BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011120
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001154411.1| DEA(D/H)-box RNA helicase family protein [Ar...   142   8e-53
ref|XP_002894123.1| helicase domain-containing protein [Arabidop...   144   8e-53
ref|NP_175298.2| DEA(D/H)-box RNA helicase family protein [Arabi...   142   8e-53
gb|AAG60124.1|AC073555_8 hypothetical protein [Arabidopsis thali...   142   8e-53
ref|XP_003559590.1| PREDICTED: probable ATP-dependent RNA helica...   141   7e-51

>ref|NP_001154411.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
           gi|332194213|gb|AEE32334.1| DEA(D/H)-box RNA helicase
           family protein [Arabidopsis thaliana]
          Length = 1206

 Score =  142 bits (359), Expect(2) = 8e-53
 Identities = 67/96 (69%), Positives = 83/96 (86%)
 Frame = -1

Query: 438 QQQAWQESEEGEKMQRFRRSLPSYNERDALLTMISQNQVVVITGETGCGKTTQVPQYILE 259
           +QQ W +S EG+KM  FR++LP+Y E+DALL  I+ NQVVV++GETGCGKTTQ+PQYILE
Sbjct: 279 KQQQWVDSPEGQKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILE 338

Query: 258 AEIKTERGAACSIICTQPRRISAMAVSERVAVERGK 151
           +EI+  RGA CSIICTQPRRISA++VSERVA ERG+
Sbjct: 339 SEIEAARGATCSIICTQPRRISAISVSERVAAERGE 374



 Score = 89.7 bits (221), Expect(2) = 8e-53
 Identities = 40/48 (83%), Positives = 47/48 (97%)
 Frame = -3

Query: 145 VGYKVHLEGIKGRDTRLLFCTTGILLRRLLVDRNLKGVSHIIVDEIHE 2
           VGYKV LEG++GRDTRLLFCTTG+LLRRLLVDR+LKGV+H++VDEIHE
Sbjct: 380 VGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVVDEIHE 427


>ref|XP_002894123.1| helicase domain-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297339965|gb|EFH70382.1| helicase
           domain-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1197

 Score =  144 bits (362), Expect(2) = 8e-53
 Identities = 67/96 (69%), Positives = 84/96 (87%)
 Frame = -1

Query: 438 QQQAWQESEEGEKMQRFRRSLPSYNERDALLTMISQNQVVVITGETGCGKTTQVPQYILE 259
           +QQ W +S EG+KM  FR++LP+Y E+DALL  I+ NQVVV++GETGCGKTTQ+PQYILE
Sbjct: 279 KQQQWVDSPEGQKMVEFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILE 338

Query: 258 AEIKTERGAACSIICTQPRRISAMAVSERVAVERGK 151
           +EI+  RGA+CSIICTQPRRISA++VSERVA ERG+
Sbjct: 339 SEIEAARGASCSIICTQPRRISAISVSERVAAERGE 374



 Score = 88.6 bits (218), Expect(2) = 8e-53
 Identities = 40/48 (83%), Positives = 46/48 (95%)
 Frame = -3

Query: 145 VGYKVHLEGIKGRDTRLLFCTTGILLRRLLVDRNLKGVSHIIVDEIHE 2
           VGYKV LEG+ GRDTRLLFCTTG+LLRRLLVDR+LKGV+H++VDEIHE
Sbjct: 380 VGYKVRLEGMTGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVVDEIHE 427


>ref|NP_175298.2| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
           gi|332194212|gb|AEE32333.1| DEA(D/H)-box RNA helicase
           family protein [Arabidopsis thaliana]
          Length = 1197

 Score =  142 bits (359), Expect(2) = 8e-53
 Identities = 67/96 (69%), Positives = 83/96 (86%)
 Frame = -1

Query: 438 QQQAWQESEEGEKMQRFRRSLPSYNERDALLTMISQNQVVVITGETGCGKTTQVPQYILE 259
           +QQ W +S EG+KM  FR++LP+Y E+DALL  I+ NQVVV++GETGCGKTTQ+PQYILE
Sbjct: 279 KQQQWVDSPEGQKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILE 338

Query: 258 AEIKTERGAACSIICTQPRRISAMAVSERVAVERGK 151
           +EI+  RGA CSIICTQPRRISA++VSERVA ERG+
Sbjct: 339 SEIEAARGATCSIICTQPRRISAISVSERVAAERGE 374



 Score = 89.7 bits (221), Expect(2) = 8e-53
 Identities = 40/48 (83%), Positives = 47/48 (97%)
 Frame = -3

Query: 145 VGYKVHLEGIKGRDTRLLFCTTGILLRRLLVDRNLKGVSHIIVDEIHE 2
           VGYKV LEG++GRDTRLLFCTTG+LLRRLLVDR+LKGV+H++VDEIHE
Sbjct: 380 VGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVVDEIHE 427


>gb|AAG60124.1|AC073555_8 hypothetical protein [Arabidopsis thaliana]
          Length = 1167

 Score =  142 bits (359), Expect(2) = 8e-53
 Identities = 67/96 (69%), Positives = 83/96 (86%)
 Frame = -1

Query: 438 QQQAWQESEEGEKMQRFRRSLPSYNERDALLTMISQNQVVVITGETGCGKTTQVPQYILE 259
           +QQ W +S EG+KM  FR++LP+Y E+DALL  I+ NQVVV++GETGCGKTTQ+PQYILE
Sbjct: 249 KQQQWVDSPEGQKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILE 308

Query: 258 AEIKTERGAACSIICTQPRRISAMAVSERVAVERGK 151
           +EI+  RGA CSIICTQPRRISA++VSERVA ERG+
Sbjct: 309 SEIEAARGATCSIICTQPRRISAISVSERVAAERGE 344



 Score = 89.7 bits (221), Expect(2) = 8e-53
 Identities = 40/48 (83%), Positives = 47/48 (97%)
 Frame = -3

Query: 145 VGYKVHLEGIKGRDTRLLFCTTGILLRRLLVDRNLKGVSHIIVDEIHE 2
           VGYKV LEG++GRDTRLLFCTTG+LLRRLLVDR+LKGV+H++VDEIHE
Sbjct: 350 VGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVVDEIHE 397


>ref|XP_003559590.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
           [Brachypodium distachyon]
          Length = 1121

 Score =  141 bits (356), Expect(2) = 7e-51
 Identities = 65/96 (67%), Positives = 85/96 (88%)
 Frame = -1

Query: 435 QQAWQESEEGEKMQRFRRSLPSYNERDALLTMISQNQVVVITGETGCGKTTQVPQYILEA 256
           Q++WQES EG KM  FR+SLP+Y E++ LL  I++NQV+VI+GETGCGKTTQ+PQ++LE+
Sbjct: 227 QRSWQESPEGVKMVEFRKSLPAYKEKERLLAAIARNQVIVISGETGCGKTTQLPQFVLES 286

Query: 255 EIKTERGAACSIICTQPRRISAMAVSERVAVERGKS 148
           EI++ RGA C+IICTQPRRISAMAVSERV+ ERG++
Sbjct: 287 EIESGRGAFCNIICTQPRRISAMAVSERVSTERGEN 322



 Score = 84.3 bits (207), Expect(2) = 7e-51
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = -3

Query: 145 VGYKVHLEGIKGRDTRLLFCTTGILLRRLLVDRNLKGVSHIIVDEIHE 2
           VGYKV LEG+KG+DT LLFCT+GILLRRLL DRNL GVSH+ VDEIHE
Sbjct: 327 VGYKVRLEGMKGKDTHLLFCTSGILLRRLLSDRNLNGVSHVFVDEIHE 374