BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011121
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica...   237   8e-61
emb|CBI15516.3| unnamed protein product [Vitis vinifera]              237   8e-61
ref|XP_002520424.1| ATP-dependent RNA helicase, putative [Ricinu...   235   3e-60
ref|XP_002321501.1| predicted protein [Populus trichocarpa] gi|2...   233   2e-59
ref|XP_004160445.1| PREDICTED: probable ATP-dependent RNA helica...   232   2e-59

>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
           vinifera]
          Length = 1178

 Score =  237 bits (604), Expect = 8e-61
 Identities = 116/138 (84%), Positives = 129/138 (93%)
 Frame = -1

Query: 415 EKMQRFRRSLPSYNERDALLTTISRNQVVVITGETGCGKTTQVPQYILEAAIKAERGAAC 236
           +KMQ FRRSLP+Y ER+ALL  IS+NQVVV++GETGCGKTTQ+PQYILE+ I+A RGA C
Sbjct: 273 QKMQEFRRSLPAYKEREALLNAISQNQVVVVSGETGCGKTTQLPQYILESEIEAARGAFC 332

Query: 235 SIICTQPRRISAMAVSERVAVERGENLGESVGYKVRLEGIKGRDTRLLFCTTGILLRRLL 56
           SIICTQPRRISAM+VSERVA ERGE LGESVGYKVRLEG+KGRDTRLLFCTTGILLRRLL
Sbjct: 333 SIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLL 392

Query: 55  VDRNLKGVSHIIVDEIHE 2
           VDRNLKGV+H+IVDEIHE
Sbjct: 393 VDRNLKGVTHVIVDEIHE 410


>emb|CBI15516.3| unnamed protein product [Vitis vinifera]
          Length = 1057

 Score =  237 bits (604), Expect = 8e-61
 Identities = 116/138 (84%), Positives = 129/138 (93%)
 Frame = -1

Query: 415 EKMQRFRRSLPSYNERDALLTTISRNQVVVITGETGCGKTTQVPQYILEAAIKAERGAAC 236
           +KMQ FRRSLP+Y ER+ALL  IS+NQVVV++GETGCGKTTQ+PQYILE+ I+A RGA C
Sbjct: 152 QKMQEFRRSLPAYKEREALLNAISQNQVVVVSGETGCGKTTQLPQYILESEIEAARGAFC 211

Query: 235 SIICTQPRRISAMAVSERVAVERGENLGESVGYKVRLEGIKGRDTRLLFCTTGILLRRLL 56
           SIICTQPRRISAM+VSERVA ERGE LGESVGYKVRLEG+KGRDTRLLFCTTGILLRRLL
Sbjct: 212 SIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLL 271

Query: 55  VDRNLKGVSHIIVDEIHE 2
           VDRNLKGV+H+IVDEIHE
Sbjct: 272 VDRNLKGVTHVIVDEIHE 289


>ref|XP_002520424.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223540409|gb|EEF41979.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1058

 Score =  235 bits (599), Expect = 3e-60
 Identities = 116/138 (84%), Positives = 126/138 (91%)
 Frame = -1

Query: 415 EKMQRFRRSLPSYNERDALLTTISRNQVVVITGETGCGKTTQVPQYILEAAIKAERGAAC 236
           +KM  FR+SLP+Y ERDALL  IS NQVVV++GETGCGKTTQ+PQYILE+ I+A RG AC
Sbjct: 190 QKMAEFRQSLPAYKERDALLKAISENQVVVVSGETGCGKTTQLPQYILESEIEAARGGAC 249

Query: 235 SIICTQPRRISAMAVSERVAVERGENLGESVGYKVRLEGIKGRDTRLLFCTTGILLRRLL 56
           SIICTQPRRISAMAVSERVA ERGE LGESVGYKVRLEGIKGRDTRLLFCTTGILLRRLL
Sbjct: 250 SIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGIKGRDTRLLFCTTGILLRRLL 309

Query: 55  VDRNLKGVSHIIVDEIHE 2
           VDRNL GV+H+IVDEIHE
Sbjct: 310 VDRNLNGVTHVIVDEIHE 327


>ref|XP_002321501.1| predicted protein [Populus trichocarpa] gi|222868497|gb|EEF05628.1|
           predicted protein [Populus trichocarpa]
          Length = 1062

 Score =  233 bits (593), Expect = 2e-59
 Identities = 113/138 (81%), Positives = 127/138 (92%)
 Frame = -1

Query: 415 EKMQRFRRSLPSYNERDALLTTISRNQVVVITGETGCGKTTQVPQYILEAAIKAERGAAC 236
           +KM  FRRSLP+Y E+D LL  IS NQV+V++GETGCGKTTQ+PQYILE+ I+A RGAAC
Sbjct: 153 QKMIEFRRSLPAYKEKDVLLKAISENQVIVVSGETGCGKTTQLPQYILESEIEAARGAAC 212

Query: 235 SIICTQPRRISAMAVSERVAVERGENLGESVGYKVRLEGIKGRDTRLLFCTTGILLRRLL 56
           SIICTQPRRISAMAVSERVA ERGE LGESVGYKVRLEG++GRDTRLLFCTTGILLRRLL
Sbjct: 213 SIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGILLRRLL 272

Query: 55  VDRNLKGVSHIIVDEIHE 2
           +DRNLKGV+H+IVDEIHE
Sbjct: 273 LDRNLKGVTHVIVDEIHE 290


>ref|XP_004160445.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
           sativus]
          Length = 1231

 Score =  232 bits (592), Expect = 2e-59
 Identities = 113/138 (81%), Positives = 128/138 (92%)
 Frame = -1

Query: 415 EKMQRFRRSLPSYNERDALLTTISRNQVVVITGETGCGKTTQVPQYILEAAIKAERGAAC 236
           +KM  FR+SLP++ ER+ALL  IS NQVVV++GETGCGKTTQ+PQYILE+ I+A RGA+C
Sbjct: 302 QKMIEFRKSLPAFKEREALLKAISENQVVVVSGETGCGKTTQLPQYILESEIEAARGASC 361

Query: 235 SIICTQPRRISAMAVSERVAVERGENLGESVGYKVRLEGIKGRDTRLLFCTTGILLRRLL 56
           SIICTQPRRISAM+VSERVA ERGE LGESVGYKVRLEG+KGRDTRLLFCTTG+LLRRLL
Sbjct: 362 SIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGVLLRRLL 421

Query: 55  VDRNLKGVSHIIVDEIHE 2
           VDRNLKGVSH+IVDEIHE
Sbjct: 422 VDRNLKGVSHVIVDEIHE 439