BLASTX nr result
ID: Coptis25_contig00011130
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00011130 (861 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003529306.1| PREDICTED: mitochondrial inner membrane prot... 262 8e-68 ref|XP_003542770.1| PREDICTED: mitochondrial inner membrane prot... 261 2e-67 ref|XP_003529495.1| PREDICTED: mitochondrial inner membrane prot... 258 2e-66 ref|XP_003622394.1| Mitochondrial inner membrane protein OXA1 [M... 247 3e-63 ref|XP_002324680.1| inner membrane protein [Populus trichocarpa]... 246 5e-63 >ref|XP_003529306.1| PREDICTED: mitochondrial inner membrane protein OXA1-like [Glycine max] Length = 431 Score = 262 bits (669), Expect = 8e-68 Identities = 134/210 (63%), Positives = 157/210 (74%), Gaps = 4/210 (1%) Frame = +2 Query: 2 HGVTPFTPLKGIFISGPIFVSFFLAISNMAEKVPSFKQGGTFWFTDLTTPDALYIFPIMT 181 +GV+PFTPLKG+FI GPIFVSFFLAI+NMAEKVPSFK GG WF DL+TPDALYIFP +T Sbjct: 221 YGVSPFTPLKGLFIQGPIFVSFFLAITNMAEKVPSFKHGGASWFIDLSTPDALYIFPALT 280 Query: 182 ALGFLITVEFNMQEGMEGNPMAGTMKTFSRIIGVLTIPFTMSFPKAIFCYWITSNIFSLM 361 AL FLITVE NMQEGMEGNP+AGTMK SR + VLT+PFTM FPKAIFCYW+TSN+FSL+ Sbjct: 281 ALSFLITVECNMQEGMEGNPVAGTMKNVSRGLAVLTVPFTMGFPKAIFCYWVTSNLFSLV 340 Query: 362 YGIVIKRPDVKKFLNLHAFPV---TSTPAPKPAFSLLSALK-TSNPTAEGPASLNAENXX 529 YG+V+K P VKK L + PV T+T AP+ FS+ ALK ++ T G +S+ E Sbjct: 341 YGLVLKVPGVKKTLGIPEIPVAPPTTTSAPQSPFSIFPALKQATSSTTNGQSSIPEEASK 400 Query: 530 XXXXXXXXXXXXXQRLRILEKQVKGRKKNK 619 QRLR LEKQVKGRKKN+ Sbjct: 401 HSNKKISSSSVISQRLRSLEKQVKGRKKNQ 430 >ref|XP_003542770.1| PREDICTED: mitochondrial inner membrane protein OXA1-like [Glycine max] Length = 431 Score = 261 bits (666), Expect = 2e-67 Identities = 133/210 (63%), Positives = 157/210 (74%), Gaps = 4/210 (1%) Frame = +2 Query: 2 HGVTPFTPLKGIFISGPIFVSFFLAISNMAEKVPSFKQGGTFWFTDLTTPDALYIFPIMT 181 +GV+PFTPLKG+FI GPIFVSFFLAI+NMAEKVPSFK GG WF DL+TPDALY+FP++T Sbjct: 221 YGVSPFTPLKGLFIQGPIFVSFFLAITNMAEKVPSFKHGGASWFIDLSTPDALYVFPVLT 280 Query: 182 ALGFLITVEFNMQEGMEGNPMAGTMKTFSRIIGVLTIPFTMSFPKAIFCYWITSNIFSLM 361 AL FLITVE NMQEGMEGNP+AGTMK SR + VLT+PFTM FPKAIFCYW+TSN+FSL+ Sbjct: 281 ALSFLITVECNMQEGMEGNPVAGTMKNVSRGLAVLTVPFTMGFPKAIFCYWVTSNLFSLV 340 Query: 362 YGIVIKRPDVKKFLNLHAFPV---TSTPAPKPAFSLLSALK-TSNPTAEGPASLNAENXX 529 YG+V+K P VKK L + PV T+T A + FS+ ALK ++ T G +S+ E Sbjct: 341 YGLVLKVPGVKKTLGIPEIPVAPPTTTSATQSPFSIFPALKQATSATRNGSSSIPDEASK 400 Query: 530 XXXXXXXXXXXXXQRLRILEKQVKGRKKNK 619 QRLR LEKQVKGRKKNK Sbjct: 401 HSNKKISSASVISQRLRSLEKQVKGRKKNK 430 >ref|XP_003529495.1| PREDICTED: mitochondrial inner membrane protein OXA1-like [Glycine max] Length = 430 Score = 258 bits (658), Expect = 2e-66 Identities = 128/207 (61%), Positives = 151/207 (72%), Gaps = 1/207 (0%) Frame = +2 Query: 2 HGVTPFTPLKGIFISGPIFVSFFLAISNMAEKVPSFKQGGTFWFTDLTTPDALYIFPIMT 181 +G +PFTPLKG+FI GP+F+SFFLAI NMAEK+PSFK GG +WF DLTTPD+LYI P++T Sbjct: 224 YGASPFTPLKGLFIQGPVFISFFLAIRNMAEKMPSFKHGGAYWFVDLTTPDSLYILPVLT 283 Query: 182 ALGFLITVEFNMQEGMEGNPMAGTMKTFSRIIGVLTIPFTMSFPKAIFCYWITSNIFSLM 361 AL FLITVE NMQEG+EGNP+AGTMK FSR + VLT+PFTM FPKAIFCYWITSN+FSL+ Sbjct: 284 ALSFLITVECNMQEGLEGNPVAGTMKKFSRGLAVLTVPFTMGFPKAIFCYWITSNLFSLV 343 Query: 362 YGIVIKRPDVKKFLNLHAFP-VTSTPAPKPAFSLLSALKTSNPTAEGPASLNAENXXXXX 538 YG+V+K P VKK L + P T P+ FS+ ALK + GP S+ E Sbjct: 344 YGLVLKFPGVKKALRIPIIPQAAPTSGPQSPFSIFPALKQATSATNGPNSMPVE-PSKHP 402 Query: 539 XXXXXXXXXXQRLRILEKQVKGRKKNK 619 QRLR LEKQVKGRKKNK Sbjct: 403 KKKTSSSDVNQRLRRLEKQVKGRKKNK 429 >ref|XP_003622394.1| Mitochondrial inner membrane protein OXA1 [Medicago truncatula] gi|355497409|gb|AES78612.1| Mitochondrial inner membrane protein OXA1 [Medicago truncatula] Length = 446 Score = 247 bits (630), Expect = 3e-63 Identities = 123/224 (54%), Positives = 153/224 (68%), Gaps = 18/224 (8%) Frame = +2 Query: 2 HGVTPFTPLKGIFISGPIFVSFFLAISNMAEKVPSFKQGGTFWFTDLTTPDALYIFPIMT 181 +GVTPF+PLKG+ I GP+F+SFFLAI+NMAEK+PSFK GG FWFTDLTTPDALY+FP++T Sbjct: 222 YGVTPFSPLKGLLIQGPVFISFFLAITNMAEKMPSFKHGGAFWFTDLTTPDALYVFPVLT 281 Query: 182 ALGFLITVEFNMQEGMEGNPMAGTMKTFSRIIGVLTIPFTMSFPKAIFCYWITSNIFSLM 361 AL FL+ VEFNMQEGMEGNPM TMK FSR++ L++PFTMSFPKA+FCYW+TSN+FS Sbjct: 282 ALSFLVVVEFNMQEGMEGNPMGDTMKKFSRVLAFLSVPFTMSFPKALFCYWLTSNLFSFT 341 Query: 362 YGIVIKRPDVKKFLNLHAFPVTS-TPAPKPAFSLLSALKTSNPTAEGPASLNAENXXXXX 538 YG+V+K P VKK L + P T +P FS+L +K + A+ ++ NA + Sbjct: 342 YGMVLKVPGVKKTLGVPDLPPPDPTRSPPAPFSILEEIKKAASAAKAASAANAASAANGQ 401 Query: 539 XXXXXXXXXX-----------------QRLRILEKQVKGRKKNK 619 QRL+ LEKQVKGRKKNK Sbjct: 402 TSLPVESSKQPTKKISSSSSSSAAVISQRLKSLEKQVKGRKKNK 445 >ref|XP_002324680.1| inner membrane protein [Populus trichocarpa] gi|222866114|gb|EEF03245.1| inner membrane protein [Populus trichocarpa] Length = 310 Score = 246 bits (628), Expect = 5e-63 Identities = 125/209 (59%), Positives = 148/209 (70%), Gaps = 3/209 (1%) Frame = +2 Query: 2 HGVTPFTPLKGIFISGPIFVSFFLAISNMAEKVPSFKQGGTFWFTDLTTPDALYIFPIMT 181 HGV+PFTPLKG+FI P+F+SFFLAI+NMAEKVPSFK GG FWF DLTT D LYIFP++T Sbjct: 102 HGVSPFTPLKGLFIQAPVFISFFLAITNMAEKVPSFKSGGAFWFVDLTTADDLYIFPVLT 161 Query: 182 ALGFLITVEFNMQEGMEGNPMAGTMKTFSRIIGVLTIPFTMSFPKAIFCYWITSNIFSLM 361 AL FLITVE N QEGMEGNP AGTMK SR + ++P TMSFPKAIFCYWITSN+FSL Sbjct: 162 ALTFLITVECNTQEGMEGNPAAGTMKNVSRALAAASVPLTMSFPKAIFCYWITSNLFSLT 221 Query: 362 YGIVIKRPDVKKFLNLHAFPVT--STPAPKPAFSLLSALKTSNPTAEGPA-SLNAENXXX 532 YG+V+K P VK+FL + PV +T A +F L SA+K + + P SL E Sbjct: 222 YGLVLKAPGVKEFLGVPKVPVAPPTTAAKSSSFDLFSAIKQLSTARKEPTPSLPIEPPKL 281 Query: 533 XXXXXXXXXXXXQRLRILEKQVKGRKKNK 619 +R+R LEK+VKGRKKNK Sbjct: 282 FEHKKSSSSVITKRIRSLEKEVKGRKKNK 310