+VPFTMSFPKA+FCYW+TSN+FS  YG+V+K P VK
Sbjct: 293  MQEGMEGNPMGDTMKKFSRVLAFLSVPFTMSFPKALFCYWLTSNLFSFTYGMVLKVPGVK 352

Query: 467  KFLNLPAFPVAS-TPAPKPAFSVLSALKMSNPAAEGPASLN 348
            K L +P  P    T +P   FS+L  +K +  AA+  ++ N
Sbjct: 353  KTLGVPDLPPPDPTRSPPAPFSILEEIKKAASAAKAASAAN 393


>ref|XP_002297976.1| inner membrane protein [Populus trichocarpa]
            gi|222845234|gb|EEE82781.1| inner membrane protein
            [Populus trichocarpa]
          Length = 459

 Score =  391 bits (1004), Expect = e-106
 Identities = 216/420 (51%), Positives = 267/420 (63%), Gaps = 28/420 (6%)
 Frame = -1

Query: 1529 MAYRRSLSIRVGFLRQRFNPSFTYILHDDDDKCQP-SAADISRPQNRSFLQRGYHNSSM- 1356
            MAY RSLS R   +R+R+N SF+YILHDDD K         S+  +  F QR + +S   
Sbjct: 1    MAYVRSLSTRANIVRRRYNASFSYILHDDDRKHNSIEEGPSSKGMSNLFQQRSFGSSRKR 60

Query: 1355 ---NTASAGIDSLFRRNGYXXXXXXXXXXXCNYSSNAIGEEADKIEEYLNGVTEIISEKS 1185
               N A  G      R                   + IG  ++ IE  +N V +++++ +
Sbjct: 61   FDNNLAVFGF--FHNRRCLDLSLSPSIGVSFCRDMSTIGGGSENIE-LINDVADVLTDTT 117

Query: 1184 VEVVS-QVPXXXXXXXXXADSYFPVAALQYIIDGVHSFTGLNWWASIVLTTFMIRGCTVP 1008
             E VS Q P         ADSYFPVAALQ++ID VHSFTG NWWASI++TT +IRG TVP
Sbjct: 118  FEAVSAQAPVVNEVAIAAADSYFPVAALQHVIDAVHSFTGFNWWASIIVTTLLIRGATVP 177

Query: 1007 LLINQLKASSKLAKMRPELEEIKDQMQNMASDPKAVAEGQQRMSALFKQHGVTPFTPLKG 828
            LLINQLKA++KL  MRP LEEI+ QM + A DP A+AEGQ++M  LFK++GV+P TPLKG
Sbjct: 178  LLINQLKATTKLTLMRPHLEEIRQQMSDKAMDPMALAEGQKQMKKLFKEYGVSPLTPLKG 237

Query: 827  ILISGPIFVSFFLAISNMAEKVPSFKQGGAFWFTDLTTPDALYVFPILTALSFLITVEFN 648
            + I GPIFVSFFLAISNM EKVPSFK GGA+WF DLTTPD+LY+ PILT L+F ITVE N
Sbjct: 238  LFIQGPIFVSFFLAISNMTEKVPSFKSGGAYWFLDLTTPDSLYILPILTGLTFWITVECN 297

Query: 647  MQEGMEGNPMARTMKTFSRILGVLTVPFTMSFPKAIFCYWITSNIFSLMYGI-------- 492
            MQEG+EGNP+A TMK  SR+  V +VP TM FP AIFCYW+TSN+FSL YG+        
Sbjct: 298  MQEGLEGNPIAATMKKVSRVFAVASVPLTMGFPNAIFCYWVTSNLFSLFYGLGNLGSFNV 357

Query: 491  -------------VIKRPDVKKFLNLPAFPVA-STPAPKPAFSVLSALKMSNPAAEGPAS 354
                          +K P VKKFL LP  PVA ++  P  +F +L ALK    A + PAS
Sbjct: 358  QQLLDFCYFMNQQTLKAPGVKKFLGLPEIPVAPASTTPPSSFDLLEALKQQVAARQEPAS 417